RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 PLIN1O60240 522 aa7.21□□□□□ -1.26
CUX1-208ENST00000485792 ECE2O60344 883 aa7.21□□□□□ -1.26
CUX1-208ENST00000485792 RAD17O75943 681 aa7.21□□□□□ -1.26
CUX1-208ENST00000485792 UFL1O94874 794 aa7.21□□□□□ -1.26
CUX1-208ENST00000485792 FSTL1Q12841 308 aa7.21□□□□□ -1.26
CUX1-208ENST00000485792 ATF7IPQ6VMQ6 1270 aa7.21□□□□□ -1.26
CUX1-208ENST00000485792 SPNS2Q8IVW8 549 aa7.21□□□□□ -1.26
CUX1-208ENST00000485792 PANK1Q8TE04 598 aa7.21□□□□□ -1.26
CUX1-208ENST00000485792 ZC3H15Q8WU90 426 aaKnown RBP7.21□□□□□ -1.26
CUX1-208ENST00000485792 JDP2Q8WYK2 163 aa7.21□□□□□ -1.26
CUX1-208ENST00000485792 DPF2Q92785 391 aa7.21□□□□□ -1.26
CUX1-208ENST00000485792 API5Q9BZZ5 524 aaKnown RBP7.21□□□□□ -1.26
CUX1-208ENST00000485792 C9orf78Q9NZ63 289 aaPredicted RBP7.21□□□□□ -1.26
CUX1-208ENST00000485792 NSFL1CQ9UNZ2 370 aaKnown RBP7.21□□□□□ -1.26
CUX1-208ENST00000485792 LEMD3Q9Y2U8 911 aa7.21□□□□□ -1.26
CUX1-208ENST00000485792 LRRFIP2Q9Y608 721 aaKnown RBP7.21□□□□□ -1.26
CUX1-208ENST00000485792 ITGBL1O95965 494 aaPredicted RBP7.2□□□□□ -1.26
CUX1-208ENST00000485792 VIL1P09327 827 aaKnown RBP7.2□□□□□ -1.26
CUX1-208ENST00000485792 FGFR2P21802 821 aa7.2□□□□□ -1.26
CUX1-208ENST00000485792 ATP2B4P23634 1241 aa7.2□□□□□ -1.26
CUX1-208ENST00000485792 GMPSP49915 693 aaPredicted RBP7.2□□□□□ -1.26
CUX1-208ENST00000485792 LSM11P83369 360 aaKnown RBP eCLIP7.2□□□□□ -1.26
CUX1-208ENST00000485792 IFIT5Q13325 482 aaKnown RBP7.2□□□□□ -1.26
CUX1-208ENST00000485792 WASHC4Q2M389 1173 aa7.2□□□□□ -1.26
CUX1-208ENST00000485792 SIRT2Q8IXJ6 389 aa7.2□□□□□ -1.26
CUX1-208ENST00000485792 LARGE2Q8N3Y3 721 aa7.2□□□□□ -1.26
CUX1-208ENST00000485792 ADAM33Q9BZ11 813 aa7.2□□□□□ -1.26
CUX1-208ENST00000485792 GGA1Q9UJY5 639 aa7.2□□□□□ -1.26
CUX1-208ENST00000485792 SCAF8Q9UPN6 1271 aaKnown RBP7.2□□□□□ -1.26
CUX1-208ENST00000485792 ANKRD18BA2A2Z9 1011 aa7.19□□□□□ -1.26
CUX1-208ENST00000485792 IQCA1LA6NCM1 817 aa7.19□□□□□ -1.26
CUX1-208ENST00000485792 IPO8O15397 1037 aaKnown RBP7.19□□□□□ -1.26
CUX1-208ENST00000485792 PRKCSHP14314 528 aaPredicted RBP7.19□□□□□ -1.26
CUX1-208ENST00000485792 TSR1Q2NL82 804 aaKnown RBP7.19□□□□□ -1.26
CUX1-208ENST00000485792 DACT2Q5SW24 774 aa7.19□□□□□ -1.26
CUX1-208ENST00000485792 PODNQ7Z5L7 613 aa7.19□□□□□ -1.26
CUX1-208ENST00000485792 NIM1KQ8IY84 436 aa7.19□□□□□ -1.26
CUX1-208ENST00000485792 DNAJC5GQ8N7S2 189 aa7.19□□□□□ -1.26
CUX1-208ENST00000485792 EYA3Q99504 573 aa7.19□□□□□ -1.26
CUX1-208ENST00000485792 ANKRD2Q9GZV1 360 aa7.19□□□□□ -1.26
CUX1-208ENST00000485792 CDHR5Q9HBB8 845 aa7.19□□□□□ -1.26
CUX1-208ENST00000485792 GPRC5DQ9NZD1 345 aa7.19□□□□□ -1.26
CUX1-208ENST00000485792 JAG2Q9Y219 1238 aa7.19□□□□□ -1.26
CUX1-208ENST00000485792 RFX7Q2KHR2 1363 aa7.19□□□□□ -1.26
CUX1-208ENST00000485792 TRAF5O00463 557 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 ZBTB7BO15156 539 aaPredicted RBP7.18□□□□□ -1.26
CUX1-208ENST00000485792 IL1R1P14778 569 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 HSPA6P17066 643 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 RPS12P25398 132 aaKnown RBP7.18□□□□□ -1.26
CUX1-208ENST00000485792 ADORA1P30542 326 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 IGHMBP2P38935 993 aaKnown RBP7.18□□□□□ -1.26
CUX1-208ENST00000485792 MMP14P50281 582 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 EIF6P56537 245 aaKnown RBP7.18□□□□□ -1.26
CUX1-208ENST00000485792 UBE4AQ14139 1066 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 CIAPIN1Q6FI81 312 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 POTEEQ6S8J3 1075 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 SAMD7Q7Z3H4 446 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 ZNF384Q8TF68 577 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 ZBED3Q96IU2 234 aaPredicted RBP7.18□□□□□ -1.26
CUX1-208ENST00000485792 KCNK17Q96T54 332 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 ZC3H12CQ9C0D7 883 aaKnown RBP7.18□□□□□ -1.26
CUX1-208ENST00000485792 TMX4Q9H1E5 349 aaPredicted RBP7.18□□□□□ -1.26
CUX1-208ENST00000485792 COPRSQ9NQ92 184 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 ANKIB1Q9P2G1 1089 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 HACL1Q9UJ83 578 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 ZNF804BA4D1E1 1349 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 HTTP42858 3142 aa7.18□□□□□ -1.26
CUX1-208ENST00000485792 ZSWIM8A7E2V4 1837 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 AK9Q5TCS8 1911 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 C6orf229H3BNL8 230 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 CIAO1O76071 339 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 GNAI3P08754 354 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 EPHX2P34913 555 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 GYG1P46976 350 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 PSEN2P49810 448 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 ZNF280AP59817 542 aaPredicted RBP7.17□□□□□ -1.26
CUX1-208ENST00000485792 PTGDRQ13258 359 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 TNIP1Q15025 636 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 CCDC57Q2TAC2 916 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 C6orf132Q5T0Z8 1188 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 ZKSCAN2Q63HK3 967 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 MAP1SQ66K74 1059 aaPredicted RBP7.17□□□□□ -1.26
CUX1-208ENST00000485792 LDHAL6AQ6ZMR3 332 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 USP50Q70EL3 339 aaPredicted RBP7.17□□□□□ -1.26
CUX1-208ENST00000485792 FBXO33Q7Z6M2 555 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 PNMA8AQ86V59 439 aaPredicted RBP7.17□□□□□ -1.26
CUX1-208ENST00000485792 LDHDQ86WU2 507 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 SMC1BQ8NDV3 1235 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 AGBL3Q8NEM8 1001 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 FRAT1Q92837 279 aaPredicted RBP7.17□□□□□ -1.26
CUX1-208ENST00000485792 MPHOSPH8Q99549 860 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 COA1Q9GZY4 146 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 TLR7Q9NYK1 1049 aaKnown RBP7.17□□□□□ -1.26
CUX1-208ENST00000485792 HDAC5Q9UQL6 1122 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 GJA3Q9Y6H8 435 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 FAM205AQ6ZU69 1335 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 MROH5Q6ZUA9 1318 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 PHIPQ8WWQ0 1821 aa7.17□□□□□ -1.26
CUX1-208ENST00000485792 ADM5C9JUS6 153 aa7.16□□□□□ -1.26
CUX1-208ENST00000485792 EYA2O00167 538 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms