RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 VGLL4Q14135 290 aa8.26□□□□□ -1.09
PTCH1-211ENST00000488809 LDHAL6AQ6ZMR3 332 aa8.26□□□□□ -1.09
PTCH1-211ENST00000488809 TSPYL6Q8N831 410 aa8.26□□□□□ -1.09
PTCH1-211ENST00000488809 HELBQ8NG08 1087 aaPredicted RBP8.26□□□□□ -1.09
PTCH1-211ENST00000488809 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.26□□□□□ -1.09
PTCH1-211ENST00000488809 BRI3BPQ8WY22 251 aa8.26□□□□□ -1.09
PTCH1-211ENST00000488809 HTATIP2Q9BUP3 242 aa8.26□□□□□ -1.09
PTCH1-211ENST00000488809 TDRD3Q9H7E2 651 aaKnown RBP8.26□□□□□ -1.09
PTCH1-211ENST00000488809 JAG2Q9Y219 1238 aa8.26□□□□□ -1.09
PTCH1-211ENST00000488809 PCDHAC2Q9Y5I4 1007 aa8.26□□□□□ -1.09
PTCH1-211ENST00000488809 SPDYE5A6NIY4 337 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 TCP10L2B9ZVM9 353 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 H0YGN5 161 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 PLIN1O60240 522 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 MYCP01106 439 aaPredicted RBP8.25□□□□□ -1.09
PTCH1-211ENST00000488809 HIBADHP31937 336 aaKnown RBP8.25□□□□□ -1.09
PTCH1-211ENST00000488809 CRKP46108 304 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 CASP7P55210 303 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 LACTBP83111 547 aaPredicted RBP8.25□□□□□ -1.09
PTCH1-211ENST00000488809 SNAPC2Q13487 334 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 UBE4AQ14139 1066 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 DCAF15Q66K64 600 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.25□□□□□ -1.09
PTCH1-211ENST00000488809 G2E3Q7L622 706 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 VPS37DQ86XT2 251 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 ERO1BQ86YB8 467 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 DZIP1LQ8IYY4 767 aaKnown RBP8.25□□□□□ -1.09
PTCH1-211ENST00000488809 FAM43AQ8N2R8 423 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 SH3TC2Q8TF17 1288 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 TBC1D22AQ8WUA7 517 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 DPF3Q92784 378 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 TSR2Q969E8 191 aaKnown RBP8.25□□□□□ -1.09
PTCH1-211ENST00000488809 MAST3O60307 1309 aa8.25□□□□□ -1.09
PTCH1-211ENST00000488809 SNAP23O00161 211 aa8.24□□□□□ -1.09
PTCH1-211ENST00000488809 FRAT2O75474 233 aaPredicted RBP8.24□□□□□ -1.09
PTCH1-211ENST00000488809 CAPN2P17655 700 aa8.24□□□□□ -1.09
PTCH1-211ENST00000488809 UBXN2AP68543 259 aa8.24□□□□□ -1.09
PTCH1-211ENST00000488809 HDLBPQ00341 1268 aaKnown RBP8.24□□□□□ -1.09
PTCH1-211ENST00000488809 PPIL2Q13356 520 aa8.24□□□□□ -1.09
PTCH1-211ENST00000488809 CCDC27Q2M243 656 aa8.24□□□□□ -1.09
PTCH1-211ENST00000488809 CHRDL2Q6WN34 429 aa8.24□□□□□ -1.09
PTCH1-211ENST00000488809 TDRD7Q8NHU6 1098 aaKnown RBP8.24□□□□□ -1.09
PTCH1-211ENST00000488809 RAET1EQ8TD07 263 aa8.24□□□□□ -1.09
PTCH1-211ENST00000488809 TEKT1Q969V4 418 aa8.24□□□□□ -1.09
PTCH1-211ENST00000488809 TEPSINQ96N21 525 aa8.24□□□□□ -1.09
PTCH1-211ENST00000488809 WRNIP1Q96S55 665 aa8.24□□□□□ -1.09
PTCH1-211ENST00000488809 TMEM39BQ9GZU3 492 aa8.24□□□□□ -1.09
PTCH1-211ENST00000488809 NR2E3Q9Y5X4 410 aa8.24□□□□□ -1.09
PTCH1-211ENST00000488809 IL16Q14005 1332 aa8.24□□□□□ -1.09
PTCH1-211ENST00000488809 SZT2Q5T011 3432 aa8.23□□□□□ -1.09
PTCH1-211ENST00000488809 RPAP1Q9BWH6 1393 aaPredicted RBP8.23□□□□□ -1.09
PTCH1-211ENST00000488809 BTBD19C9JJ37 291 aa8.23□□□□□ -1.09
PTCH1-211ENST00000488809 GRK4P32298 578 aa8.23□□□□□ -1.09
PTCH1-211ENST00000488809 FOXO4P98177 505 aa8.23□□□□□ -1.09
PTCH1-211ENST00000488809 PPATQ06203 517 aa8.23□□□□□ -1.09
PTCH1-211ENST00000488809 CAVIN4Q5BKX8 364 aa8.23□□□□□ -1.09
PTCH1-211ENST00000488809 LMBR1LQ6UX01 489 aa8.23□□□□□ -1.09
PTCH1-211ENST00000488809 FAM83AQ86UY5 434 aa8.23□□□□□ -1.09
PTCH1-211ENST00000488809 CNKSR2Q8WXI2 1034 aa8.23□□□□□ -1.09
PTCH1-211ENST00000488809 TRIM47Q96LD4 638 aa8.23□□□□□ -1.09
PTCH1-211ENST00000488809 PRKRIP1Q9H875 184 aaPredicted RBP8.23□□□□□ -1.09
PTCH1-211ENST00000488809 C9orf78Q9NZ63 289 aaPredicted RBP8.23□□□□□ -1.09
PTCH1-211ENST00000488809 DOCK2Q92608 1830 aa8.23□□□□□ -1.09
PTCH1-211ENST00000488809 AOX1Q06278 1338 aa8.23□□□□□ -1.09
PTCH1-211ENST00000488809 MROH5Q6ZUA9 1318 aa8.23□□□□□ -1.09
PTCH1-211ENST00000488809 A0A1W2PPC1 479 aa8.22□□□□□ -1.09
PTCH1-211ENST00000488809 GRM8O00222 908 aa8.22□□□□□ -1.09
PTCH1-211ENST00000488809 IRF6O14896 467 aa8.22□□□□□ -1.09
PTCH1-211ENST00000488809 FMNL1O95466 1100 aaPredicted RBP8.22□□□□□ -1.09
PTCH1-211ENST00000488809 PSMC4P43686 418 aa8.22□□□□□ -1.09
PTCH1-211ENST00000488809 GYG1P46976 350 aa8.22□□□□□ -1.09
PTCH1-211ENST00000488809 GJA8P48165 433 aa8.22□□□□□ -1.09
PTCH1-211ENST00000488809 CAP1Q01518 475 aa8.22□□□□□ -1.09
PTCH1-211ENST00000488809 FKBP1CQ5VVH2 108 aa8.22□□□□□ -1.09
PTCH1-211ENST00000488809 ANKRD23Q86SG2 305 aa8.22□□□□□ -1.09
PTCH1-211ENST00000488809 ZNF341Q9BYN7 854 aa8.22□□□□□ -1.09
PTCH1-211ENST00000488809 BIN2Q9UBW5 565 aaPredicted RBP8.22□□□□□ -1.09
PTCH1-211ENST00000488809 SRRDQ9UH36 339 aa8.22□□□□□ -1.09
PTCH1-211ENST00000488809 SNCAIPQ9Y6H5 919 aa8.22□□□□□ -1.09
PTCH1-211ENST00000488809 MYPNQ86TC9 1320 aa8.22□□□□□ -1.09
PTCH1-211ENST00000488809 PTPRFP10586 1907 aa8.21□□□□□ -1.09
PTCH1-211ENST00000488809 GJB1P08034 283 aa8.21□□□□□ -1.1
PTCH1-211ENST00000488809 CHAF1AQ13111 956 aaPredicted RBP8.21□□□□□ -1.1
PTCH1-211ENST00000488809 NCBP3Q53F19 620 aaKnown RBP8.21□□□□□ -1.1
PTCH1-211ENST00000488809 BEND3Q5T5X7 828 aa8.21□□□□□ -1.1
PTCH1-211ENST00000488809 C17orf99Q6UX52 265 aa8.21□□□□□ -1.1
PTCH1-211ENST00000488809 WWC1Q8IX03 1113 aa8.21□□□□□ -1.1
PTCH1-211ENST00000488809 SLAIN1Q8ND83 568 aa8.21□□□□□ -1.1
PTCH1-211ENST00000488809 SLC17A8Q8NDX2 589 aa8.21□□□□□ -1.1
PTCH1-211ENST00000488809 ZKSCAN4Q969J2 545 aaPredicted RBP8.21□□□□□ -1.1
PTCH1-211ENST00000488809 ZNF594Q96JF6 807 aaPredicted RBP8.21□□□□□ -1.1
PTCH1-211ENST00000488809 FAM84BQ96KN1 310 aaPredicted RBP8.21□□□□□ -1.1
PTCH1-211ENST00000488809 ZDHHC15Q96MV8 337 aa8.21□□□□□ -1.1
PTCH1-211ENST00000488809 PARK7Q99497 189 aaKnown RBP8.21□□□□□ -1.1
PTCH1-211ENST00000488809 MRIQ9BWK5 157 aa8.21□□□□□ -1.1
PTCH1-211ENST00000488809 ARHGAP39Q9C0H5 1083 aa8.21□□□□□ -1.1
PTCH1-211ENST00000488809 RNF208Q9H0X6 261 aa8.21□□□□□ -1.1
PTCH1-211ENST00000488809 RBM27Q9P2N5 1060 aaKnown RBP8.21□□□□□ -1.1
PTCH1-211ENST00000488809 SUGT1Q9Y2Z0 365 aa8.21□□□□□ -1.1
PTCH1-211ENST00000488809 RIPOR2Q9Y4F9 1068 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms