RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 SPINK5Q9NQ38 1064 aaPredicted RBP24.04■■□□□ 1.44
GGPS1-206ENST00000488594 HDLBPQ00341 1268 aaKnown RBP24.03■■□□□ 1.44
GGPS1-206ENST00000488594 ARHGEF6Q15052 776 aa24.03■■□□□ 1.44
GGPS1-206ENST00000488594 TBC1D22AQ8WUA7 517 aa24.03■■□□□ 1.44
GGPS1-206ENST00000488594 SUCLG2Q96I99 432 aa24.03■■□□□ 1.44
GGPS1-206ENST00000488594 RIPOR2Q9Y4F9 1068 aa24.03■■□□□ 1.44
GGPS1-206ENST00000488594 POTEFA5A3E0 1075 aa24.03■■□□□ 1.44
GGPS1-206ENST00000488594 TCP10L2B9ZVM9 353 aa24.03■■□□□ 1.44
GGPS1-206ENST00000488594 ANP32CO43423 234 aa24.03■■□□□ 1.44
GGPS1-206ENST00000488594 GTF2A2P52657 109 aa24.03■■□□□ 1.44
GGPS1-206ENST00000488594 MAP3K9P80192 1104 aa24.03■■□□□ 1.44
GGPS1-206ENST00000488594 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.03■■□□□ 1.44
GGPS1-206ENST00000488594 PUS3Q9BZE2 481 aaKnown RBP24.03■■□□□ 1.44
GGPS1-206ENST00000488594 CSADQ9Y600 493 aa24.03■■□□□ 1.44
GGPS1-206ENST00000488594 UTYO14607 1347 aa24.02■■□□□ 1.44
GGPS1-206ENST00000488594 VGLL4Q14135 290 aa24.02■■□□□ 1.44
GGPS1-206ENST00000488594 CAVIN4Q5BKX8 364 aa24.02■■□□□ 1.44
GGPS1-206ENST00000488594 FBXO33Q7Z6M2 555 aa24.02■■□□□ 1.44
GGPS1-206ENST00000488594 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.02■■□□□ 1.44
GGPS1-206ENST00000488594 KAZALD1Q96I82 304 aa24.02■■□□□ 1.44
GGPS1-206ENST00000488594 TMEM39BQ9GZU3 492 aa24.02■■□□□ 1.44
GGPS1-206ENST00000488594 ZFYVE28Q9HCC9 887 aa24.01■■□□□ 1.43
GGPS1-206ENST00000488594 NBPF7P0C2Y1 421 aaPredicted RBP24■■□□□ 1.43
GGPS1-206ENST00000488594 RABL6Q3YEC7 729 aaPredicted RBP24■■□□□ 1.43
GGPS1-206ENST00000488594 CDAN1Q8IWY9 1227 aa24■■□□□ 1.43
GGPS1-206ENST00000488594 BRI3BPQ8WY22 251 aa24■■□□□ 1.43
GGPS1-206ENST00000488594 HTTP42858 3142 aa23.99■■□□□ 1.43
GGPS1-206ENST00000488594 CCL15-CCL14A0A0B4J2E2 113 aa23.99■■□□□ 1.43
GGPS1-206ENST00000488594 FRAT2O75474 233 aaPredicted RBP23.99■■□□□ 1.43
GGPS1-206ENST00000488594 WDHD1O75717 1129 aaPredicted RBP23.99■■□□□ 1.43
GGPS1-206ENST00000488594 TAF1CQ15572 869 aaPredicted RBP23.99■■□□□ 1.43
GGPS1-206ENST00000488594 CCL15Q16663 113 aa23.99■■□□□ 1.43
GGPS1-206ENST00000488594 TEKT1Q969V4 418 aa23.99■■□□□ 1.43
GGPS1-206ENST00000488594 ARAP2Q8WZ64 1704 aa23.99■■□□□ 1.43
GGPS1-206ENST00000488594 OTOFQ9HC10 1997 aa23.98■■□□□ 1.43
GGPS1-206ENST00000488594 METTL24Q5JXM2 366 aa23.98■■□□□ 1.43
GGPS1-206ENST00000488594 CNKSR2Q8WXI2 1034 aa23.98■■□□□ 1.43
GGPS1-206ENST00000488594 HOOK2Q96ED9 719 aa23.98■■□□□ 1.43
GGPS1-206ENST00000488594 OTUD5Q96G74 571 aa23.98■■□□□ 1.43
GGPS1-206ENST00000488594 MRIQ9BWK5 157 aa23.98■■□□□ 1.43
GGPS1-206ENST00000488594 BICC1Q9H694 974 aaKnown RBP23.98■■□□□ 1.43
GGPS1-206ENST00000488594 TMOD2Q9NZR1 351 aa23.98■■□□□ 1.43
GGPS1-206ENST00000488594 CHAF1AQ13111 956 aaPredicted RBP23.97■■□□□ 1.43
GGPS1-206ENST00000488594 ZDHHC15Q96MV8 337 aa23.97■■□□□ 1.43
GGPS1-206ENST00000488594 SUGT1Q9Y2Z0 365 aa23.97■■□□□ 1.43
GGPS1-206ENST00000488594 SPDYE5A6NIY4 337 aa23.96■■□□□ 1.43
GGPS1-206ENST00000488594 PDE8BO95263 885 aa23.96■■□□□ 1.43
GGPS1-206ENST00000488594 GRIK5Q16478 980 aa23.96■■□□□ 1.43
GGPS1-206ENST00000488594 FKBP1CQ5VVH2 108 aa23.96■■□□□ 1.43
GGPS1-206ENST00000488594 NBPF11Q86T75 865 aa23.96■■□□□ 1.43
GGPS1-206ENST00000488594 FAM83AQ86UY5 434 aa23.96■■□□□ 1.43
GGPS1-206ENST00000488594 TMEM106CQ9BVX2 250 aa23.96■■□□□ 1.43
GGPS1-206ENST00000488594 ZCCHC17Q9NP64 241 aaKnown RBP23.96■■□□□ 1.43
GGPS1-206ENST00000488594 IQSEC3Q9UPP2 1182 aaPredicted RBP23.96■■□□□ 1.43
GGPS1-206ENST00000488594 MAST3O60307 1309 aa23.96■■□□□ 1.43
GGPS1-206ENST00000488594 RBBP6Q7Z6E9 1792 aaKnown RBP23.95■■□□□ 1.42
GGPS1-206ENST00000488594 LRRC24Q50LG9 513 aa23.95■■□□□ 1.42
GGPS1-206ENST00000488594 VGLL2Q8N8G2 317 aa23.95■■□□□ 1.42
GGPS1-206ENST00000488594 ZNF333Q96JL9 665 aa23.95■■□□□ 1.42
GGPS1-206ENST00000488594 KIF16BQ96L93 1317 aa23.95■■□□□ 1.42
GGPS1-206ENST00000488594 CETPP11597 493 aa23.94■■□□□ 1.42
GGPS1-206ENST00000488594 CAP1Q01518 475 aa23.94■■□□□ 1.42
GGPS1-206ENST00000488594 ERO1BQ86YB8 467 aa23.94■■□□□ 1.42
GGPS1-206ENST00000488594 FAM43AQ8N2R8 423 aa23.94■■□□□ 1.42
GGPS1-206ENST00000488594 EN2P19622 333 aaPredicted RBP23.93■■□□□ 1.42
GGPS1-206ENST00000488594 SLC9C1Q4G0N8 1177 aa23.93■■□□□ 1.42
GGPS1-206ENST00000488594 ANKRD44Q8N8A2 993 aa23.93■■□□□ 1.42
GGPS1-206ENST00000488594 WRNIP1Q96S55 665 aa23.93■■□□□ 1.42
GGPS1-206ENST00000488594 CACNB3P54284 484 aa23.92■■□□□ 1.42
GGPS1-206ENST00000488594 SNAPC2Q13487 334 aa23.92■■□□□ 1.42
GGPS1-206ENST00000488594 SNCAIPQ9Y6H5 919 aa23.92■■□□□ 1.42
GGPS1-206ENST00000488594 PTPRCP08575 1304 aa23.92■■□□□ 1.42
GGPS1-206ENST00000488594 TLR2O60603 784 aa23.91■■□□□ 1.42
GGPS1-206ENST00000488594 IFIT1P09914 478 aaKnown RBP23.91■■□□□ 1.42
GGPS1-206ENST00000488594 BCAMP50895 628 aa23.91■■□□□ 1.42
GGPS1-206ENST00000488594 PUM3Q15397 648 aaKnown RBP23.91■■□□□ 1.42
GGPS1-206ENST00000488594 HABP4Q5JVS0 413 aaKnown RBP23.91■■□□□ 1.42
GGPS1-206ENST00000488594 DCAF15Q66K64 600 aa23.91■■□□□ 1.42
GGPS1-206ENST00000488594 APOBEC3HQ6NTF7 200 aaKnown RBP23.91■■□□□ 1.42
GGPS1-206ENST00000488594 PTCH2Q9Y6C5 1203 aa23.91■■□□□ 1.42
GGPS1-206ENST00000488594 RPAP1Q9BWH6 1393 aaPredicted RBP23.91■■□□□ 1.42
GGPS1-206ENST00000488594 KIAA0100Q14667 2235 aaKnown RBP23.91■■□□□ 1.42
GGPS1-206ENST00000488594 KIF22Q14807 665 aa23.91■■□□□ 1.42
GGPS1-206ENST00000488594 HHIPL2Q6UWX4 724 aa23.91■■□□□ 1.42
GGPS1-206ENST00000488594 GNRH1P01148 92 aa23.9■■□□□ 1.42
GGPS1-206ENST00000488594 PPIL2Q13356 520 aa23.9■■□□□ 1.42
GGPS1-206ENST00000488594 FAM9BQ8IZU0 186 aa23.9■■□□□ 1.42
GGPS1-206ENST00000488594 MRPL50Q8N5N7 158 aaKnown RBP23.9■■□□□ 1.42
GGPS1-206ENST00000488594 IRF6O14896 467 aa23.89■■□□□ 1.41
GGPS1-206ENST00000488594 ZKSCAN4Q969J2 545 aaPredicted RBP23.89■■□□□ 1.41
GGPS1-206ENST00000488594 MKI67P46013 3256 aaKnown RBP23.88■■□□□ 1.41
GGPS1-206ENST00000488594 ZNF521Q96K83 1311 aa23.88■■□□□ 1.41
GGPS1-206ENST00000488594 BTBD19C9JJ37 291 aa23.88■■□□□ 1.41
GGPS1-206ENST00000488594 FGFR2P21802 821 aa23.88■■□□□ 1.41
GGPS1-206ENST00000488594 LACTBP83111 547 aaPredicted RBP23.88■■□□□ 1.41
GGPS1-206ENST00000488594 PPATQ06203 517 aa23.88■■□□□ 1.41
GGPS1-206ENST00000488594 SLC4A8Q2Y0W8 1093 aa23.88■■□□□ 1.41
GGPS1-206ENST00000488594 WDR66Q8TBY9 1149 aa23.88■■□□□ 1.41
GGPS1-206ENST00000488594 ZNF341Q9BYN7 854 aa23.88■■□□□ 1.41
GGPS1-206ENST00000488594 CENPFP49454 3210 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms