RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 USP17L8P0C7I0 530 aa23.45■■□□□ 1.34
CCM2-216ENST00000488727 RRAGCQ9HB90 399 aa23.45■■□□□ 1.34
CCM2-216ENST00000488727 PIH1D3Q9NQM4 214 aaKnown RBP23.45■■□□□ 1.34
CCM2-216ENST00000488727 ERC2O15083 957 aa23.45■■□□□ 1.34
CCM2-216ENST00000488727 BMP2KLQ5H9B9 411 aa23.45■■□□□ 1.34
CCM2-216ENST00000488727 ZGPATQ8N5A5 531 aaKnown RBP23.45■■□□□ 1.34
CCM2-216ENST00000488727 TTF2Q9UNY4 1162 aaKnown RBP23.45■■□□□ 1.34
CCM2-216ENST00000488727 GOLIM4O00461 696 aa23.44■■□□□ 1.34
CCM2-216ENST00000488727 GLRX3O76003 335 aaKnown RBP23.44■■□□□ 1.34
CCM2-216ENST00000488727 LMOD1P29536 600 aaPredicted RBP23.44■■□□□ 1.34
CCM2-216ENST00000488727 ZNF280AP59817 542 aaPredicted RBP23.44■■□□□ 1.34
CCM2-216ENST00000488727 BECN1Q14457 450 aa23.44■■□□□ 1.34
CCM2-216ENST00000488727 OSBPL3Q9H4L5 887 aa23.44■■□□□ 1.34
CCM2-216ENST00000488727 HACL1Q9UJ83 578 aa23.44■■□□□ 1.34
CCM2-216ENST00000488727 SUGT1Q9Y2Z0 365 aa23.44■■□□□ 1.34
CCM2-216ENST00000488727 EGFRP00533 1210 aa23.43■■□□□ 1.34
CCM2-216ENST00000488727 LDHBP07195 334 aaKnown RBP23.43■■□□□ 1.34
CCM2-216ENST00000488727 SLC4A3P48751 1232 aa23.43■■□□□ 1.34
CCM2-216ENST00000488727 PAG1Q9NWQ8 432 aa23.43■■□□□ 1.34
CCM2-216ENST00000488727 MAST2Q6P0Q8 1798 aa23.43■■□□□ 1.34
CCM2-216ENST00000488727 AOX1Q06278 1338 aa23.43■■□□□ 1.34
CCM2-216ENST00000488727 ZNF384Q8TF68 577 aa23.42■■□□□ 1.34
CCM2-216ENST00000488727 IQCA1LA6NCM1 817 aa23.42■■□□□ 1.34
CCM2-216ENST00000488727 MAP4K4O95819 1239 aaPredicted RBP23.42■■□□□ 1.34
CCM2-216ENST00000488727 SAMD7Q7Z3H4 446 aa23.42■■□□□ 1.34
CCM2-216ENST00000488727 OGFOD1Q8N543 542 aa23.42■■□□□ 1.34
CCM2-216ENST00000488727 GPBP1L1Q9HC44 474 aaPredicted RBP23.42■■□□□ 1.34
CCM2-216ENST00000488727 LRP2BPQ9P2M1 347 aa23.42■■□□□ 1.34
CCM2-216ENST00000488727 MYH2Q9UKX2 1941 aa23.42■■□□□ 1.34
CCM2-216ENST00000488727 H7C1D1 291 aa23.41■■□□□ 1.34
CCM2-216ENST00000488727 VEGFAP15692 232 aaPredicted RBP23.41■■□□□ 1.34
CCM2-216ENST00000488727 SPTY2D1Q68D10 685 aaPredicted RBP23.41■■□□□ 1.34
CCM2-216ENST00000488727 ZNF784Q8NCA9 323 aaPredicted RBP23.41■■□□□ 1.34
CCM2-216ENST00000488727 TAF1DQ9H5J8 278 aaPredicted RBP23.41■■□□□ 1.34
CCM2-216ENST00000488727 EPHX2P34913 555 aa23.4■■□□□ 1.34
CCM2-216ENST00000488727 MECOMQ03112 1051 aa23.4■■□□□ 1.34
CCM2-216ENST00000488727 DIXDC1Q155Q3 683 aa23.4■■□□□ 1.34
CCM2-216ENST00000488727 TRPM4Q8TD43 1214 aa23.4■■□□□ 1.34
CCM2-216ENST00000488727 MYOZ2Q9NPC6 264 aa23.4■■□□□ 1.34
CCM2-216ENST00000488727 HDAC9Q9UKV0 1011 aa23.4■■□□□ 1.34
CCM2-216ENST00000488727 PCDHAC2Q9Y5I4 1007 aa23.4■■□□□ 1.34
CCM2-216ENST00000488727 MYH7P12883 1935 aa23.4■■□□□ 1.34
CCM2-216ENST00000488727 IDH1O75874 414 aaKnown RBP23.39■■□□□ 1.34
CCM2-216ENST00000488727 TTF1Q15361 905 aaPredicted RBP23.39■■□□□ 1.34
CCM2-216ENST00000488727 TBC1D10BQ4KMP7 808 aaPredicted RBP23.39■■□□□ 1.34
CCM2-216ENST00000488727 NSUN4Q96CB9 384 aaKnown RBP23.39■■□□□ 1.34
CCM2-216ENST00000488727 ADARB2Q9NS39 739 aaKnown RBP23.39■■□□□ 1.34
CCM2-216ENST00000488727 RAI14Q9P0K7 980 aa23.39■■□□□ 1.34
CCM2-216ENST00000488727 MAST3O60307 1309 aa23.39■■□□□ 1.34
CCM2-216ENST00000488727 RBM26Q5T8P6 1007 aaKnown RBP23.39■■□□□ 1.33
CCM2-216ENST00000488727 DZIP1Q86YF9 867 aaKnown RBP23.39■■□□□ 1.33
CCM2-216ENST00000488727 CRKP46108 304 aa23.38■■□□□ 1.33
CCM2-216ENST00000488727 MMP14P50281 582 aa23.38■■□□□ 1.33
CCM2-216ENST00000488727 HIRAP54198 1017 aaPredicted RBP23.38■■□□□ 1.33
CCM2-216ENST00000488727 SERPINA10Q9UK55 444 aa23.38■■□□□ 1.33
CCM2-216ENST00000488727 HDLBPQ00341 1268 aaKnown RBP23.37■■□□□ 1.33
CCM2-216ENST00000488727 KIF4BQ2VIQ3 1234 aa23.37■■□□□ 1.33
CCM2-216ENST00000488727 CFAP100Q494V2 611 aa23.37■■□□□ 1.33
CCM2-216ENST00000488727 C22orf23Q9BZE7 217 aa23.37■■□□□ 1.33
CCM2-216ENST00000488727 ECM29Q5VYK3 1845 aa23.37■■□□□ 1.33
CCM2-216ENST00000488727 TEKT1Q969V4 418 aa23.36■■□□□ 1.33
CCM2-216ENST00000488727 ZBED3Q96IU2 234 aaPredicted RBP23.36■■□□□ 1.33
CCM2-216ENST00000488727 AK9Q5TCS8 1911 aa23.36■■□□□ 1.33
CCM2-216ENST00000488727 HHIPL2Q6UWX4 724 aa23.36■■□□□ 1.33
CCM2-216ENST00000488727 MRIQ9BWK5 157 aa23.36■■□□□ 1.33
CCM2-216ENST00000488727 WNT10BO00744 389 aa23.35■■□□□ 1.33
CCM2-216ENST00000488727 POTEIP0CG38 1075 aa23.35■■□□□ 1.33
CCM2-216ENST00000488727 POTEJP0CG39 1038 aa23.35■■□□□ 1.33
CCM2-216ENST00000488727 GSPT1P15170 499 aaKnown RBP23.35■■□□□ 1.33
CCM2-216ENST00000488727 RBM5P52756 815 aaKnown RBP eCLIP23.35■■□□□ 1.33
CCM2-216ENST00000488727 MAP3K12Q12852 859 aa23.35■■□□□ 1.33
CCM2-216ENST00000488727 NBPF9Q3BBW0 867 aa23.35■■□□□ 1.33
CCM2-216ENST00000488727 TTC22Q5TAA0 569 aa23.35■■□□□ 1.33
CCM2-216ENST00000488727 USP50Q70EL3 339 aaPredicted RBP23.35■■□□□ 1.33
CCM2-216ENST00000488727 KBTBD3Q8NAB2 608 aa23.35■■□□□ 1.33
CCM2-216ENST00000488727 MTMR14Q8NCE2 650 aa23.35■■□□□ 1.33
CCM2-216ENST00000488727 PRMT6Q96LA8 375 aaPredicted RBP23.35■■□□□ 1.33
CCM2-216ENST00000488727 DAGLAQ9Y4D2 1042 aa23.35■■□□□ 1.33
CCM2-216ENST00000488727 SPDYE2BA6NHP3 402 aa23.34■■□□□ 1.33
CCM2-216ENST00000488727 KIF3CO14782 793 aa23.34■■□□□ 1.33
CCM2-216ENST00000488727 CHGBP05060 677 aa23.34■■□□□ 1.33
CCM2-216ENST00000488727 SPDYE6P0CI01 402 aa23.34■■□□□ 1.33
CCM2-216ENST00000488727 MFAP1P55081 439 aaKnown RBP23.34■■□□□ 1.33
CCM2-216ENST00000488727 DLGAP5Q15398 846 aa23.34■■□□□ 1.33
CCM2-216ENST00000488727 ADGRA1Q86SQ6 560 aa23.34■■□□□ 1.33
CCM2-216ENST00000488727 MAGEB6Q8N7X4 407 aa23.34■■□□□ 1.33
CCM2-216ENST00000488727 GAKO14976 1311 aa23.34■■□□□ 1.33
CCM2-216ENST00000488727 ASTN2O75129 1339 aaPredicted RBP23.34■■□□□ 1.33
CCM2-216ENST00000488727 EAPPQ56P03 285 aaPredicted RBP23.33■■□□□ 1.33
CCM2-216ENST00000488727 NAA16Q6N069 864 aaPredicted RBP23.33■■□□□ 1.33
CCM2-216ENST00000488727 ZDHHC15Q96MV8 337 aa23.33■■□□□ 1.33
CCM2-216ENST00000488727 MROH7-TTC4A0A0A0MT08 1334 aa23.33■■□□□ 1.33
CCM2-216ENST00000488727 IGSF3O75054 1194 aa23.33■■□□□ 1.32
CCM2-216ENST00000488727 PDE6AP16499 860 aa23.33■■□□□ 1.32
CCM2-216ENST00000488727 SLFNL1Q499Z3 407 aa23.33■■□□□ 1.32
CCM2-216ENST00000488727 SLC9C2Q5TAH2 1124 aa23.33■■□□□ 1.32
CCM2-216ENST00000488727 APOBEC3HQ6NTF7 200 aaKnown RBP23.33■■□□□ 1.32
CCM2-216ENST00000488727 PNMA8AQ86V59 439 aaPredicted RBP23.33■■□□□ 1.32
CCM2-216ENST00000488727 FAM163AQ96GL9 167 aaPredicted RBP23.33■■□□□ 1.32
CCM2-216ENST00000488727 EVI5LQ96CN4 794 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms