RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 DLL1O00548 723 aa7.67□□□□□ -1.18
PRPF4B-207ENST00000490399 ADAM11O75078 769 aa7.67□□□□□ -1.18
PRPF4B-207ENST00000490399 XRCC5P13010 732 aaKnown RBP7.67□□□□□ -1.18
PRPF4B-207ENST00000490399 GSTM4Q03013 218 aa7.67□□□□□ -1.18
PRPF4B-207ENST00000490399 PTPN12Q05209 780 aaKnown RBP7.67□□□□□ -1.18
PRPF4B-207ENST00000490399 C19orf57Q0VDD7 668 aa7.67□□□□□ -1.18
PRPF4B-207ENST00000490399 FOXD4L6Q3SYB3 417 aaPredicted RBP7.67□□□□□ -1.18
PRPF4B-207ENST00000490399 FOXD4L3Q6VB84 417 aaPredicted RBP7.67□□□□□ -1.18
PRPF4B-207ENST00000490399 GPN3Q9UHW5 284 aaPredicted RBP7.67□□□□□ -1.18
PRPF4B-207ENST00000490399 B3GALT4O96024 378 aa7.66□□□□□ -1.18
PRPF4B-207ENST00000490399 CD68P34810 354 aaPredicted RBP7.66□□□□□ -1.18
PRPF4B-207ENST00000490399 RBM25P49756 843 aaKnown RBP7.66□□□□□ -1.18
PRPF4B-207ENST00000490399 MRPL58Q14197 206 aaKnown RBP7.66□□□□□ -1.18
PRPF4B-207ENST00000490399 RPS26P11Q5JNZ5 115 aaPredicted RBP7.66□□□□□ -1.18
PRPF4B-207ENST00000490399 ZMYM1Q5SVZ6 1142 aa7.66□□□□□ -1.18
PRPF4B-207ENST00000490399 KIAA1522Q9P206 1035 aaPredicted RBP7.66□□□□□ -1.18
PRPF4B-207ENST00000490399 TTF2Q9UNY4 1162 aaKnown RBP7.66□□□□□ -1.18
PRPF4B-207ENST00000490399 WISP1O95388 367 aa7.65□□□□□ -1.18
PRPF4B-207ENST00000490399 ARL4DP49703 201 aa7.65□□□□□ -1.18
PRPF4B-207ENST00000490399 KLHL23Q8NBE8 558 aa7.65□□□□□ -1.18
PRPF4B-207ENST00000490399 TP53INP1Q96A56 240 aa7.65□□□□□ -1.18
PRPF4B-207ENST00000490399 ECEL1O95672 775 aa7.64□□□□□ -1.19
PRPF4B-207ENST00000490399 NOS3P29474 1203 aa7.64□□□□□ -1.19
PRPF4B-207ENST00000490399 IREB2P48200 963 aaKnown RBP7.64□□□□□ -1.19
PRPF4B-207ENST00000490399 PRSS36Q5K4E3 855 aa7.64□□□□□ -1.19
PRPF4B-207ENST00000490399 LDLRAD1Q5T700 205 aa7.64□□□□□ -1.19
PRPF4B-207ENST00000490399 MAP4K3Q8IVH8 894 aa7.64□□□□□ -1.19
PRPF4B-207ENST00000490399 UBASH3BQ8TF42 649 aa7.64□□□□□ -1.19
PRPF4B-207ENST00000490399 WNT8BQ93098 351 aa7.64□□□□□ -1.19
PRPF4B-207ENST00000490399 MRRFQ96E11 262 aaKnown RBP7.64□□□□□ -1.19
PRPF4B-207ENST00000490399 TRIM56Q9BRZ2 755 aaKnown RBP7.64□□□□□ -1.19
PRPF4B-207ENST00000490399 USP26Q9BXU7 913 aa7.64□□□□□ -1.19
PRPF4B-207ENST00000490399 OSGEPQ9NPF4 335 aa7.64□□□□□ -1.19
PRPF4B-207ENST00000490399 ENC1O14682 589 aa7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 PAGE1O75459 146 aa7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 CELA3AP09093 270 aa7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 TSNAXIP1Q2TAA8 658 aa7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 STK35Q8TDR2 534 aa7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 WFDC12Q8WWY7 111 aa7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 CRELD1Q96HD1 420 aa7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 NECAB3Q96P71 396 aaPredicted RBP7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 SSBP4Q9BWG4 385 aaPredicted RBP7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 BACH2Q9BYV9 841 aa7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 ZFYVE1Q9HBF4 777 aa7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 SRA1Q9HD15 236 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 TMEM39AQ9NV64 488 aa7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 PPM1HQ9ULR3 514 aa7.63□□□□□ -1.19
PRPF4B-207ENST00000490399 ALX3O95076 343 aa7.62□□□□□ -1.19
PRPF4B-207ENST00000490399 CTSBP07858 339 aa7.62□□□□□ -1.19
PRPF4B-207ENST00000490399 TAF1CQ15572 869 aaPredicted RBP7.62□□□□□ -1.19
PRPF4B-207ENST00000490399 DUOXA2Q1HG44 320 aa7.62□□□□□ -1.19
PRPF4B-207ENST00000490399 IGF2-ASQ6U949 168 aa7.62□□□□□ -1.19
PRPF4B-207ENST00000490399 ZC3H12CQ9C0D7 883 aaKnown RBP7.62□□□□□ -1.19
PRPF4B-207ENST00000490399 SOX17Q9H6I2 414 aaPredicted RBP7.62□□□□□ -1.19
PRPF4B-207ENST00000490399 USP31Q70CQ4 1352 aa7.61□□□□□ -1.19
PRPF4B-207ENST00000490399 DLGAP3O95886 979 aa7.61□□□□□ -1.19
PRPF4B-207ENST00000490399 H2AFB1P0C5Y9 115 aa7.61□□□□□ -1.19
PRPF4B-207ENST00000490399 H2AFB2P0C5Z0 115 aa7.61□□□□□ -1.19
PRPF4B-207ENST00000490399 MAOBP27338 520 aa7.61□□□□□ -1.19
PRPF4B-207ENST00000490399 CCDC85BQ15834 202 aaPredicted RBP7.61□□□□□ -1.19
PRPF4B-207ENST00000490399 MAP3K11Q16584 847 aa7.61□□□□□ -1.19
PRPF4B-207ENST00000490399 AGGF1Q8N302 714 aaeCLIP7.61□□□□□ -1.197e-10■□□□□ 9.8
PRPF4B-207ENST00000490399 MEGF10Q96KG7 1140 aa7.61□□□□□ -1.19
PRPF4B-207ENST00000490399 NRSN2Q9GZP1 204 aa7.61□□□□□ -1.19
PRPF4B-207ENST00000490399 LOC100289279A0A1B0GTE1 492 aa7.6□□□□□ -1.19
PRPF4B-207ENST00000490399 SCO2A0A1W2PP80 73 aa7.6□□□□□ -1.19
PRPF4B-207ENST00000490399 F6X3S4 739 aa7.6□□□□□ -1.19
PRPF4B-207ENST00000490399 PPP2R3AQ06190 1150 aa7.6□□□□□ -1.19
PRPF4B-207ENST00000490399 POU4F3Q15319 338 aa7.6□□□□□ -1.19
PRPF4B-207ENST00000490399 RASIP1Q5U651 963 aa7.6□□□□□ -1.19
PRPF4B-207ENST00000490399 KIAA1211Q6ZU35 1233 aa7.6□□□□□ -1.19
PRPF4B-207ENST00000490399 ACAD11Q709F0 780 aa7.6□□□□□ -1.19
PRPF4B-207ENST00000490399 TMEM87AQ8NBN3 555 aa7.6□□□□□ -1.19
PRPF4B-207ENST00000490399 CEP44Q9C0F1 390 aa7.6□□□□□ -1.19
PRPF4B-207ENST00000490399 BCL11AQ9H165 835 aa7.6□□□□□ -1.19
PRPF4B-207ENST00000490399 RECKO95980 971 aa7.59□□□□□ -1.19
PRPF4B-207ENST00000490399 MPRIPQ6WCQ1 1025 aa7.59□□□□□ -1.19
PRPF4B-207ENST00000490399 SULF2Q8IWU5 870 aa7.59□□□□□ -1.19
PRPF4B-207ENST00000490399 DDX54Q8TDD1 881 aaKnown RBP7.59□□□□□ -1.19
PRPF4B-207ENST00000490399 MRPL18Q9H0U6 180 aaKnown RBP7.59□□□□□ -1.19
PRPF4B-207ENST00000490399 CYP11A1P05108 521 aa7.58□□□□□ -1.2
PRPF4B-207ENST00000490399 BMP6P22004 513 aa7.58□□□□□ -1.2
PRPF4B-207ENST00000490399 SV2BQ7L1I2 683 aa7.58□□□□□ -1.2
PRPF4B-207ENST00000490399 GRIN3AQ8TCU5 1115 aa7.58□□□□□ -1.2
PRPF4B-207ENST00000490399 CORO1BQ9BR76 489 aa7.58□□□□□ -1.2
PRPF4B-207ENST00000490399 AKTIPQ9H8T0 292 aa7.58□□□□□ -1.2
PRPF4B-207ENST00000490399 CBX8Q9HC52 389 aa7.58□□□□□ -1.2
PRPF4B-207ENST00000490399 F8W735 103 aaPredicted RBP7.57□□□□□ -1.2
PRPF4B-207ENST00000490399 NME2P22392 152 aa7.57□□□□□ -1.2
PRPF4B-207ENST00000490399 ARNTP27540 789 aa7.57□□□□□ -1.2
PRPF4B-207ENST00000490399 ITGAEP38570 1179 aa7.57□□□□□ -1.2
PRPF4B-207ENST00000490399 ST13P50502 369 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-207ENST00000490399 AP3B2Q13367 1082 aa7.57□□□□□ -1.2
PRPF4B-207ENST00000490399 PCNX4Q63HM2 1172 aa7.57□□□□□ -1.2
PRPF4B-207ENST00000490399 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-207ENST00000490399 PDZD3Q86UT5 571 aa7.57□□□□□ -1.2
PRPF4B-207ENST00000490399 DCAF11Q8TEB1 546 aa7.57□□□□□ -1.2
PRPF4B-207ENST00000490399 ANKRD24Q8TF21 1146 aa7.57□□□□□ -1.2
PRPF4B-207ENST00000490399 KCNB2Q92953 911 aa7.57□□□□□ -1.2
PRPF4B-207ENST00000490399 RUSC1Q9BVN2 902 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms