RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 XAGE2Q96GT9 111 aa20.62■□□□□ 0.89
CCHCR1-214ENST00000486060 DEFB129Q9H1M3 183 aa20.62■□□□□ 0.89
CCHCR1-214ENST00000486060 ZNF70Q9UC06 446 aaPredicted RBP20.62■□□□□ 0.89
CCHCR1-214ENST00000486060 COG6Q9Y2V7 657 aa20.62■□□□□ 0.89
CCHCR1-214ENST00000486060 LAMB1P07942 1786 aa20.62■□□□□ 0.89
CCHCR1-214ENST00000486060 MVPQ14764 893 aaKnown RBP20.61■□□□□ 0.89
CCHCR1-214ENST00000486060 C20orf194Q5TEA3 1177 aa20.61■□□□□ 0.89
CCHCR1-214ENST00000486060 FZD1Q9UP38 647 aa20.61■□□□□ 0.89
CCHCR1-214ENST00000486060 UBE2Q2LH0YL09 131 aa20.6■□□□□ 0.89
CCHCR1-214ENST00000486060 PRDX5P30044 214 aa20.6■□□□□ 0.89
CCHCR1-214ENST00000486060 MAP2K2P36507 400 aa20.6■□□□□ 0.89
CCHCR1-214ENST00000486060 HDLBPQ00341 1268 aaKnown RBP20.6■□□□□ 0.89
CCHCR1-214ENST00000486060 G3BP1Q13283 466 aaKnown RBP eCLIP20.6■□□□□ 0.89
CCHCR1-214ENST00000486060 RASGRF1Q13972 1273 aa20.6■□□□□ 0.89
CCHCR1-214ENST00000486060 COL13A1Q5TAT6 717 aaPredicted RBP20.6■□□□□ 0.89
CCHCR1-214ENST00000486060 WDR66Q8TBY9 1149 aa20.6■□□□□ 0.89
CCHCR1-214ENST00000486060 VEZTQ9HBM0 779 aa20.6■□□□□ 0.89
CCHCR1-214ENST00000486060 SUGT1Q9Y2Z0 365 aa20.6■□□□□ 0.89
CCHCR1-214ENST00000486060 AK9Q5TCS8 1911 aa20.6■□□□□ 0.89
CCHCR1-214ENST00000486060 FKBP1BP68106 108 aa20.59■□□□□ 0.89
CCHCR1-214ENST00000486060 CDAN1Q8IWY9 1227 aa20.59■□□□□ 0.89
CCHCR1-214ENST00000486060 AKAP2Q9Y2D5 859 aa20.59■□□□□ 0.89
CCHCR1-214ENST00000486060 NOP58Q9Y2X3 529 aaKnown RBP20.59■□□□□ 0.89
CCHCR1-214ENST00000486060 CASP8AP2Q9UKL3 1982 aa20.59■□□□□ 0.89
CCHCR1-214ENST00000486060 SALL1Q9NSC2 1324 aa20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 SEMA3EO15041 775 aa20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 MYO1BO43795 1136 aa20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 SLC10A3P09131 477 aa20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 ZNF157P51786 506 aaPredicted RBP20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 RASA3Q14644 834 aa20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 NBPF12Q5TAG4 269 aaPredicted RBP20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 APOBEC3HQ6NTF7 200 aaKnown RBP20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 TEKT1Q969V4 418 aa20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 ZDHHC15Q96MV8 337 aa20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 NEUROD6Q96NK8 337 aa20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 MRIQ9BWK5 157 aa20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 ZBTB40Q9NUA8 1239 aa20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 DENND2AQ9ULE3 1009 aa20.58■□□□□ 0.89
CCHCR1-214ENST00000486060 SURF6O75683 361 aaKnown RBP20.57■□□□□ 0.88
CCHCR1-214ENST00000486060 MS4A1P11836 297 aa20.57■□□□□ 0.88
CCHCR1-214ENST00000486060 MAP2K1Q02750 393 aaPredicted RBP20.57■□□□□ 0.88
CCHCR1-214ENST00000486060 PRKG1Q13976 671 aa20.57■□□□□ 0.88
CCHCR1-214ENST00000486060 DIXDC1Q155Q3 683 aa20.57■□□□□ 0.88
CCHCR1-214ENST00000486060 RASAL3Q86YV0 1011 aa20.57■□□□□ 0.88
CCHCR1-214ENST00000486060 TEPSINQ96N21 525 aa20.57■□□□□ 0.88
CCHCR1-214ENST00000486060 GNL3LQ9NVN8 582 aaKnown RBP20.57■□□□□ 0.88
CCHCR1-214ENST00000486060 CACNB3P54284 484 aa20.56■□□□□ 0.88
CCHCR1-214ENST00000486060 NOGQ13253 232 aa20.56■□□□□ 0.88
CCHCR1-214ENST00000486060 HHIPL2Q6UWX4 724 aa20.56■□□□□ 0.88
CCHCR1-214ENST00000486060 PI16Q6UXB8 463 aa20.56■□□□□ 0.88
CCHCR1-214ENST00000486060 SIRT2Q8IXJ6 389 aa20.56■□□□□ 0.88
CCHCR1-214ENST00000486060 PPP2R3BQ9Y5P8 575 aa20.56■□□□□ 0.88
CCHCR1-214ENST00000486060 CDK5RAP2Q96SN8 1893 aa20.56■□□□□ 0.88
CCHCR1-214ENST00000486060 MAST3O60307 1309 aa20.55■□□□□ 0.88
CCHCR1-214ENST00000486060 PDS5AQ29RF7 1337 aaKnown RBP20.55■□□□□ 0.88
CCHCR1-214ENST00000486060 TCP10L2B9ZVM9 353 aa20.55■□□□□ 0.88
CCHCR1-214ENST00000486060 HSPA8P11142 646 aaKnown RBP20.55■□□□□ 0.88
CCHCR1-214ENST00000486060 TNNI3KQ59H18 835 aa20.55■□□□□ 0.88
CCHCR1-214ENST00000486060 GPR108Q9NPR9 543 aa20.55■□□□□ 0.88
CCHCR1-214ENST00000486060 HMG20BQ9P0W2 317 aa20.55■□□□□ 0.88
CCHCR1-214ENST00000486060 DDX19BQ9UMR2 479 aa20.55■□□□□ 0.88
CCHCR1-214ENST00000486060 DAGLAQ9Y4D2 1042 aa20.55■□□□□ 0.88
CCHCR1-214ENST00000486060 FPGT-TNNI3KV9GXZ4 949 aa20.55■□□□□ 0.88
CCHCR1-214ENST00000486060 ARID4AP29374 1257 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-214ENST00000486060 NF2P35240 595 aa20.54■□□□□ 0.88
CCHCR1-214ENST00000486060 KIF23Q02241 960 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-214ENST00000486060 TTLL12Q14166 644 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-214ENST00000486060 LDLRAD1Q5T700 205 aa20.54■□□□□ 0.88
CCHCR1-214ENST00000486060 CCDC102AQ96A19 550 aa20.54■□□□□ 0.88
CCHCR1-214ENST00000486060 DBNDD2Q9BQY9 259 aa20.54■□□□□ 0.88
CCHCR1-214ENST00000486060 TMEM39BQ9GZU3 492 aa20.54■□□□□ 0.88
CCHCR1-214ENST00000486060 LDHBP07195 334 aaKnown RBP20.53■□□□□ 0.88
CCHCR1-214ENST00000486060 CTCFP49711 727 aaPredicted RBP20.53■□□□□ 0.88
CCHCR1-214ENST00000486060 MAP3K11Q16584 847 aa20.53■□□□□ 0.88
CCHCR1-214ENST00000486060 ZNF384Q8TF68 577 aa20.53■□□□□ 0.88
CCHCR1-214ENST00000486060 AIDAQ96BJ3 306 aa20.53■□□□□ 0.88
CCHCR1-214ENST00000486060 TSKSQ9UJT2 592 aa20.53■□□□□ 0.88
CCHCR1-214ENST00000486060 ANGEL1Q9UNK9 670 aaKnown RBP20.53■□□□□ 0.88
CCHCR1-214ENST00000486060 EXOC6BQ9Y2D4 811 aa20.53■□□□□ 0.88
CCHCR1-214ENST00000486060 MAST2Q6P0Q8 1798 aa20.53■□□□□ 0.88
CCHCR1-214ENST00000486060 MCAMP43121 646 aa20.52■□□□□ 0.88
CCHCR1-214ENST00000486060 LBX1P52954 281 aa20.52■□□□□ 0.88
CCHCR1-214ENST00000486060 OS9Q13438 667 aaPredicted RBP20.52■□□□□ 0.88
CCHCR1-214ENST00000486060 PDE3AQ14432 1141 aa20.52■□□□□ 0.88
CCHCR1-214ENST00000486060 TLR7Q9NYK1 1049 aaKnown RBP20.52■□□□□ 0.88
CCHCR1-214ENST00000486060 DOCK2Q92608 1830 aa20.52■□□□□ 0.88
CCHCR1-214ENST00000486060 USP2O75604 605 aaPredicted RBP20.51■□□□□ 0.87
CCHCR1-214ENST00000486060 CDC42EP5Q6NZY7 148 aa20.51■□□□□ 0.87
CCHCR1-214ENST00000486060 TBC1D9Q6ZT07 1266 aa20.51■□□□□ 0.87
CCHCR1-214ENST00000486060 ARMC9Q7Z3E5 817 aa20.51■□□□□ 0.87
CCHCR1-214ENST00000486060 EAF2Q96CJ1 260 aaPredicted RBP20.51■□□□□ 0.87
CCHCR1-214ENST00000486060 CLMNQ96JQ2 1002 aa20.51■□□□□ 0.87
CCHCR1-214ENST00000486060 CSRNP1Q96S65 589 aa20.51■□□□□ 0.87
CCHCR1-214ENST00000486060 DBNLQ9UJU6 430 aaKnown RBP20.51■□□□□ 0.87
CCHCR1-214ENST00000486060 TNFAIP1Q13829 316 aa20.5■□□□□ 0.87
CCHCR1-214ENST00000486060 SPATA5Q8NB90 893 aa20.5■□□□□ 0.87
CCHCR1-214ENST00000486060 YTHDC1Q96MU7 727 aaKnown RBP20.5■□□□□ 0.87
CCHCR1-214ENST00000486060 ABCF2Q9UG63 623 aa20.5■□□□□ 0.87
CCHCR1-214ENST00000486060 GAKO14976 1311 aa20.5■□□□□ 0.87
CCHCR1-214ENST00000486060 FOCADQ5VW36 1801 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms