RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 WDR66Q8TBY9 1149 aa15.95■□□□□ 0.14
CHMP3-208ENST00000486404 TEKT1Q969V4 418 aa15.95■□□□□ 0.14
CHMP3-208ENST00000486404 DEFB129Q9H1M3 183 aa15.95■□□□□ 0.14
CHMP3-208ENST00000486404 C1orf115Q9H7X2 142 aa15.95■□□□□ 0.14
CHMP3-208ENST00000486404 TMOD2Q9NZR1 351 aa15.95■□□□□ 0.14
CHMP3-208ENST00000486404 MYH2Q9UKX2 1941 aa15.95■□□□□ 0.14
CHMP3-208ENST00000486404 PNMA6EA0A0J9YXQ4 647 aa15.94■□□□□ 0.14
CHMP3-208ENST00000486404 RLBP1P12271 317 aa15.94■□□□□ 0.14
CHMP3-208ENST00000486404 TFCP2Q12800 502 aa15.94■□□□□ 0.14
CHMP3-208ENST00000486404 G3BP1Q13283 466 aaKnown RBP eCLIP15.94■□□□□ 0.14
CHMP3-208ENST00000486404 COL13A1Q5TAT6 717 aaPredicted RBP15.94■□□□□ 0.14
CHMP3-208ENST00000486404 ARMC9Q7Z3E5 817 aa15.94■□□□□ 0.14
CHMP3-208ENST00000486404 PRMT6Q96LA8 375 aaPredicted RBP15.94■□□□□ 0.14
CHMP3-208ENST00000486404 SUGT1Q9Y2Z0 365 aa15.94■□□□□ 0.14
CHMP3-208ENST00000486404 AK9Q5TCS8 1911 aa15.94■□□□□ 0.14
CHMP3-208ENST00000486404 MAST2Q6P0Q8 1798 aa15.93■□□□□ 0.14
CHMP3-208ENST00000486404 SEMA3EO15041 775 aa15.93■□□□□ 0.14
CHMP3-208ENST00000486404 SLC10A3P09131 477 aa15.93■□□□□ 0.14
CHMP3-208ENST00000486404 ADORA1P30542 326 aa15.93■□□□□ 0.14
CHMP3-208ENST00000486404 HDLBPQ00341 1268 aaKnown RBP15.93■□□□□ 0.14
CHMP3-208ENST00000486404 PRKG1Q13976 671 aa15.93■□□□□ 0.14
CHMP3-208ENST00000486404 MVPQ14764 893 aaKnown RBP15.93■□□□□ 0.14
CHMP3-208ENST00000486404 SPDYE2Q495Y8 402 aa15.93■□□□□ 0.14
CHMP3-208ENST00000486404 TNS4Q8IZW8 715 aa15.93■□□□□ 0.14
CHMP3-208ENST00000486404 DENND2AQ9ULE3 1009 aa15.93■□□□□ 0.14
CHMP3-208ENST00000486404 SSC5DA1L4H1 1573 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 A0A1B0GUL7 405 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 UBE2Q2LH0YL09 131 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 CA12O43570 354 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 PHKA1P46020 1223 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 TNNI2P48788 182 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 GRIK5Q16478 980 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 GORABQ5T7V8 394 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 MOB2Q70IA6 237 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 RASAL3Q86YV0 1011 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 PANK1Q8TE04 598 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 NEUROD6Q96NK8 337 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 TDRD3Q9H7E2 651 aaKnown RBP15.92■□□□□ 0.14
CHMP3-208ENST00000486404 ZNF70Q9UC06 446 aaPredicted RBP15.92■□□□□ 0.14
CHMP3-208ENST00000486404 RCAN3Q9UKA8 241 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 AOX1Q06278 1338 aa15.92■□□□□ 0.14
CHMP3-208ENST00000486404 FAM155AB1AL88 458 aaPredicted RBP15.91■□□□□ 0.14
CHMP3-208ENST00000486404 PPP1R12BO60237 982 aaPredicted RBP15.91■□□□□ 0.14
CHMP3-208ENST00000486404 HSPA8P11142 646 aaKnown RBP15.91■□□□□ 0.14
CHMP3-208ENST00000486404 LBX1P52954 281 aa15.91■□□□□ 0.14
CHMP3-208ENST00000486404 SUPT20HL1Q3ZLR7 823 aa15.91■□□□□ 0.14
CHMP3-208ENST00000486404 CCDC102BQ68D86 513 aa15.91■□□□□ 0.14
CHMP3-208ENST00000486404 ZGPATQ8N5A5 531 aaKnown RBP15.91■□□□□ 0.14
CHMP3-208ENST00000486404 PRDM10Q9NQV6 1147 aa15.91■□□□□ 0.14
CHMP3-208ENST00000486404 ANGEL1Q9UNK9 670 aaKnown RBP15.91■□□□□ 0.14
CHMP3-208ENST00000486404 DOCK2Q92608 1830 aa15.91■□□□□ 0.14
CHMP3-208ENST00000486404 LAMB1P07942 1786 aa15.9■□□□□ 0.14
CHMP3-208ENST00000486404 TCP10L2B9ZVM9 353 aa15.9■□□□□ 0.14
CHMP3-208ENST00000486404 LDHBP07195 334 aaKnown RBP15.9■□□□□ 0.14
CHMP3-208ENST00000486404 POLA2Q14181 598 aa15.9■□□□□ 0.14
CHMP3-208ENST00000486404 RASA3Q14644 834 aa15.9■□□□□ 0.14
CHMP3-208ENST00000486404 XAGE2Q96GT9 111 aa15.9■□□□□ 0.14
CHMP3-208ENST00000486404 IREB2P48200 963 aaKnown RBP15.89■□□□□ 0.13
CHMP3-208ENST00000486404 TIMM10P62072 90 aa15.89■□□□□ 0.13
CHMP3-208ENST00000486404 KIF23Q02241 960 aaPredicted RBP15.89■□□□□ 0.13
CHMP3-208ENST00000486404 DZIP1Q86YF9 867 aaKnown RBP15.89■□□□□ 0.13
CHMP3-208ENST00000486404 ZDHHC15Q96MV8 337 aa15.89■□□□□ 0.13
CHMP3-208ENST00000486404 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.89■□□□□ 0.13
CHMP3-208ENST00000486404 TSKSQ9UJT2 592 aa15.89■□□□□ 0.13
CHMP3-208ENST00000486404 PDS5AQ29RF7 1337 aaKnown RBP15.89■□□□□ 0.13
CHMP3-208ENST00000486404 SALL1Q9NSC2 1324 aa15.89■□□□□ 0.13
CHMP3-208ENST00000486404 ZBTB7BO15156 539 aaPredicted RBP15.88■□□□□ 0.13
CHMP3-208ENST00000486404 SURF6O75683 361 aaKnown RBP15.88■□□□□ 0.13
CHMP3-208ENST00000486404 PRDX5P30044 214 aa15.88■□□□□ 0.13
CHMP3-208ENST00000486404 ATP8B2P98198 1209 aa15.88■□□□□ 0.13
CHMP3-208ENST00000486404 RASGRF1Q13972 1273 aa15.88■□□□□ 0.13
CHMP3-208ENST00000486404 IFFO2Q5TF58 517 aa15.88■□□□□ 0.13
CHMP3-208ENST00000486404 HHIPL2Q6UWX4 724 aa15.88■□□□□ 0.13
CHMP3-208ENST00000486404 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.88■□□□□ 0.13
CHMP3-208ENST00000486404 SSH3Q8TE77 659 aa15.88■□□□□ 0.13
CHMP3-208ENST00000486404 ZIC5Q96T25 663 aa15.88■□□□□ 0.13
CHMP3-208ENST00000486404 CASP8AP2Q9UKL3 1982 aa15.87■□□□□ 0.13
CHMP3-208ENST00000486404 CACNB3P54284 484 aa15.87■□□□□ 0.13
CHMP3-208ENST00000486404 MKRN3Q13064 507 aaKnown RBP15.87■□□□□ 0.13
CHMP3-208ENST00000486404 DIXDC1Q155Q3 683 aa15.87■□□□□ 0.13
CHMP3-208ENST00000486404 NBPF12Q5TAG4 269 aaPredicted RBP15.87■□□□□ 0.13
CHMP3-208ENST00000486404 REM2Q8IYK8 340 aaPredicted RBP15.87■□□□□ 0.13
CHMP3-208ENST00000486404 TMEM39BQ9GZU3 492 aa15.87■□□□□ 0.13
CHMP3-208ENST00000486404 ABCF2Q9UG63 623 aa15.87■□□□□ 0.13
CHMP3-208ENST00000486404 DDX19BQ9UMR2 479 aa15.87■□□□□ 0.13
CHMP3-208ENST00000486404 FZD1Q9UP38 647 aa15.87■□□□□ 0.13
CHMP3-208ENST00000486404 SPTY2D1Q68D10 685 aaPredicted RBP15.86■□□□□ 0.13
CHMP3-208ENST00000486404 CEP85Q6P2H3 762 aa15.86■□□□□ 0.13
CHMP3-208ENST00000486404 SLF2Q8IX21 1173 aa15.86■□□□□ 0.13
CHMP3-208ENST00000486404 MRIQ9BWK5 157 aa15.86■□□□□ 0.13
CHMP3-208ENST00000486404 CHMP4BQ9H444 224 aaKnown RBP15.86■□□□□ 0.13
CHMP3-208ENST00000486404 SAGE1Q9NXZ1 904 aa15.86■□□□□ 0.13
CHMP3-208ENST00000486404 DAGLAQ9Y4D2 1042 aa15.86■□□□□ 0.13
CHMP3-208ENST00000486404 RPAP1Q9BWH6 1393 aaPredicted RBP15.86■□□□□ 0.13
CHMP3-208ENST00000486404 TNNI3KQ59H18 835 aa15.85■□□□□ 0.13
CHMP3-208ENST00000486404 TTC39AQ5SRH9 613 aa15.85■□□□□ 0.13
CHMP3-208ENST00000486404 HOOK2Q96ED9 719 aa15.85■□□□□ 0.13
CHMP3-208ENST00000486404 COG6Q9Y2V7 657 aa15.85■□□□□ 0.13
CHMP3-208ENST00000486404 FPGT-TNNI3KV9GXZ4 949 aa15.85■□□□□ 0.13
CHMP3-208ENST00000486404 ZBTB22O15209 634 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms