RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 KIF4BQ2VIQ3 1234 aa11.41□□□□□ -0.58
SHROOM3-207ENST00000485780 CCDC158Q5M9N0 1113 aa11.41□□□□□ -0.58
SHROOM3-207ENST00000485780 TBC1D22AQ8WUA7 517 aa11.41□□□□□ -0.58
SHROOM3-207ENST00000485780 DCPSQ96C86 337 aaKnown RBP11.41□□□□□ -0.58
SHROOM3-207ENST00000485780 ZNF408Q9H9D4 720 aa11.41□□□□□ -0.58
SHROOM3-207ENST00000485780 PGAP2Q9UHJ9 254 aa11.41□□□□□ -0.58
SHROOM3-207ENST00000485780 SUGT1Q9Y2Z0 365 aa11.41□□□□□ -0.58
SHROOM3-207ENST00000485780 TTC41PQ6P2S7 1318 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 IGSF3O75054 1194 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 ATP5JP18859 108 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 GRM1Q13255 1194 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 SCARF1Q14162 830 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 MFSD14BQ5SR56 506 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 GORABQ5T7V8 394 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 ANKRD45Q5TZF3 282 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 CENPQQ7L2Z9 268 aaPredicted RBP11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 USP48Q86UV5 1035 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 CHD1LQ86WJ1 897 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 SPATA5Q8NB90 893 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 WDR66Q8TBY9 1149 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 AIDAQ96BJ3 306 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 HMG20BQ9P0W2 317 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 STAP2Q9UGK3 403 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 IQSEC3Q9UPP2 1182 aaPredicted RBP11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 MYH2Q9UKX2 1941 aa11.4□□□□□ -0.58
SHROOM3-207ENST00000485780 USP17L8P0C7I0 530 aa11.39□□□□□ -0.59
SHROOM3-207ENST00000485780 ECE1P42892 770 aa11.39□□□□□ -0.59
SHROOM3-207ENST00000485780 ZNF280AP59817 542 aaPredicted RBP11.39□□□□□ -0.59
SHROOM3-207ENST00000485780 TTC39AQ5SRH9 613 aa11.39□□□□□ -0.59
SHROOM3-207ENST00000485780 PI16Q6UXB8 463 aa11.39□□□□□ -0.59
SHROOM3-207ENST00000485780 KRT26Q7Z3Y9 468 aa11.39□□□□□ -0.59
SHROOM3-207ENST00000485780 ECHDC1Q9NTX5 307 aa11.39□□□□□ -0.59
SHROOM3-207ENST00000485780 PPP4R2Q9NY27 417 aa11.39□□□□□ -0.59
SHROOM3-207ENST00000485780 AK9Q5TCS8 1911 aa11.39□□□□□ -0.59
SHROOM3-207ENST00000485780 AOX1Q06278 1338 aa11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 WDR33Q9C0J8 1336 aaKnown RBP11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 EGFRP00533 1210 aa11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 MX1P20591 662 aa11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 CST9Q5W186 159 aa11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 SULF1Q8IWU6 871 aa11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 OGFOD1Q8N543 542 aa11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 ZGPATQ8N5A5 531 aaKnown RBP11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 PI4K2BQ8TCG2 481 aa11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 OTUD7AQ8TE49 926 aaPredicted RBP11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 MXD3Q9BW11 206 aa11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 LNPKQ9C0E8 428 aa11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 OSBPL3Q9H4L5 887 aa11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 MYOZ2Q9NPC6 264 aa11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 GGA3Q9NZ52 723 aa11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 TLL2Q9Y6L7 1015 aa11.38□□□□□ -0.59
SHROOM3-207ENST00000485780 FRAT2O75474 233 aaPredicted RBP11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 CYP2E1P05181 493 aaPredicted RBP11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 PDE1AP54750 535 aa11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 HDLBPQ00341 1268 aaKnown RBP11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 CHAF1AQ13111 956 aaPredicted RBP11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 GRIK5Q16478 980 aa11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 CYP4F22Q6NT55 531 aa11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 ZBED3Q96IU2 234 aaPredicted RBP11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 CCDC136Q96JN2 1154 aa11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 CAPNS2Q96L46 248 aa11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 HAUS7Q99871 368 aa11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 MRIQ9BWK5 157 aa11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 HDAC9Q9UKV0 1011 aa11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 JAG2Q9Y219 1238 aa11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 CDK5RAP2Q96SN8 1893 aa11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 FOCADQ5VW36 1801 aa11.37□□□□□ -0.59
SHROOM3-207ENST00000485780 MAST3O60307 1309 aa11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 ADM5C9JUS6 153 aa11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 PDE4AP27815 886 aa11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 PRDX5P30044 214 aa11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 ZAP70P43403 619 aa11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 IFFO2Q5TF58 517 aa11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 ANGEL2Q5VTE6 544 aaKnown RBP11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 B4GALNT3Q6L9W6 998 aa11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 TMED8Q6PL24 325 aaPredicted RBP11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 PLEKHM2Q8IWE5 1019 aa11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 C2orf69Q8N8R5 385 aa11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 MTMR14Q8NCE2 650 aa11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 GPATCH3Q96I76 525 aa11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 ZBTB47Q9UFB7 747 aaPredicted RBP11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 TRPM7Q96QT4 1865 aa11.36□□□□□ -0.59
SHROOM3-207ENST00000485780 ERC2O15083 957 aa11.35□□□□□ -0.59
SHROOM3-207ENST00000485780 GLRX3O76003 335 aaKnown RBP11.35□□□□□ -0.59
SHROOM3-207ENST00000485780 MAP2K1Q02750 393 aaPredicted RBP11.35□□□□□ -0.59
SHROOM3-207ENST00000485780 SAPCD2Q86UD0 394 aa11.35□□□□□ -0.59
SHROOM3-207ENST00000485780 KIAA0825Q8IV33 1275 aa11.35□□□□□ -0.59
SHROOM3-207ENST00000485780 ZNF384Q8TF68 577 aa11.35□□□□□ -0.59
SHROOM3-207ENST00000485780 BEGAINQ9BUH8 593 aa11.35□□□□□ -0.59
SHROOM3-207ENST00000485780 SERPINA10Q9UK55 444 aa11.35□□□□□ -0.59
SHROOM3-207ENST00000485780 POLR2AP24928 1970 aaKnown RBP11.35□□□□□ -0.59
SHROOM3-207ENST00000485780 GAKO14976 1311 aa11.35□□□□□ -0.59
SHROOM3-207ENST00000485780 ASTN2O75129 1339 aaPredicted RBP11.35□□□□□ -0.59
SHROOM3-207ENST00000485780 FOXN1O15353 648 aa11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 LDHBP07195 334 aaKnown RBP11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 CTCFP49711 727 aaPredicted RBP11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 HUNKP57058 714 aa11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 TTF1Q15361 905 aaPredicted RBP11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 COL13A1Q5TAT6 717 aaPredicted RBP11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 TSHZ3Q63HK5 1081 aa11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 SPTY2D1Q68D10 685 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms