RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 CC2D1BQ5T0F9 858 aaKnown RBP12.5□□□□□ -0.41
CDK11A-217ENST00000487462 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
CDK11A-217ENST00000487462 RPTORQ8N122 1335 aa12.5□□□□□ -0.41
CDK11A-217ENST00000487462 CTGFP29279 349 aa12.49□□□□□ -0.41
CDK11A-217ENST00000487462 FAM43AQ8N2R8 423 aa12.49□□□□□ -0.41
CDK11A-217ENST00000487462 PNISRQ8TF01 805 aaKnown RBP12.49□□□□□ -0.41
CDK11A-217ENST00000487462 OPTNQ96CV9 577 aa12.49□□□□□ -0.41
CDK11A-217ENST00000487462 GUCD1Q96NT3 240 aa12.49□□□□□ -0.41
CDK11A-217ENST00000487462 SEC31BQ9NQW1 1179 aa12.49□□□□□ -0.41
CDK11A-217ENST00000487462 MYO3BQ8WXR4 1341 aa12.48□□□□□ -0.41
CDK11A-217ENST00000487462 PER1O15534 1290 aaPredicted RBP12.48□□□□□ -0.41
CDK11A-217ENST00000487462 USP2O75604 605 aaPredicted RBP12.48□□□□□ -0.41
CDK11A-217ENST00000487462 GNRH1P01148 92 aa12.48□□□□□ -0.41
CDK11A-217ENST00000487462 HSPA5P11021 654 aaKnown RBP12.48□□□□□ -0.41
CDK11A-217ENST00000487462 PRMT2P55345 433 aa12.48□□□□□ -0.41
CDK11A-217ENST00000487462 COPS6Q7L5N1 327 aa12.48□□□□□ -0.41
CDK11A-217ENST00000487462 XAGE3Q8WTP9 111 aa12.48□□□□□ -0.41
CDK11A-217ENST00000487462 U2AF1L4Q8WU68 220 aaKnown RBP12.48□□□□□ -0.41
CDK11A-217ENST00000487462 RNF208Q9H0X6 261 aa12.48□□□□□ -0.41
CDK11A-217ENST00000487462 SPEF2Q9C093 1822 aa12.48□□□□□ -0.41
CDK11A-217ENST00000487462 DNAH12Q6ZR08 3092 aa12.48□□□□□ -0.41
CDK11A-217ENST00000487462 XDHP47989 1333 aa12.47□□□□□ -0.41
CDK11A-217ENST00000487462 ZNF316A6NFI3 1004 aaPredicted RBP12.47□□□□□ -0.41
CDK11A-217ENST00000487462 TLR2O60603 784 aa12.47□□□□□ -0.41
CDK11A-217ENST00000487462 GRK4P32298 578 aa12.47□□□□□ -0.41
CDK11A-217ENST00000487462 PLA2G5P39877 138 aa12.47□□□□□ -0.41
CDK11A-217ENST00000487462 IREB2P48200 963 aaKnown RBP12.47□□□□□ -0.41
CDK11A-217ENST00000487462 AIMP1Q12904 312 aaKnown RBP12.47□□□□□ -0.41
CDK11A-217ENST00000487462 ANKRD13AQ8IZ07 590 aa12.47□□□□□ -0.41
CDK11A-217ENST00000487462 ELP3Q9H9T3 547 aa12.47□□□□□ -0.41
CDK11A-217ENST00000487462 RIPOR2Q9Y4F9 1068 aa12.47□□□□□ -0.41
CDK11A-217ENST00000487462 MED23Q9ULK4 1368 aa12.46□□□□□ -0.41
CDK11A-217ENST00000487462 CCL15-CCL14A0A0B4J2E2 113 aa12.46□□□□□ -0.41
CDK11A-217ENST00000487462 HOXB3P14651 431 aaPredicted RBP12.46□□□□□ -0.41
CDK11A-217ENST00000487462 MMP14P50281 582 aa12.46□□□□□ -0.41
CDK11A-217ENST00000487462 KIF22Q14807 665 aa12.46□□□□□ -0.41
CDK11A-217ENST00000487462 CCL15Q16663 113 aa12.46□□□□□ -0.41
CDK11A-217ENST00000487462 NBPF12Q5TAG4 269 aaPredicted RBP12.46□□□□□ -0.41
CDK11A-217ENST00000487462 STRIP1Q5VSL9 837 aa12.46□□□□□ -0.41
CDK11A-217ENST00000487462 TDHQ8IZJ6 230 aa12.46□□□□□ -0.41
CDK11A-217ENST00000487462 TRIM47Q96LD4 638 aa12.46□□□□□ -0.41
CDK11A-217ENST00000487462 SRRDQ9UH36 339 aa12.46□□□□□ -0.41
CDK11A-217ENST00000487462 PPP2R3BQ9Y5P8 575 aa12.46□□□□□ -0.41
CDK11A-217ENST00000487462 MGAMO43451 1857 aa12.46□□□□□ -0.42
CDK11A-217ENST00000487462 ZNF804BA4D1E1 1349 aa12.45□□□□□ -0.42
CDK11A-217ENST00000487462 EIF2S2P20042 333 aaKnown RBP12.45□□□□□ -0.42
CDK11A-217ENST00000487462 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
CDK11A-217ENST00000487462 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
CDK11A-217ENST00000487462 KIAA0825Q8IV33 1275 aa12.45□□□□□ -0.42
CDK11A-217ENST00000487462 FBXW7Q969H0 707 aa12.45□□□□□ -0.42
CDK11A-217ENST00000487462 ISCA1Q9BUE6 129 aa12.45□□□□□ -0.42
CDK11A-217ENST00000487462 UNC93B1Q9H1C4 597 aa12.45□□□□□ -0.42
CDK11A-217ENST00000487462 AOX1Q06278 1338 aa12.44□□□□□ -0.42
CDK11A-217ENST00000487462 IRS4O14654 1257 aaPredicted RBP12.44□□□□□ -0.42
CDK11A-217ENST00000487462 SGPL1O95470 568 aa12.44□□□□□ -0.42
CDK11A-217ENST00000487462 MAGEA10P43363 369 aaPredicted RBP12.44□□□□□ -0.42
CDK11A-217ENST00000487462 GTF2A2P52657 109 aa12.44□□□□□ -0.42
CDK11A-217ENST00000487462 EIF4G2P78344 907 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDK11A-217ENST00000487462 SUPT20HL1Q3ZLR7 823 aa12.44□□□□□ -0.42
CDK11A-217ENST00000487462 PTCD2Q8WV60 388 aaKnown RBP12.44□□□□□ -0.42
CDK11A-217ENST00000487462 ZMYND8Q9ULU4 1186 aaPredicted RBP12.44□□□□□ -0.42
CDK11A-217ENST00000487462 PCDHAC2Q9Y5I4 1007 aa12.44□□□□□ -0.42
CDK11A-217ENST00000487462 COL2A1P02458 1487 aaPredicted RBP12.44□□□□□ -0.42
CDK11A-217ENST00000487462 ATP5J2-PTCD1G3V325 749 aa12.43□□□□□ -0.42
CDK11A-217ENST00000487462 U2AF1L5P0DN76 240 aaPredicted RBP12.43□□□□□ -0.42
CDK11A-217ENST00000487462 OSBPP22059 807 aa12.43□□□□□ -0.42
CDK11A-217ENST00000487462 ATP2B4P23634 1241 aa12.43□□□□□ -0.42
CDK11A-217ENST00000487462 U2AF1Q01081 240 aaKnown RBP eCLIP12.43□□□□□ -0.42
CDK11A-217ENST00000487462 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.43□□□□□ -0.42
CDK11A-217ENST00000487462 C7orf61Q8IZ16 206 aa12.43□□□□□ -0.42
CDK11A-217ENST00000487462 RAET1EQ8TD07 263 aa12.43□□□□□ -0.42
CDK11A-217ENST00000487462 FAM163AQ96GL9 167 aaPredicted RBP12.43□□□□□ -0.42
CDK11A-217ENST00000487462 ARAP2Q8WZ64 1704 aa12.42□□□□□ -0.42
CDK11A-217ENST00000487462 IRS2Q9Y4H2 1338 aa12.42□□□□□ -0.42
CDK11A-217ENST00000487462 PSMC4P43686 418 aa12.42□□□□□ -0.42
CDK11A-217ENST00000487462 MAP3K9P80192 1104 aa12.42□□□□□ -0.42
CDK11A-217ENST00000487462 FAM109BQ6ICB4 259 aaPredicted RBP12.42□□□□□ -0.42
CDK11A-217ENST00000487462 C17orf99Q6UX52 265 aa12.42□□□□□ -0.42
CDK11A-217ENST00000487462 MTMR14Q8NCE2 650 aa12.42□□□□□ -0.42
CDK11A-217ENST00000487462 MYPNQ86TC9 1320 aa12.41□□□□□ -0.42
CDK11A-217ENST00000487462 CLRN2A0PK11 232 aa12.41□□□□□ -0.42
CDK11A-217ENST00000487462 BTBD19C9JJ37 291 aa12.41□□□□□ -0.42
CDK11A-217ENST00000487462 UBXN2AP68543 259 aa12.41□□□□□ -0.42
CDK11A-217ENST00000487462 VGLL4Q14135 290 aa12.41□□□□□ -0.42
CDK11A-217ENST00000487462 DLGAP5Q15398 846 aa12.41□□□□□ -0.42
CDK11A-217ENST00000487462 TTLL5Q6EMB2 1281 aa12.41□□□□□ -0.42
CDK11A-217ENST00000487462 TXNRD3Q86VQ6 643 aa12.41□□□□□ -0.42
CDK11A-217ENST00000487462 OXER1Q8TDS5 423 aa12.41□□□□□ -0.42
CDK11A-217ENST00000487462 DIS3LQ8TF46 1054 aaKnown RBP12.41□□□□□ -0.42
CDK11A-217ENST00000487462 PAWRQ96IZ0 340 aaKnown RBP12.41□□□□□ -0.42
CDK11A-217ENST00000487462 COA1Q9GZY4 146 aa12.41□□□□□ -0.42
CDK11A-217ENST00000487462 ZCCHC17Q9NP64 241 aaKnown RBP12.41□□□□□ -0.42
CDK11A-217ENST00000487462 BIN2Q9UBW5 565 aaPredicted RBP12.41□□□□□ -0.42
CDK11A-217ENST00000487462 PCDHGA4Q9Y5G9 962 aa12.41□□□□□ -0.42
CDK11A-217ENST00000487462 SYN1P17600 705 aa12.4□□□□□ -0.42
CDK11A-217ENST00000487462 PRKCZQ05513 592 aa12.4□□□□□ -0.42
CDK11A-217ENST00000487462 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
CDK11A-217ENST00000487462 FAM122AQ96E09 287 aa12.4□□□□□ -0.42
CDK11A-217ENST00000487462 FAM161BQ96MY7 647 aa12.4□□□□□ -0.42
CDK11A-217ENST00000487462 DDX60LQ5H9U9 1706 aaKnown RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms