RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 MS4A1P11836 297 aa11.75□□□□□ -0.53
TMEM39A-208ENST00000486159 GJA5P36382 358 aa11.75□□□□□ -0.53
TMEM39A-208ENST00000486159 TM4SF4P48230 202 aa11.75□□□□□ -0.53
TMEM39A-208ENST00000486159 RBM5P52756 815 aaKnown RBP eCLIP11.75□□□□□ -0.53
TMEM39A-208ENST00000486159 PRPF38BQ5VTL8 546 aaKnown RBP11.75□□□□□ -0.53
TMEM39A-208ENST00000486159 ZNF804AQ7Z570 1209 aa11.75□□□□□ -0.53
TMEM39A-208ENST00000486159 APOBEC3FQ8IUX4 373 aaKnown RBP11.75□□□□□ -0.53
TMEM39A-208ENST00000486159 ZNF296Q8WUU4 475 aaPredicted RBP11.75□□□□□ -0.53
TMEM39A-208ENST00000486159 TDRD3Q9H7E2 651 aaKnown RBP11.75□□□□□ -0.53
TMEM39A-208ENST00000486159 USP2O75604 605 aaPredicted RBP11.74□□□□□ -0.53
TMEM39A-208ENST00000486159 SPRYD7Q5W111 196 aa11.74□□□□□ -0.53
TMEM39A-208ENST00000486159 ARMC9Q7Z3E5 817 aa11.74□□□□□ -0.53
TMEM39A-208ENST00000486159 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
TMEM39A-208ENST00000486159 USP44Q9H0E7 712 aa11.74□□□□□ -0.53
TMEM39A-208ENST00000486159 UTYO14607 1347 aa11.74□□□□□ -0.53
TMEM39A-208ENST00000486159 GPR25O00155 361 aa11.73□□□□□ -0.53
TMEM39A-208ENST00000486159 HIBADHP31937 336 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-208ENST00000486159 NF2P35240 595 aa11.73□□□□□ -0.53
TMEM39A-208ENST00000486159 BCAMP50895 628 aa11.73□□□□□ -0.53
TMEM39A-208ENST00000486159 CHAF1AQ13111 956 aaPredicted RBP11.73□□□□□ -0.53
TMEM39A-208ENST00000486159 UBE4AQ14139 1066 aa11.73□□□□□ -0.53
TMEM39A-208ENST00000486159 RASA3Q14644 834 aa11.73□□□□□ -0.53
TMEM39A-208ENST00000486159 RABL6Q3YEC7 729 aaPredicted RBP11.73□□□□□ -0.53
TMEM39A-208ENST00000486159 MFSD14BQ5SR56 506 aa11.73□□□□□ -0.53
TMEM39A-208ENST00000486159 FAM205AQ6ZU69 1335 aa11.73□□□□□ -0.53
TMEM39A-208ENST00000486159 FBXO33Q7Z6M2 555 aa11.73□□□□□ -0.53
TMEM39A-208ENST00000486159 CTU1Q7Z7A3 348 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-208ENST00000486159 TTF2Q9UNY4 1162 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-208ENST00000486159 TCP10L2B9ZVM9 353 aa11.72□□□□□ -0.53
TMEM39A-208ENST00000486159 RARSP54136 660 aaKnown RBP11.72□□□□□ -0.53
TMEM39A-208ENST00000486159 CACNB3P54284 484 aa11.72□□□□□ -0.53
TMEM39A-208ENST00000486159 FKBP1AP62942 108 aaKnown RBP11.72□□□□□ -0.53
TMEM39A-208ENST00000486159 CAP1Q01518 475 aa11.72□□□□□ -0.53
TMEM39A-208ENST00000486159 VGLL2Q8N8G2 317 aa11.72□□□□□ -0.53
TMEM39A-208ENST00000486159 EXOC6Q8TAG9 804 aa11.72□□□□□ -0.53
TMEM39A-208ENST00000486159 SLC10A4Q96EP9 437 aa11.72□□□□□ -0.53
TMEM39A-208ENST00000486159 WNK4Q96J92 1243 aa11.72□□□□□ -0.53
TMEM39A-208ENST00000486159 ZNF70Q9UC06 446 aaPredicted RBP11.72□□□□□ -0.53
TMEM39A-208ENST00000486159 IGF2BP3O00425 579 aaKnown RBP eCLIP11.71□□□□□ -0.53
TMEM39A-208ENST00000486159 CRKP46108 304 aa11.71□□□□□ -0.53
TMEM39A-208ENST00000486159 RFX5P48382 616 aaPredicted RBP11.71□□□□□ -0.53
TMEM39A-208ENST00000486159 MAP3K11Q16584 847 aa11.71□□□□□ -0.53
TMEM39A-208ENST00000486159 METTL24Q5JXM2 366 aa11.71□□□□□ -0.53
TMEM39A-208ENST00000486159 B4GALNT3Q6L9W6 998 aa11.71□□□□□ -0.53
TMEM39A-208ENST00000486159 DZIP1LQ8IYY4 767 aaKnown RBP11.71□□□□□ -0.53
TMEM39A-208ENST00000486159 TEPSINQ96N21 525 aa11.71□□□□□ -0.53
TMEM39A-208ENST00000486159 TMEM39BQ9GZU3 492 aa11.71□□□□□ -0.53
TMEM39A-208ENST00000486159 HPS5Q9UPZ3 1129 aa11.71□□□□□ -0.53
TMEM39A-208ENST00000486159 OTOFQ9HC10 1997 aa11.7□□□□□ -0.54
TMEM39A-208ENST00000486159 MMP14P50281 582 aa11.7□□□□□ -0.54
TMEM39A-208ENST00000486159 ALDH1L2Q3SY69 923 aa11.7□□□□□ -0.54
TMEM39A-208ENST00000486159 CHRDL2Q6WN34 429 aa11.7□□□□□ -0.54
TMEM39A-208ENST00000486159 IFNL1Q8IU54 200 aa11.7□□□□□ -0.54
TMEM39A-208ENST00000486159 PTPN18Q99952 460 aa11.7□□□□□ -0.54
TMEM39A-208ENST00000486159 ARAP2Q8WZ64 1704 aa11.69□□□□□ -0.54
TMEM39A-208ENST00000486159 MROH5Q6ZUA9 1318 aa11.69□□□□□ -0.54
TMEM39A-208ENST00000486159 PDE8BO95263 885 aa11.69□□□□□ -0.54
TMEM39A-208ENST00000486159 CRBNQ96SW2 442 aa11.69□□□□□ -0.54
TMEM39A-208ENST00000486159 ELP3Q9H9T3 547 aa11.69□□□□□ -0.54
TMEM39A-208ENST00000486159 PTPRCP08575 1304 aa11.68□□□□□ -0.54
TMEM39A-208ENST00000486159 MYO1BO43795 1136 aa11.68□□□□□ -0.54
TMEM39A-208ENST00000486159 PPP1R12BO60237 982 aaPredicted RBP11.68□□□□□ -0.54
TMEM39A-208ENST00000486159 BCAR3O75815 825 aa11.68□□□□□ -0.54
TMEM39A-208ENST00000486159 FGFR2P21802 821 aa11.68□□□□□ -0.54
TMEM39A-208ENST00000486159 SREBF2Q12772 1141 aa11.68□□□□□ -0.54
TMEM39A-208ENST00000486159 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.68□□□□□ -0.54
TMEM39A-208ENST00000486159 ATG9AQ7Z3C6 839 aa11.68□□□□□ -0.54
TMEM39A-208ENST00000486159 PLCD3Q8N3E9 789 aa11.68□□□□□ -0.54
TMEM39A-208ENST00000486159 SERPINA10Q9UK55 444 aa11.68□□□□□ -0.54
TMEM39A-208ENST00000486159 NOB1Q9ULX3 412 aaKnown RBP11.68□□□□□ -0.54
TMEM39A-208ENST00000486159 COL1A1P02452 1464 aaPredicted RBP11.68□□□□□ -0.54
TMEM39A-208ENST00000486159 IPO8O15397 1037 aaKnown RBP11.67□□□□□ -0.54
TMEM39A-208ENST00000486159 FKTNO75072 461 aa11.67□□□□□ -0.54
TMEM39A-208ENST00000486159 SUPT20HL1Q3ZLR7 823 aa11.67□□□□□ -0.54
TMEM39A-208ENST00000486159 VPS37DQ86XT2 251 aa11.67□□□□□ -0.54
TMEM39A-208ENST00000486159 OPTNQ96CV9 577 aa11.67□□□□□ -0.54
TMEM39A-208ENST00000486159 SIL1Q9H173 461 aa11.67□□□□□ -0.54
TMEM39A-208ENST00000486159 SMC4Q9NTJ3 1288 aa11.67□□□□□ -0.54
TMEM39A-208ENST00000486159 PA2G4Q9UQ80 394 aaKnown RBP11.67□□□□□ -0.54
TMEM39A-208ENST00000486159 TNNQ9UQP3 1299 aa11.67□□□□□ -0.54
TMEM39A-208ENST00000486159 PPP2R3BQ9Y5P8 575 aa11.67□□□□□ -0.54
TMEM39A-208ENST00000486159 KIF16BQ96L93 1317 aa11.66□□□□□ -0.54
TMEM39A-208ENST00000486159 MANSC4A6NHS7 340 aaPredicted RBP11.66□□□□□ -0.54
TMEM39A-208ENST00000486159 EYA2O00167 538 aa11.66□□□□□ -0.54
TMEM39A-208ENST00000486159 FRAT2O75474 233 aaPredicted RBP11.66□□□□□ -0.54
TMEM39A-208ENST00000486159 IREB2P48200 963 aaKnown RBP11.66□□□□□ -0.54
TMEM39A-208ENST00000486159 CRHR2Q13324 411 aa11.66□□□□□ -0.54
TMEM39A-208ENST00000486159 ZKSCAN2Q63HK3 967 aa11.66□□□□□ -0.54
TMEM39A-208ENST00000486159 APOBEC3HQ6NTF7 200 aaKnown RBP11.66□□□□□ -0.54
TMEM39A-208ENST00000486159 CD99L2Q8TCZ2 262 aa11.66□□□□□ -0.54
TMEM39A-208ENST00000486159 MS4A4AQ96JQ5 239 aa11.66□□□□□ -0.54
TMEM39A-208ENST00000486159 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.66□□□□□ -0.54
TMEM39A-208ENST00000486159 CUL9Q8IWT3 2517 aa11.65□□□□□ -0.54
TMEM39A-208ENST00000486159 LAMB1P07942 1786 aa11.65□□□□□ -0.54
TMEM39A-208ENST00000486159 SLURP2P0DP57 97 aa11.65□□□□□ -0.54
TMEM39A-208ENST00000486159 ZBTB48P10074 688 aaPredicted RBP11.65□□□□□ -0.54
TMEM39A-208ENST00000486159 VGLL4Q14135 290 aa11.65□□□□□ -0.54
TMEM39A-208ENST00000486159 CAVIN4Q5BKX8 364 aa11.65□□□□□ -0.54
TMEM39A-208ENST00000486159 ANKRD13AQ8IZ07 590 aa11.65□□□□□ -0.54
TMEM39A-208ENST00000486159 CFHR5Q9BXR6 569 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms