RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 SPDYE6P0CI01 402 aa11.48□□□□□ -0.57
LCN2-205ENST00000487719 CRKP46108 304 aa11.48□□□□□ -0.57
LCN2-205ENST00000487719 TNNI2P48788 182 aa11.48□□□□□ -0.57
LCN2-205ENST00000487719 TTLL12Q14166 644 aaPredicted RBP11.48□□□□□ -0.57
LCN2-205ENST00000487719 DEFB115Q30KQ5 88 aa11.48□□□□□ -0.57
LCN2-205ENST00000487719 CLASRPQ8N2M8 674 aaKnown RBP11.48□□□□□ -0.57
LCN2-205ENST00000487719 KIF1BPQ96EK5 621 aa11.48□□□□□ -0.57
LCN2-205ENST00000487719 VEZTQ9HBM0 779 aa11.48□□□□□ -0.57
LCN2-205ENST00000487719 ZBTB47Q9UFB7 747 aaPredicted RBP11.48□□□□□ -0.57
LCN2-205ENST00000487719 ABCF2Q9UG63 623 aa11.48□□□□□ -0.57
LCN2-205ENST00000487719 EXOC6BQ9Y2D4 811 aa11.48□□□□□ -0.57
LCN2-205ENST00000487719 PPP2R3BQ9Y5P8 575 aa11.48□□□□□ -0.57
LCN2-205ENST00000487719 SALL1Q9NSC2 1324 aa11.48□□□□□ -0.57
LCN2-205ENST00000487719 CNTNAP1P78357 1384 aa11.47□□□□□ -0.57
LCN2-205ENST00000487719 ZBTB22O15209 634 aa11.47□□□□□ -0.57
LCN2-205ENST00000487719 ADORA1P30542 326 aa11.47□□□□□ -0.57
LCN2-205ENST00000487719 FKBP1BP68106 108 aa11.47□□□□□ -0.57
LCN2-205ENST00000487719 HTRA3P83110 453 aa11.47□□□□□ -0.57
LCN2-205ENST00000487719 AAMPQ13685 434 aa11.47□□□□□ -0.57
LCN2-205ENST00000487719 C20orf194Q5TEA3 1177 aa11.47□□□□□ -0.57
LCN2-205ENST00000487719 CDCA5Q96FF9 252 aa11.47□□□□□ -0.57
LCN2-205ENST00000487719 MRIQ9BWK5 157 aa11.47□□□□□ -0.57
LCN2-205ENST00000487719 GBA2Q9HCG7 927 aaPredicted RBP11.47□□□□□ -0.57
LCN2-205ENST00000487719 MKRN1Q9UHC7 482 aaKnown RBP11.47□□□□□ -0.57
LCN2-205ENST00000487719 APBB1O00213 710 aa11.46□□□□□ -0.57
LCN2-205ENST00000487719 IFIT2P09913 472 aaKnown RBP11.46□□□□□ -0.57
LCN2-205ENST00000487719 GSTO1P78417 241 aa11.46□□□□□ -0.57
LCN2-205ENST00000487719 RASGRF1Q13972 1273 aa11.46□□□□□ -0.57
LCN2-205ENST00000487719 HHIPL2Q6UWX4 724 aa11.46□□□□□ -0.57
LCN2-205ENST00000487719 ERICH6Q7L0X2 663 aa11.46□□□□□ -0.57
LCN2-205ENST00000487719 AACSQ86V21 672 aa11.46□□□□□ -0.57
LCN2-205ENST00000487719 SPATA5Q8NB90 893 aa11.46□□□□□ -0.57
LCN2-205ENST00000487719 NOL10Q9BSC4 688 aaKnown RBP11.46□□□□□ -0.57
LCN2-205ENST00000487719 TLL2Q9Y6L7 1015 aa11.46□□□□□ -0.57
LCN2-205ENST00000487719 DOCK2Q92608 1830 aa11.46□□□□□ -0.58
LCN2-205ENST00000487719 ASTN2O75129 1339 aaPredicted RBP11.45□□□□□ -0.58
LCN2-205ENST00000487719 CLRN2A0PK11 232 aa11.45□□□□□ -0.58
LCN2-205ENST00000487719 RASSF10A6NK89 507 aa11.45□□□□□ -0.58
LCN2-205ENST00000487719 PPP1R12BO60237 982 aaPredicted RBP11.45□□□□□ -0.58
LCN2-205ENST00000487719 ARID4AP29374 1257 aaPredicted RBP11.45□□□□□ -0.58
LCN2-205ENST00000487719 HUNKP57058 714 aa11.45□□□□□ -0.58
LCN2-205ENST00000487719 GRM1Q13255 1194 aa11.45□□□□□ -0.58
LCN2-205ENST00000487719 SUPT20HL1Q3ZLR7 823 aa11.45□□□□□ -0.58
LCN2-205ENST00000487719 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
LCN2-205ENST00000487719 ARMC9Q7Z3E5 817 aa11.45□□□□□ -0.58
LCN2-205ENST00000487719 RHPN1Q8TCX5 695 aa11.45□□□□□ -0.58
LCN2-205ENST00000487719 HOOK2Q96ED9 719 aa11.45□□□□□ -0.58
LCN2-205ENST00000487719 ZBED3Q96IU2 234 aaPredicted RBP11.45□□□□□ -0.58
LCN2-205ENST00000487719 HHIPL1Q96JK4 782 aa11.45□□□□□ -0.58
LCN2-205ENST00000487719 ZDHHC15Q96MV8 337 aa11.45□□□□□ -0.58
LCN2-205ENST00000487719 BCL11AQ9H165 835 aa11.45□□□□□ -0.58
LCN2-205ENST00000487719 LRP2BPQ9P2M1 347 aa11.45□□□□□ -0.58
LCN2-205ENST00000487719 IGSF3O75054 1194 aa11.44□□□□□ -0.58
LCN2-205ENST00000487719 LDHCP07864 332 aa11.44□□□□□ -0.58
LCN2-205ENST00000487719 CST9Q5W186 159 aa11.44□□□□□ -0.58
LCN2-205ENST00000487719 DNAJC5GQ8N7S2 189 aa11.44□□□□□ -0.58
LCN2-205ENST00000487719 AIDAQ96BJ3 306 aa11.44□□□□□ -0.58
LCN2-205ENST00000487719 PRMT6Q96LA8 375 aaPredicted RBP11.44□□□□□ -0.58
LCN2-205ENST00000487719 DBNDD2Q9BQY9 259 aa11.44□□□□□ -0.58
LCN2-205ENST00000487719 BEGAINQ9BUH8 593 aa11.44□□□□□ -0.58
LCN2-205ENST00000487719 LRRCC1Q9C099 1032 aa11.44□□□□□ -0.58
LCN2-205ENST00000487719 DEFB129Q9H1M3 183 aa11.44□□□□□ -0.58
LCN2-205ENST00000487719 TDRD3Q9H7E2 651 aaKnown RBP11.44□□□□□ -0.58
LCN2-205ENST00000487719 RAI14Q9P0K7 980 aa11.44□□□□□ -0.58
LCN2-205ENST00000487719 ZNF70Q9UC06 446 aaPredicted RBP11.44□□□□□ -0.58
LCN2-205ENST00000487719 CDK5RAP2Q96SN8 1893 aa11.44□□□□□ -0.58
LCN2-205ENST00000487719 PRDX5P30044 214 aa11.43□□□□□ -0.58
LCN2-205ENST00000487719 FMR1Q06787 632 aaKnown RBP eCLIP11.43□□□□□ -0.58
LCN2-205ENST00000487719 SAPCD2Q86UD0 394 aa11.43□□□□□ -0.58
LCN2-205ENST00000487719 CCDC102AQ96A19 550 aa11.43□□□□□ -0.58
LCN2-205ENST00000487719 GPATCH3Q96I76 525 aa11.43□□□□□ -0.58
LCN2-205ENST00000487719 ZNF512BQ96KM6 892 aaPredicted RBP11.43□□□□□ -0.58
LCN2-205ENST00000487719 CAPNS2Q96L46 248 aa11.43□□□□□ -0.58
LCN2-205ENST00000487719 CCDC8Q9H0W5 538 aaPredicted RBP11.43□□□□□ -0.58
LCN2-205ENST00000487719 IL1RAPL2Q9NP60 686 aa11.43□□□□□ -0.58
LCN2-205ENST00000487719 HMG20BQ9P0W2 317 aa11.43□□□□□ -0.58
LCN2-205ENST00000487719 FOCADQ5VW36 1801 aa11.43□□□□□ -0.58
LCN2-205ENST00000487719 MYH1P12882 1939 aa11.43□□□□□ -0.58
LCN2-205ENST00000487719 PCNTO95613 3336 aa11.42□□□□□ -0.58
LCN2-205ENST00000487719 WDR33Q9C0J8 1336 aaKnown RBP11.42□□□□□ -0.58
LCN2-205ENST00000487719 OTOFQ9HC10 1997 aa11.42□□□□□ -0.58
LCN2-205ENST00000487719 TCP10L2B9ZVM9 353 aa11.42□□□□□ -0.58
LCN2-205ENST00000487719 MCAMP43121 646 aa11.42□□□□□ -0.58
LCN2-205ENST00000487719 IREB2P48200 963 aaKnown RBP11.42□□□□□ -0.58
LCN2-205ENST00000487719 ZNF157P51786 506 aaPredicted RBP11.42□□□□□ -0.58
LCN2-205ENST00000487719 TTF1Q15361 905 aaPredicted RBP11.42□□□□□ -0.58
LCN2-205ENST00000487719 FKBP1CQ5VVH2 108 aa11.42□□□□□ -0.58
LCN2-205ENST00000487719 EAF2Q96CJ1 260 aaPredicted RBP11.42□□□□□ -0.58
LCN2-205ENST00000487719 DBNLQ9UJU6 430 aaKnown RBP11.42□□□□□ -0.58
LCN2-205ENST00000487719 MYH8P13535 1937 aa11.42□□□□□ -0.58
LCN2-205ENST00000487719 THSD7BQ9C0I4 1608 aa11.42□□□□□ -0.58
LCN2-205ENST00000487719 BAG3O95817 575 aa11.41□□□□□ -0.58
LCN2-205ENST00000487719 PLCG2P16885 1265 aa11.41□□□□□ -0.58
LCN2-205ENST00000487719 VEGFBP49765 207 aa11.41□□□□□ -0.58
LCN2-205ENST00000487719 MAP2K1Q02750 393 aaPredicted RBP11.41□□□□□ -0.58
LCN2-205ENST00000487719 NOGQ13253 232 aa11.41□□□□□ -0.58
LCN2-205ENST00000487719 RASA3Q14644 834 aa11.41□□□□□ -0.58
LCN2-205ENST00000487719 DIXDC1Q155Q3 683 aa11.41□□□□□ -0.58
LCN2-205ENST00000487719 RGMBQ6NW40 437 aa11.41□□□□□ -0.58
LCN2-205ENST00000487719 TMED8Q6PL24 325 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms