RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 GAKO14976 1311 aa13.21□□□□□ -0.29
TFF3-203ENST00000489676 TRIM6-TRIM34B2RNG4 842 aa13.21□□□□□ -0.29
TFF3-203ENST00000489676 IDH1O75874 414 aaKnown RBP13.21□□□□□ -0.29
TFF3-203ENST00000489676 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.29
TFF3-203ENST00000489676 PDE6AP16499 860 aa13.21□□□□□ -0.29
TFF3-203ENST00000489676 ADD2P35612 726 aa13.21□□□□□ -0.29
TFF3-203ENST00000489676 GMPSP49915 693 aaPredicted RBP13.21□□□□□ -0.29
TFF3-203ENST00000489676 SCNN1DP51172 638 aa13.21□□□□□ -0.29
TFF3-203ENST00000489676 MECOMQ03112 1051 aa13.21□□□□□ -0.29
TFF3-203ENST00000489676 SPTY2D1Q68D10 685 aaPredicted RBP13.21□□□□□ -0.29
TFF3-203ENST00000489676 ERICH6Q7L0X2 663 aa13.21□□□□□ -0.29
TFF3-203ENST00000489676 DPF2Q92785 391 aa13.21□□□□□ -0.29
TFF3-203ENST00000489676 FSD1Q9BTV5 496 aa13.21□□□□□ -0.29
TFF3-203ENST00000489676 LRP2BPQ9P2M1 347 aa13.21□□□□□ -0.29
TFF3-203ENST00000489676 MAST3O60307 1309 aa13.2□□□□□ -0.3
TFF3-203ENST00000489676 MAP3K12Q12852 859 aa13.2□□□□□ -0.3
TFF3-203ENST00000489676 DIXDC1Q155Q3 683 aa13.2□□□□□ -0.3
TFF3-203ENST00000489676 TMED8Q6PL24 325 aaPredicted RBP13.2□□□□□ -0.3
TFF3-203ENST00000489676 ADGRA1Q86SQ6 560 aa13.2□□□□□ -0.3
TFF3-203ENST00000489676 KIAA0825Q8IV33 1275 aa13.2□□□□□ -0.3
TFF3-203ENST00000489676 RILPL2Q969X0 211 aa13.2□□□□□ -0.3
TFF3-203ENST00000489676 L3MBTL3Q96JM7 780 aaPredicted RBP13.2□□□□□ -0.3
TFF3-203ENST00000489676 TTF2Q9UNY4 1162 aaKnown RBP13.2□□□□□ -0.3
TFF3-203ENST00000489676 ECM29Q5VYK3 1845 aa13.2□□□□□ -0.3
TFF3-203ENST00000489676 MROH7-TTC4A0A0A0MT08 1334 aa13.19□□□□□ -0.3
TFF3-203ENST00000489676 SCN4AP35499 1836 aa13.19□□□□□ -0.3
TFF3-203ENST00000489676 SHTN1A0MZ66 631 aa13.19□□□□□ -0.3
TFF3-203ENST00000489676 DDNO94850 711 aaPredicted RBP13.19□□□□□ -0.3
TFF3-203ENST00000489676 ZNF280AP59817 542 aaPredicted RBP13.19□□□□□ -0.3
TFF3-203ENST00000489676 HDLBPQ00341 1268 aaKnown RBP13.19□□□□□ -0.3
TFF3-203ENST00000489676 UBE3CQ15386 1083 aa13.19□□□□□ -0.3
TFF3-203ENST00000489676 SLFNL1Q499Z3 407 aa13.19□□□□□ -0.3
TFF3-203ENST00000489676 SLC9C2Q5TAH2 1124 aa13.19□□□□□ -0.3
TFF3-203ENST00000489676 DZIP1Q86YF9 867 aaKnown RBP13.19□□□□□ -0.3
TFF3-203ENST00000489676 MAGEB6Q8N7X4 407 aa13.19□□□□□ -0.3
TFF3-203ENST00000489676 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.19□□□□□ -0.3
TFF3-203ENST00000489676 RAI14Q9P0K7 980 aa13.19□□□□□ -0.3
TFF3-203ENST00000489676 GJA3Q9Y6H8 435 aa13.19□□□□□ -0.3
TFF3-203ENST00000489676 DDX60LQ5H9U9 1706 aaKnown RBP13.19□□□□□ -0.3
TFF3-203ENST00000489676 CDK5RAP2Q96SN8 1893 aa13.19□□□□□ -0.3
TFF3-203ENST00000489676 ZNF532Q9HCE3 1301 aa13.18□□□□□ -0.3
TFF3-203ENST00000489676 A0A0D9SFI3 127 aa13.18□□□□□ -0.3
TFF3-203ENST00000489676 GLTPD2A6NH11 291 aa13.18□□□□□ -0.3
TFF3-203ENST00000489676 F8W031 263 aaPredicted RBP13.18□□□□□ -0.3
TFF3-203ENST00000489676 RNF113AO15541 343 aaKnown RBP13.18□□□□□ -0.3
TFF3-203ENST00000489676 ZFYP08048 801 aaPredicted RBP13.18□□□□□ -0.3
TFF3-203ENST00000489676 CHMLP26374 656 aa13.18□□□□□ -0.3
TFF3-203ENST00000489676 ZMYM1Q5SVZ6 1142 aa13.18□□□□□ -0.3
TFF3-203ENST00000489676 NAA16Q6N069 864 aaPredicted RBP13.18□□□□□ -0.3
TFF3-203ENST00000489676 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
TFF3-203ENST00000489676 ZBED3Q96IU2 234 aaPredicted RBP13.18□□□□□ -0.3
TFF3-203ENST00000489676 MRIQ9BWK5 157 aa13.18□□□□□ -0.3
TFF3-203ENST00000489676 GPRC5DQ9NZD1 345 aa13.18□□□□□ -0.3
TFF3-203ENST00000489676 SERPINA10Q9UK55 444 aa13.18□□□□□ -0.3
TFF3-203ENST00000489676 DAGLAQ9Y4D2 1042 aa13.18□□□□□ -0.3
TFF3-203ENST00000489676 FOCADQ5VW36 1801 aa13.18□□□□□ -0.3
TFF3-203ENST00000489676 USP17L8P0C7I0 530 aa13.17□□□□□ -0.3
TFF3-203ENST00000489676 CRKP46108 304 aa13.17□□□□□ -0.3
TFF3-203ENST00000489676 MMP14P50281 582 aa13.17□□□□□ -0.3
TFF3-203ENST00000489676 ZSCAN25Q6NSZ9 544 aa13.17□□□□□ -0.3
TFF3-203ENST00000489676 HHIPL2Q6UWX4 724 aa13.17□□□□□ -0.3
TFF3-203ENST00000489676 MTMR14Q8NCE2 650 aa13.17□□□□□ -0.3
TFF3-203ENST00000489676 APPBP2Q92624 585 aa13.17□□□□□ -0.3
TFF3-203ENST00000489676 OSBP2Q969R2 916 aa13.17□□□□□ -0.3
TFF3-203ENST00000489676 FAM227BQ96M60 508 aa13.17□□□□□ -0.3
TFF3-203ENST00000489676 RIOK1Q9BRS2 568 aaKnown RBP13.17□□□□□ -0.3
TFF3-203ENST00000489676 IL25Q9H293 177 aa13.17□□□□□ -0.3
TFF3-203ENST00000489676 PCDHAC2Q9Y5I4 1007 aa13.17□□□□□ -0.3
TFF3-203ENST00000489676 HIP1O00291 1037 aa13.16□□□□□ -0.3
TFF3-203ENST00000489676 CDC45O75419 566 aa13.16□□□□□ -0.3
TFF3-203ENST00000489676 EGFRP00533 1210 aa13.16□□□□□ -0.3
TFF3-203ENST00000489676 CYP7A1P22680 504 aa13.16□□□□□ -0.3
TFF3-203ENST00000489676 GSTO1P78417 241 aa13.16□□□□□ -0.3
TFF3-203ENST00000489676 NMIQ13287 307 aaPredicted RBP13.16□□□□□ -0.3
TFF3-203ENST00000489676 LRRFIP1Q32MZ4 808 aaKnown RBP13.16□□□□□ -0.3
TFF3-203ENST00000489676 DPY19L2Q6NUT2 758 aa13.16□□□□□ -0.3
TFF3-203ENST00000489676 MICALL2Q8IY33 904 aa13.16□□□□□ -0.3
TFF3-203ENST00000489676 TEKT1Q969V4 418 aa13.16□□□□□ -0.3
TFF3-203ENST00000489676 ZDHHC15Q96MV8 337 aa13.16□□□□□ -0.3
TFF3-203ENST00000489676 RAD50Q92878 1312 aa13.15□□□□□ -0.3
TFF3-203ENST00000489676 GPR75-ASB3A0A0A6YYF3 556 aa13.15□□□□□ -0.3
TFF3-203ENST00000489676 SPDYE2BA6NHP3 402 aa13.15□□□□□ -0.3
TFF3-203ENST00000489676 M0R2C6 588 aa13.15□□□□□ -0.3
TFF3-203ENST00000489676 SPDYE6P0CI01 402 aa13.15□□□□□ -0.3
TFF3-203ENST00000489676 EPS15P42566 896 aa13.15□□□□□ -0.3
TFF3-203ENST00000489676 RHBDL3P58872 404 aa13.15□□□□□ -0.3
TFF3-203ENST00000489676 APOBEC3HQ6NTF7 200 aaKnown RBP13.15□□□□□ -0.3
TFF3-203ENST00000489676 SLF2Q8IX21 1173 aa13.15□□□□□ -0.3
TFF3-203ENST00000489676 SEC62Q99442 399 aaKnown RBP13.15□□□□□ -0.3
TFF3-203ENST00000489676 PUS7LQ9H0K6 701 aaKnown RBP13.15□□□□□ -0.3
TFF3-203ENST00000489676 MYOZ2Q9NPC6 264 aa13.15□□□□□ -0.3
TFF3-203ENST00000489676 DIAPH3Q9NSV4 1193 aa13.15□□□□□ -0.3
TFF3-203ENST00000489676 CNOT7Q9UIV1 285 aaKnown RBP13.15□□□□□ -0.3
TFF3-203ENST00000489676 HDAC9Q9UKV0 1011 aa13.15□□□□□ -0.3
TFF3-203ENST00000489676 POTECB2RU33 542 aa13.14□□□□□ -0.31
TFF3-203ENST00000489676 LDHCP07864 332 aa13.14□□□□□ -0.31
TFF3-203ENST00000489676 PPP4CP60510 307 aa13.14□□□□□ -0.31
TFF3-203ENST00000489676 CFAP100Q494V2 611 aa13.14□□□□□ -0.31
TFF3-203ENST00000489676 C8orf34Q49A92 452 aa13.14□□□□□ -0.31
TFF3-203ENST00000489676 ZNF589Q86UQ0 364 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms