RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 DENND2AQ9ULE3 1009 aa19.73■□□□□ 0.75
HDAC8-218ENST00000486704 DDX19BQ9UMR2 479 aa19.73■□□□□ 0.75
HDAC8-218ENST00000486704 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.73■□□□□ 0.75
HDAC8-218ENST00000486704 AOX1Q06278 1338 aa19.73■□□□□ 0.75
HDAC8-218ENST00000486704 SSC5DA1L4H1 1573 aa19.72■□□□□ 0.75
HDAC8-218ENST00000486704 NF2P35240 595 aa19.72■□□□□ 0.75
HDAC8-218ENST00000486704 TIMM10P62072 90 aa19.72■□□□□ 0.75
HDAC8-218ENST00000486704 MAP2K1Q02750 393 aaPredicted RBP19.72■□□□□ 0.75
HDAC8-218ENST00000486704 RGMBQ6NW40 437 aa19.72■□□□□ 0.75
HDAC8-218ENST00000486704 TEKT1Q969V4 418 aa19.72■□□□□ 0.75
HDAC8-218ENST00000486704 XAGE2Q96GT9 111 aa19.72■□□□□ 0.75
HDAC8-218ENST00000486704 DEFB129Q9H1M3 183 aa19.72■□□□□ 0.75
HDAC8-218ENST00000486704 GPR108Q9NPR9 543 aa19.72■□□□□ 0.75
HDAC8-218ENST00000486704 WBP1LQ9NX94 342 aa19.72■□□□□ 0.75
HDAC8-218ENST00000486704 NOP58Q9Y2X3 529 aaKnown RBP19.72■□□□□ 0.75
HDAC8-218ENST00000486704 AKAP11Q9UKA4 1901 aa19.72■□□□□ 0.75
HDAC8-218ENST00000486704 OTOFQ9HC10 1997 aa19.72■□□□□ 0.75
HDAC8-218ENST00000486704 MAST2Q6P0Q8 1798 aa19.71■□□□□ 0.75
HDAC8-218ENST00000486704 CLRN2A0PK11 232 aa19.71■□□□□ 0.75
HDAC8-218ENST00000486704 PDE3AQ14432 1141 aa19.71■□□□□ 0.75
HDAC8-218ENST00000486704 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.71■□□□□ 0.75
HDAC8-218ENST00000486704 ZDHHC15Q96MV8 337 aa19.71■□□□□ 0.75
HDAC8-218ENST00000486704 NOGQ13253 232 aa19.7■□□□□ 0.74
HDAC8-218ENST00000486704 TNFAIP1Q13829 316 aa19.7■□□□□ 0.74
HDAC8-218ENST00000486704 RASGRF1Q13972 1273 aa19.7■□□□□ 0.74
HDAC8-218ENST00000486704 PRAMEF18Q5VWM3 479 aa19.7■□□□□ 0.74
HDAC8-218ENST00000486704 HHIPL2Q6UWX4 724 aa19.7■□□□□ 0.74
HDAC8-218ENST00000486704 ZNF70Q9UC06 446 aaPredicted RBP19.7■□□□□ 0.74
HDAC8-218ENST00000486704 COG6Q9Y2V7 657 aa19.7■□□□□ 0.74
HDAC8-218ENST00000486704 FAM155AB1AL88 458 aaPredicted RBP19.69■□□□□ 0.74
HDAC8-218ENST00000486704 SURF6O75683 361 aaKnown RBP19.69■□□□□ 0.74
HDAC8-218ENST00000486704 GRM1Q13255 1194 aa19.69■□□□□ 0.74
HDAC8-218ENST00000486704 ZGPATQ8N5A5 531 aaKnown RBP19.69■□□□□ 0.74
HDAC8-218ENST00000486704 CCDC102AQ96A19 550 aa19.69■□□□□ 0.74
HDAC8-218ENST00000486704 CHMP4BQ9H444 224 aaKnown RBP19.69■□□□□ 0.74
HDAC8-218ENST00000486704 TDRD3Q9H7E2 651 aaKnown RBP19.69■□□□□ 0.74
HDAC8-218ENST00000486704 VEZTQ9HBM0 779 aa19.69■□□□□ 0.74
HDAC8-218ENST00000486704 ZBTB40Q9NUA8 1239 aa19.69■□□□□ 0.74
HDAC8-218ENST00000486704 AOC2O75106 756 aa19.68■□□□□ 0.74
HDAC8-218ENST00000486704 SLC10A3P09131 477 aa19.68■□□□□ 0.74
HDAC8-218ENST00000486704 PRDX5P30044 214 aa19.68■□□□□ 0.74
HDAC8-218ENST00000486704 AIDAQ96BJ3 306 aa19.68■□□□□ 0.74
HDAC8-218ENST00000486704 FOXN1O15353 648 aa19.67■□□□□ 0.74
HDAC8-218ENST00000486704 LDHBP07195 334 aaKnown RBP19.67■□□□□ 0.74
HDAC8-218ENST00000486704 ARID4AP29374 1257 aaPredicted RBP19.67■□□□□ 0.74
HDAC8-218ENST00000486704 ZNF157P51786 506 aaPredicted RBP19.67■□□□□ 0.74
HDAC8-218ENST00000486704 OS9Q13438 667 aaPredicted RBP19.67■□□□□ 0.74
HDAC8-218ENST00000486704 TNNI3KQ59H18 835 aa19.67■□□□□ 0.74
HDAC8-218ENST00000486704 NEUROD6Q96NK8 337 aa19.67■□□□□ 0.74
HDAC8-218ENST00000486704 FPGT-TNNI3KV9GXZ4 949 aa19.67■□□□□ 0.74
HDAC8-218ENST00000486704 RASA3Q14644 834 aa19.66■□□□□ 0.74
HDAC8-218ENST00000486704 APOBEC3HQ6NTF7 200 aaKnown RBP19.66■□□□□ 0.74
HDAC8-218ENST00000486704 ARMC9Q7Z3E5 817 aa19.66■□□□□ 0.74
HDAC8-218ENST00000486704 RASAL3Q86YV0 1011 aa19.66■□□□□ 0.74
HDAC8-218ENST00000486704 MYO5AQ9Y4I1 1855 aaKnown RBP19.65■□□□□ 0.74
HDAC8-218ENST00000486704 MAP3K11Q16584 847 aa19.65■□□□□ 0.74
HDAC8-218ENST00000486704 SUPT20HL1Q3ZLR7 823 aa19.65■□□□□ 0.74
HDAC8-218ENST00000486704 GORABQ5T7V8 394 aa19.65■□□□□ 0.74
HDAC8-218ENST00000486704 FKBP1CQ5VVH2 108 aa19.65■□□□□ 0.74
HDAC8-218ENST00000486704 MOB2Q70IA6 237 aa19.65■□□□□ 0.74
HDAC8-218ENST00000486704 RPAP2Q8IXW5 612 aaPredicted RBP19.65■□□□□ 0.74
HDAC8-218ENST00000486704 DAGLAQ9Y4D2 1042 aa19.65■□□□□ 0.74
HDAC8-218ENST00000486704 RPAP1Q9BWH6 1393 aaPredicted RBP19.65■□□□□ 0.74
HDAC8-218ENST00000486704 DOCK2Q92608 1830 aa19.65■□□□□ 0.74
HDAC8-218ENST00000486704 UBE2Q2LH0YL09 131 aa19.64■□□□□ 0.73
HDAC8-218ENST00000486704 TNNI2P48788 182 aa19.64■□□□□ 0.73
HDAC8-218ENST00000486704 CTCFP49711 727 aaPredicted RBP19.64■□□□□ 0.73
HDAC8-218ENST00000486704 TTLL12Q14166 644 aaPredicted RBP19.64■□□□□ 0.73
HDAC8-218ENST00000486704 ERC1Q8IUD2 1116 aa19.64■□□□□ 0.73
HDAC8-218ENST00000486704 TMOD2Q9NZR1 351 aa19.64■□□□□ 0.73
HDAC8-218ENST00000486704 GAKO14976 1311 aa19.63■□□□□ 0.73
HDAC8-218ENST00000486704 UNCXA6NJT0 531 aa19.63■□□□□ 0.73
HDAC8-218ENST00000486704 CA12O43570 354 aa19.63■□□□□ 0.73
HDAC8-218ENST00000486704 UQCRFS1P1P0C7P4 283 aa19.63■□□□□ 0.73
HDAC8-218ENST00000486704 DIXDC1Q155Q3 683 aa19.63■□□□□ 0.73
HDAC8-218ENST00000486704 HSP90AB4PQ58FF6 505 aa19.63■□□□□ 0.73
HDAC8-218ENST00000486704 LDLRAD1Q5T700 205 aa19.63■□□□□ 0.73
HDAC8-218ENST00000486704 C20orf194Q5TEA3 1177 aa19.63■□□□□ 0.73
HDAC8-218ENST00000486704 SPTY2D1Q68D10 685 aaPredicted RBP19.63■□□□□ 0.73
HDAC8-218ENST00000486704 FAM83AQ86UY5 434 aa19.63■□□□□ 0.73
HDAC8-218ENST00000486704 SPATA5Q8NB90 893 aa19.63■□□□□ 0.73
HDAC8-218ENST00000486704 TEPSINQ96N21 525 aa19.63■□□□□ 0.73
HDAC8-218ENST00000486704 BEGAINQ9BUH8 593 aa19.63■□□□□ 0.73
HDAC8-218ENST00000486704 HMG20BQ9P0W2 317 aa19.63■□□□□ 0.73
HDAC8-218ENST00000486704 TCP10L2B9ZVM9 353 aa19.62■□□□□ 0.73
HDAC8-218ENST00000486704 PPP1R12BO60237 982 aaPredicted RBP19.62■□□□□ 0.73
HDAC8-218ENST00000486704 HMMRO75330 724 aa19.62■□□□□ 0.73
HDAC8-218ENST00000486704 NBPF12Q5TAG4 269 aaPredicted RBP19.62■□□□□ 0.73
HDAC8-218ENST00000486704 ZNF512BQ96KM6 892 aaPredicted RBP19.62■□□□□ 0.73
HDAC8-218ENST00000486704 ZIC5Q96T25 663 aa19.62■□□□□ 0.73
HDAC8-218ENST00000486704 PRDM10Q9NQV6 1147 aa19.62■□□□□ 0.73
HDAC8-218ENST00000486704 ANGEL1Q9UNK9 670 aaKnown RBP19.62■□□□□ 0.73
HDAC8-218ENST00000486704 AK9Q5TCS8 1911 aa19.62■□□□□ 0.73
HDAC8-218ENST00000486704 MCAMP43121 646 aa19.61■□□□□ 0.73
HDAC8-218ENST00000486704 DZIP1Q86YF9 867 aaKnown RBP19.61■□□□□ 0.73
HDAC8-218ENST00000486704 SIRT2Q8IXJ6 389 aa19.61■□□□□ 0.73
HDAC8-218ENST00000486704 REM2Q8IYK8 340 aaPredicted RBP19.61■□□□□ 0.73
HDAC8-218ENST00000486704 DBNDD2Q9BQY9 259 aa19.61■□□□□ 0.73
HDAC8-218ENST00000486704 EXOC6BQ9Y2D4 811 aa19.61■□□□□ 0.73
HDAC8-218ENST00000486704 RFX7Q2KHR2 1363 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms