RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 NDUFB9Q9Y6M9 179 aa13.96□□□□□ -0.17
TRIM40-208ENST00000489892 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
TRIM40-208ENST00000489892 SLX4Q8IY92 1834 aa13.95□□□□□ -0.18
TRIM40-208ENST00000489892 GNAT2P19087 354 aa13.95□□□□□ -0.18
TRIM40-208ENST00000489892 PODNQ7Z5L7 613 aa13.95□□□□□ -0.18
TRIM40-208ENST00000489892 C7orf43Q8WVR3 580 aa13.95□□□□□ -0.18
TRIM40-208ENST00000489892 PSMD1Q99460 953 aa13.95□□□□□ -0.18
TRIM40-208ENST00000489892 LSG1Q9H089 658 aaKnown RBP13.95□□□□□ -0.18
TRIM40-208ENST00000489892 RAI14Q9P0K7 980 aa13.95□□□□□ -0.18
TRIM40-208ENST00000489892 ABCF2Q9UG63 623 aa13.95□□□□□ -0.18
TRIM40-208ENST00000489892 CACNA1SQ13698 1873 aa13.95□□□□□ -0.18
TRIM40-208ENST00000489892 RPAP1Q9BWH6 1393 aaPredicted RBP13.95□□□□□ -0.18
TRIM40-208ENST00000489892 FAM205AQ6ZU69 1335 aa13.94□□□□□ -0.18
TRIM40-208ENST00000489892 LDHCP07864 332 aa13.94□□□□□ -0.18
TRIM40-208ENST00000489892 KCNA3P22001 575 aa13.94□□□□□ -0.18
TRIM40-208ENST00000489892 KLRK1P26718 216 aa13.94□□□□□ -0.18
TRIM40-208ENST00000489892 HSPA4P34932 840 aa13.94□□□□□ -0.18
TRIM40-208ENST00000489892 MAP4K1Q92918 833 aa13.94□□□□□ -0.18
TRIM40-208ENST00000489892 AIDAQ96BJ3 306 aa13.94□□□□□ -0.18
TRIM40-208ENST00000489892 IL17RAQ96F46 866 aa13.94□□□□□ -0.18
TRIM40-208ENST00000489892 RNF181Q9P0P0 153 aa13.94□□□□□ -0.18
TRIM40-208ENST00000489892 IQSEC3Q9UPP2 1182 aaPredicted RBP13.94□□□□□ -0.18
TRIM40-208ENST00000489892 MAST2Q6P0Q8 1798 aa13.94□□□□□ -0.18
TRIM40-208ENST00000489892 MAST3O60307 1309 aa13.93□□□□□ -0.18
TRIM40-208ENST00000489892 ZNF532Q9HCE3 1301 aa13.93□□□□□ -0.18
TRIM40-208ENST00000489892 SBF1O95248 1867 aa13.93□□□□□ -0.18
TRIM40-208ENST00000489892 LDHBP07195 334 aaKnown RBP13.93□□□□□ -0.18
TRIM40-208ENST00000489892 CHAF1AQ13111 956 aaPredicted RBP13.93□□□□□ -0.18
TRIM40-208ENST00000489892 KRT32Q14532 448 aa13.93□□□□□ -0.18
TRIM40-208ENST00000489892 GSE1Q14687 1217 aa13.93□□□□□ -0.18
TRIM40-208ENST00000489892 NAA16Q6N069 864 aaPredicted RBP13.93□□□□□ -0.18
TRIM40-208ENST00000489892 TXNRD3Q86VQ6 643 aa13.93□□□□□ -0.18
TRIM40-208ENST00000489892 DZIP1Q86YF9 867 aaKnown RBP13.93□□□□□ -0.18
TRIM40-208ENST00000489892 MAGEB6Q8N7X4 407 aa13.93□□□□□ -0.18
TRIM40-208ENST00000489892 NOL10Q9BSC4 688 aaKnown RBP13.93□□□□□ -0.18
TRIM40-208ENST00000489892 NACAP1Q9BZK3 213 aa13.93□□□□□ -0.18
TRIM40-208ENST00000489892 COL1A1P02452 1464 aaPredicted RBP13.93□□□□□ -0.18
TRIM40-208ENST00000489892 C21orf2O43822 256 aa13.92□□□□□ -0.18
TRIM40-208ENST00000489892 ST18O60284 1047 aa13.92□□□□□ -0.18
TRIM40-208ENST00000489892 FKBP1AP62942 108 aaKnown RBP13.92□□□□□ -0.18
TRIM40-208ENST00000489892 KIAA2012Q0VF49 1180 aa13.92□□□□□ -0.18
TRIM40-208ENST00000489892 RBM46Q8TBY0 533 aaKnown RBP13.92□□□□□ -0.18
TRIM40-208ENST00000489892 ZMYM6O95789 1325 aa13.91□□□□□ -0.18
TRIM40-208ENST00000489892 CCDC88AQ3V6T2 1871 aa13.91□□□□□ -0.18
TRIM40-208ENST00000489892 TCRBV5S4A2TA0A5A2 114 aa13.91□□□□□ -0.18
TRIM40-208ENST00000489892 GPAA1O43292 621 aa13.91□□□□□ -0.18
TRIM40-208ENST00000489892 CYP7A1P22680 504 aa13.91□□□□□ -0.18
TRIM40-208ENST00000489892 PSMA5P28066 241 aa13.91□□□□□ -0.18
TRIM40-208ENST00000489892 ZNF589Q86UQ0 364 aaPredicted RBP13.91□□□□□ -0.18
TRIM40-208ENST00000489892 HSCBQ8IWL3 235 aa13.91□□□□□ -0.18
TRIM40-208ENST00000489892 OSBP2Q969R2 916 aa13.91□□□□□ -0.18
TRIM40-208ENST00000489892 SNX21Q969T3 373 aa13.91□□□□□ -0.18
TRIM40-208ENST00000489892 RBM8AQ9Y5S9 174 aaKnown RBP13.91□□□□□ -0.18
TRIM40-208ENST00000489892 SNED1Q8TER0 1413 aa13.9□□□□□ -0.18
TRIM40-208ENST00000489892 WTIPA6NIX2 430 aaPredicted RBP13.9□□□□□ -0.18
TRIM40-208ENST00000489892 RIMBP2O15034 1052 aa13.9□□□□□ -0.18
TRIM40-208ENST00000489892 BAG3O95817 575 aa13.9□□□□□ -0.18
TRIM40-208ENST00000489892 MCM2P49736 904 aa13.9□□□□□ -0.18
TRIM40-208ENST00000489892 MFSD14BQ5SR56 506 aa13.9□□□□□ -0.18
TRIM40-208ENST00000489892 KCNB2Q92953 911 aa13.9□□□□□ -0.18
TRIM40-208ENST00000489892 MAGEB6P1A0A0J9YX57 407 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 M0R2C6 588 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 PPIP5K2O43314 1243 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 HMGB1P09429 215 aaKnown RBP13.89□□□□□ -0.19
TRIM40-208ENST00000489892 HSPD1P10809 573 aaKnown RBP13.89□□□□□ -0.19
TRIM40-208ENST00000489892 PLCG2P16885 1265 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 PTMSP20962 102 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 SLC4A3P48751 1232 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 MECOMQ03112 1051 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 FSTL1Q12841 308 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 NECTIN1Q15223 517 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 IMMTQ16891 758 aaKnown RBP13.89□□□□□ -0.19
TRIM40-208ENST00000489892 TSGA10IPQ3SY00 556 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 STRIP1Q5VSL9 837 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 NSUN4Q96CB9 384 aaKnown RBP13.89□□□□□ -0.19
TRIM40-208ENST00000489892 TBC1D2Q9BYX2 928 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 TM6SF1Q9BZW5 370 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 IL25Q9H293 177 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
TRIM40-208ENST00000489892 MYO3BQ8WXR4 1341 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 LTBP3Q9NS15 1303 aa13.89□□□□□ -0.19
TRIM40-208ENST00000489892 TIAM2Q8IVF5 1701 aa13.88□□□□□ -0.19
TRIM40-208ENST00000489892 MBD4O95243 580 aa13.88□□□□□ -0.19
TRIM40-208ENST00000489892 PTH1RQ03431 593 aa13.88□□□□□ -0.19
TRIM40-208ENST00000489892 ALX1Q15699 326 aa13.88□□□□□ -0.19
TRIM40-208ENST00000489892 CREB3L3Q68CJ9 461 aa13.88□□□□□ -0.19
TRIM40-208ENST00000489892 TTLL5Q6EMB2 1281 aa13.88□□□□□ -0.19
TRIM40-208ENST00000489892 GIMAP6Q6P9H5 292 aa13.88□□□□□ -0.19
TRIM40-208ENST00000489892 GPR101Q96P66 508 aaPredicted RBP13.88□□□□□ -0.19
TRIM40-208ENST00000489892 STRBPQ96SI9 672 aaKnown RBP13.88□□□□□ -0.19
TRIM40-208ENST00000489892 SEC62Q99442 399 aaKnown RBP13.88□□□□□ -0.19
TRIM40-208ENST00000489892 CRNKL1Q9BZJ0 848 aaKnown RBP13.88□□□□□ -0.19
TRIM40-208ENST00000489892 PUS7LQ9H0K6 701 aaKnown RBP13.88□□□□□ -0.19
TRIM40-208ENST00000489892 TAOK3Q9H2K8 898 aa13.88□□□□□ -0.19
TRIM40-208ENST00000489892 CHMP5Q9NZZ3 219 aa13.88□□□□□ -0.19
TRIM40-208ENST00000489892 CIZ1Q9ULV3 898 aaPredicted RBP13.88□□□□□ -0.19
TRIM40-208ENST00000489892 ZC3H4Q9UPT8 1303 aaKnown RBP13.88□□□□□ -0.19
TRIM40-208ENST00000489892 USP17L3A6NCW0 530 aa13.87□□□□□ -0.19
TRIM40-208ENST00000489892 USP17L4A6NCW7 530 aa13.87□□□□□ -0.19
TRIM40-208ENST00000489892 ECE2O60344 883 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms