RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 SNAPC2Q13487 334 aa19.64■□□□□ 0.73
UFD1-209ENST00000489406 MAFAQ8NHW3 353 aaPredicted RBP19.64■□□□□ 0.73
UFD1-209ENST00000489406 CDC5LQ99459 802 aaKnown RBP19.64■□□□□ 0.73
UFD1-209ENST00000489406 CRISPLD2Q9H0B8 497 aa19.64■□□□□ 0.73
UFD1-209ENST00000489406 BSDC1Q9NW68 430 aaPredicted RBP19.64■□□□□ 0.73
UFD1-209ENST00000489406 PRUNE2Q8WUY3 3088 aa19.64■□□□□ 0.73
UFD1-209ENST00000489406 IRF6O14896 467 aa19.63■□□□□ 0.73
UFD1-209ENST00000489406 LEMD3Q9Y2U8 911 aa19.63■□□□□ 0.73
UFD1-209ENST00000489406 KRT24Q2M2I5 525 aa19.62■□□□□ 0.73
UFD1-209ENST00000489406 TEPSINQ96N21 525 aa19.62■□□□□ 0.73
UFD1-209ENST00000489406 ADGRA2Q96PE1 1338 aa19.61■□□□□ 0.73
UFD1-209ENST00000489406 TNFRSF10AO00220 468 aa19.61■□□□□ 0.73
UFD1-209ENST00000489406 HOXD11P31277 338 aaPredicted RBP19.61■□□□□ 0.73
UFD1-209ENST00000489406 FCGRTP55899 365 aa19.61■□□□□ 0.73
UFD1-209ENST00000489406 TNFAIP1Q13829 316 aa19.61■□□□□ 0.73
UFD1-209ENST00000489406 ERO1BQ86YB8 467 aa19.61■□□□□ 0.73
UFD1-209ENST00000489406 CDX2Q99626 313 aaPredicted RBP19.61■□□□□ 0.73
UFD1-209ENST00000489406 CD209Q9NNX6 404 aa19.61■□□□□ 0.73
UFD1-209ENST00000489406 PAK6Q9NQU5 681 aaPredicted RBP19.61■□□□□ 0.73
UFD1-209ENST00000489406 SNCAIPQ9Y6H5 919 aa19.61■□□□□ 0.73
UFD1-209ENST00000489406 PCCAP05165 728 aaPredicted RBP19.6■□□□□ 0.73
UFD1-209ENST00000489406 ZNF70Q9UC06 446 aaPredicted RBP19.6■□□□□ 0.73
UFD1-209ENST00000489406 MUC3AQ02505 3323 aa19.6■□□□□ 0.73
UFD1-209ENST00000489406 FAM205AQ6ZU69 1335 aa19.59■□□□□ 0.73
UFD1-209ENST00000489406 TMEM265A0A087WTH1 108 aa19.59■□□□□ 0.73
UFD1-209ENST00000489406 PDHXO00330 501 aa19.59■□□□□ 0.73
UFD1-209ENST00000489406 ZNF697Q5TEC3 545 aa19.59■□□□□ 0.73
UFD1-209ENST00000489406 PLEKHF1Q96S99 279 aa19.59■□□□□ 0.73
UFD1-209ENST00000489406 TMEM39BQ9GZU3 492 aa19.59■□□□□ 0.73
UFD1-209ENST00000489406 SPEF2Q9C093 1822 aa19.58■□□□□ 0.73
UFD1-209ENST00000489406 PPP2R1AP30153 589 aa19.58■□□□□ 0.72
UFD1-209ENST00000489406 FLT3LGP49771 235 aa19.58■□□□□ 0.72
UFD1-209ENST00000489406 PPIL2Q13356 520 aa19.58■□□□□ 0.72
UFD1-209ENST00000489406 SPDYE2Q495Y8 402 aa19.58■□□□□ 0.72
UFD1-209ENST00000489406 HDGFL1Q5TGJ6 251 aa19.58■□□□□ 0.72
UFD1-209ENST00000489406 RIC3Q7Z5B4 369 aa19.58■□□□□ 0.72
UFD1-209ENST00000489406 ANKRD23Q86SG2 305 aa19.58■□□□□ 0.72
UFD1-209ENST00000489406 ZKSCAN4Q969J2 545 aaPredicted RBP19.58■□□□□ 0.72
UFD1-209ENST00000489406 TDRD3Q9H7E2 651 aaKnown RBP19.58■□□□□ 0.72
UFD1-209ENST00000489406 TCP10L2B9ZVM9 353 aa19.57■□□□□ 0.72
UFD1-209ENST00000489406 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.57■□□□□ 0.72
UFD1-209ENST00000489406 MYD88Q99836 296 aa19.57■□□□□ 0.72
UFD1-209ENST00000489406 NBPF3Q9H094 633 aa19.57■□□□□ 0.72
UFD1-209ENST00000489406 BABAM1Q9NWV8 329 aa19.57■□□□□ 0.72
UFD1-209ENST00000489406 DBF4Q9UBU7 674 aaPredicted RBP19.57■□□□□ 0.72
UFD1-209ENST00000489406 LAMA2P24043 3122 aaKnown RBP19.57■□□□□ 0.72
UFD1-209ENST00000489406 CTSWP56202 376 aa19.56■□□□□ 0.72
UFD1-209ENST00000489406 MDM2Q00987 491 aaPredicted RBP19.56■□□□□ 0.72
UFD1-209ENST00000489406 ANKLE1Q8NAG6 615 aa19.56■□□□□ 0.72
UFD1-209ENST00000489406 PXYLP1Q8TE99 480 aa19.56■□□□□ 0.72
UFD1-209ENST00000489406 GREM2Q9H772 168 aa19.56■□□□□ 0.72
UFD1-209ENST00000489406 JAG2Q9Y219 1238 aa19.56■□□□□ 0.72
UFD1-209ENST00000489406 CCDC191Q8NCU4 936 aa19.55■□□□□ 0.72
UFD1-209ENST00000489406 WRNIP1Q96S55 665 aa19.55■□□□□ 0.72
UFD1-209ENST00000489406 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.55■□□□□ 0.72
UFD1-209ENST00000489406 HYPKQ9NX55 129 aa19.55■□□□□ 0.72
UFD1-209ENST00000489406 TAOK2Q9UL54 1235 aa19.55■□□□□ 0.72
UFD1-209ENST00000489406 BCRP11274 1271 aa19.54■□□□□ 0.72
UFD1-209ENST00000489406 KCNJ4P48050 445 aa19.54■□□□□ 0.72
UFD1-209ENST00000489406 TTLL11Q8NHH1 800 aa19.54■□□□□ 0.72
UFD1-209ENST00000489406 MYLIPQ8WY64 445 aa19.54■□□□□ 0.72
UFD1-209ENST00000489406 C11orf49Q9H6J7 331 aa19.54■□□□□ 0.72
UFD1-209ENST00000489406 CWC25Q9NXE8 425 aaPredicted RBP19.54■□□□□ 0.72
UFD1-209ENST00000489406 TNNI2P48788 182 aa19.53■□□□□ 0.72
UFD1-209ENST00000489406 ANKRD2Q9GZV1 360 aa19.53■□□□□ 0.72
UFD1-209ENST00000489406 MGAMO43451 1857 aa19.53■□□□□ 0.72
UFD1-209ENST00000489406 MAPK8IP3Q9UPT6 1336 aa19.52■□□□□ 0.72
UFD1-209ENST00000489406 CYP2C8P10632 490 aa19.52■□□□□ 0.72
UFD1-209ENST00000489406 GOLGA2Q08379 1002 aa19.52■□□□□ 0.72
UFD1-209ENST00000489406 MAP3K12Q12852 859 aa19.52■□□□□ 0.72
UFD1-209ENST00000489406 TJAP1Q5JTD0 557 aa19.52■□□□□ 0.72
UFD1-209ENST00000489406 SEMA6BQ9H3T3 888 aa19.52■□□□□ 0.72
UFD1-209ENST00000489406 COL2A1P02458 1487 aaPredicted RBP19.52■□□□□ 0.72
UFD1-209ENST00000489406 SNAP23O00161 211 aa19.51■□□□□ 0.71
UFD1-209ENST00000489406 IGHMBP2P38935 993 aaKnown RBP19.51■□□□□ 0.71
UFD1-209ENST00000489406 FKBP1AP62942 108 aaKnown RBP19.51■□□□□ 0.71
UFD1-209ENST00000489406 PPATQ06203 517 aa19.51■□□□□ 0.71
UFD1-209ENST00000489406 IRF5Q13568 498 aa19.51■□□□□ 0.71
UFD1-209ENST00000489406 RIPK4P57078 832 aa19.5■□□□□ 0.71
UFD1-209ENST00000489406 PARK7Q99497 189 aaKnown RBP19.5■□□□□ 0.71
UFD1-209ENST00000489406 ARAP2Q8WZ64 1704 aa19.49■□□□□ 0.71
UFD1-209ENST00000489406 TNPO2O14787 897 aaKnown RBP19.49■□□□□ 0.71
UFD1-209ENST00000489406 DZIP1LQ8IYY4 767 aaKnown RBP19.49■□□□□ 0.71
UFD1-209ENST00000489406 DDX60LQ5H9U9 1706 aaKnown RBP19.48■□□□□ 0.71
UFD1-209ENST00000489406 IL1R1P14778 569 aa19.48■□□□□ 0.71
UFD1-209ENST00000489406 FOSL2P15408 326 aa19.48■□□□□ 0.71
UFD1-209ENST00000489406 MOGSQ13724 837 aa19.48■□□□□ 0.71
UFD1-209ENST00000489406 PHAXQ9H814 394 aaKnown RBP19.48■□□□□ 0.71
UFD1-209ENST00000489406 CHRNDQ07001 517 aa19.47■□□□□ 0.71
UFD1-209ENST00000489406 SERPINA10Q9UK55 444 aa19.47■□□□□ 0.71
UFD1-209ENST00000489406 TTF2Q9UNY4 1162 aaKnown RBP19.47■□□□□ 0.71
UFD1-209ENST00000489406 LAS1LQ9Y4W2 734 aaKnown RBP19.47■□□□□ 0.71
UFD1-209ENST00000489406 PFASO15067 1338 aa19.47■□□□□ 0.71
UFD1-209ENST00000489406 CACNB3P54284 484 aa19.46■□□□□ 0.71
UFD1-209ENST00000489406 ZNF804AQ7Z570 1209 aa19.46■□□□□ 0.71
UFD1-209ENST00000489406 MPHOSPH8Q99549 860 aa19.46■□□□□ 0.71
UFD1-209ENST00000489406 KCNH4Q9UQ05 1017 aa19.46■□□□□ 0.71
UFD1-209ENST00000489406 TAF5LO75529 589 aa19.45■□□□□ 0.7
UFD1-209ENST00000489406 INPP5BP32019 993 aa19.45■□□□□ 0.7
UFD1-209ENST00000489406 GPAT2Q6NUI2 795 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms