RNA–Protein interactions for RNA: ENST00000485124.1

TMEM40-208, Transcript of transmembrane protein 40, humanhuman

TSL 5

Gene TMEM40, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-208ENST00000485124 MYH13Q9UKX3 1938 aa12.41□□□□□ -0.42
TMEM40-208ENST00000485124 CLRN2A0PK11 232 aa12.4□□□□□ -0.42
TMEM40-208ENST00000485124 TESPA1A2RU30 521 aaPredicted RBP12.4□□□□□ -0.42
TMEM40-208ENST00000485124 USP2O75604 605 aaPredicted RBP12.4□□□□□ -0.42
TMEM40-208ENST00000485124 PDE8BO95263 885 aa12.4□□□□□ -0.42
TMEM40-208ENST00000485124 GYG1P46976 350 aa12.4□□□□□ -0.42
TMEM40-208ENST00000485124 TNNI2P48788 182 aa12.4□□□□□ -0.42
TMEM40-208ENST00000485124 RBM5P52756 815 aaKnown RBP eCLIP12.4□□□□□ -0.42
TMEM40-208ENST00000485124 CAVIN4Q5BKX8 364 aa12.4□□□□□ -0.42
TMEM40-208ENST00000485124 NBPF12Q5TAG4 269 aaPredicted RBP12.4□□□□□ -0.42
TMEM40-208ENST00000485124 OTUD7BQ6GQQ9 843 aa12.4□□□□□ -0.42
TMEM40-208ENST00000485124 VGLL2Q8N8G2 317 aa12.4□□□□□ -0.42
TMEM40-208ENST00000485124 PUS3Q9BZE2 481 aaKnown RBP12.4□□□□□ -0.42
TMEM40-208ENST00000485124 BICC1Q9H694 974 aaKnown RBP12.4□□□□□ -0.42
TMEM40-208ENST00000485124 VEZTQ9HBM0 779 aa12.4□□□□□ -0.42
TMEM40-208ENST00000485124 ZNF70Q9UC06 446 aaPredicted RBP12.4□□□□□ -0.42
TMEM40-208ENST00000485124 PCDHAC2Q9Y5I4 1007 aa12.4□□□□□ -0.42
TMEM40-208ENST00000485124 MKRN3Q13064 507 aaKnown RBP12.39□□□□□ -0.43
TMEM40-208ENST00000485124 ALDH1L2Q3SY69 923 aa12.39□□□□□ -0.43
TMEM40-208ENST00000485124 VPS37DQ86XT2 251 aa12.39□□□□□ -0.43
TMEM40-208ENST00000485124 DZIP1LQ8IYY4 767 aaKnown RBP12.39□□□□□ -0.43
TMEM40-208ENST00000485124 ANKRD44Q8N8A2 993 aa12.39□□□□□ -0.43
TMEM40-208ENST00000485124 MAST3O60307 1309 aa12.38□□□□□ -0.43
TMEM40-208ENST00000485124 RBBP6Q7Z6E9 1792 aaKnown RBP12.38□□□□□ -0.43
TMEM40-208ENST00000485124 ZBTB22O15209 634 aa12.38□□□□□ -0.43
TMEM40-208ENST00000485124 CRKP46108 304 aa12.38□□□□□ -0.43
TMEM40-208ENST00000485124 METTL24Q5JXM2 366 aa12.38□□□□□ -0.43
TMEM40-208ENST00000485124 FKBP1CQ5VVH2 108 aa12.38□□□□□ -0.43
TMEM40-208ENST00000485124 CLMNQ96JQ2 1002 aa12.38□□□□□ -0.43
TMEM40-208ENST00000485124 TEPSINQ96N21 525 aa12.38□□□□□ -0.43
TMEM40-208ENST00000485124 USP44Q9H0E7 712 aa12.38□□□□□ -0.43
TMEM40-208ENST00000485124 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
TMEM40-208ENST00000485124 JAG2Q9Y219 1238 aa12.38□□□□□ -0.43
TMEM40-208ENST00000485124 CENPFP49454 3210 aa12.38□□□□□ -0.43
TMEM40-208ENST00000485124 AOX1Q06278 1338 aa12.37□□□□□ -0.43
TMEM40-208ENST00000485124 IGF2BP3O00425 579 aaKnown RBP eCLIP12.37□□□□□ -0.43
TMEM40-208ENST00000485124 CT47B1P0C2W7 299 aaPredicted RBP12.37□□□□□ -0.43
TMEM40-208ENST00000485124 SOX10P56693 466 aa12.37□□□□□ -0.43
TMEM40-208ENST00000485124 SLFN5Q08AF3 891 aa12.37□□□□□ -0.43
TMEM40-208ENST00000485124 PUM3Q15397 648 aaKnown RBP12.37□□□□□ -0.43
TMEM40-208ENST00000485124 FAM83AQ86UY5 434 aa12.37□□□□□ -0.43
TMEM40-208ENST00000485124 TRMT2AQ8IZ69 625 aaKnown RBP12.37□□□□□ -0.43
TMEM40-208ENST00000485124 SSH1Q8WYL5 1049 aa12.37□□□□□ -0.43
TMEM40-208ENST00000485124 TEKT1Q969V4 418 aa12.37□□□□□ -0.43
TMEM40-208ENST00000485124 HOOK2Q96ED9 719 aa12.37□□□□□ -0.43
TMEM40-208ENST00000485124 TDRD3Q9H7E2 651 aaKnown RBP12.37□□□□□ -0.43
TMEM40-208ENST00000485124 FZD1Q9UP38 647 aa12.37□□□□□ -0.43
TMEM40-208ENST00000485124 RPAP1Q9BWH6 1393 aaPredicted RBP12.37□□□□□ -0.43
TMEM40-208ENST00000485124 FGFR2P21802 821 aa12.36□□□□□ -0.43
TMEM40-208ENST00000485124 LRRC24Q50LG9 513 aa12.36□□□□□ -0.43
TMEM40-208ENST00000485124 INTS3Q68E01 1043 aaKnown RBP12.36□□□□□ -0.43
TMEM40-208ENST00000485124 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.36□□□□□ -0.43
TMEM40-208ENST00000485124 ERO1AQ96HE7 468 aa12.36□□□□□ -0.43
TMEM40-208ENST00000485124 ZDHHC15Q96MV8 337 aa12.36□□□□□ -0.43
TMEM40-208ENST00000485124 R3HDMLQ9H3Y0 253 aa12.36□□□□□ -0.43
TMEM40-208ENST00000485124 HDAC5Q9UQL6 1122 aa12.36□□□□□ -0.43
TMEM40-208ENST00000485124 FRAT2O75474 233 aaPredicted RBP12.35□□□□□ -0.43
TMEM40-208ENST00000485124 IFIT1P09914 478 aaKnown RBP12.35□□□□□ -0.43
TMEM40-208ENST00000485124 GJA5P36382 358 aa12.35□□□□□ -0.43
TMEM40-208ENST00000485124 HHIPL2Q6UWX4 724 aa12.35□□□□□ -0.43
TMEM40-208ENST00000485124 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.35□□□□□ -0.43
TMEM40-208ENST00000485124 MS4A4AQ96JQ5 239 aa12.35□□□□□ -0.43
TMEM40-208ENST00000485124 ZCCHC17Q9NP64 241 aaKnown RBP12.35□□□□□ -0.43
TMEM40-208ENST00000485124 TMOD2Q9NZR1 351 aa12.35□□□□□ -0.43
TMEM40-208ENST00000485124 RBM19Q9Y4C8 960 aaKnown RBP12.35□□□□□ -0.43
TMEM40-208ENST00000485124 EYA2O00167 538 aa12.34□□□□□ -0.43
TMEM40-208ENST00000485124 RFX5P48382 616 aaPredicted RBP12.34□□□□□ -0.43
TMEM40-208ENST00000485124 GTF2A2P52657 109 aa12.34□□□□□ -0.43
TMEM40-208ENST00000485124 MAP3K9P80192 1104 aa12.34□□□□□ -0.43
TMEM40-208ENST00000485124 PRPF38BQ5VTL8 546 aaKnown RBP12.34□□□□□ -0.43
TMEM40-208ENST00000485124 OTOP1Q7RTM1 612 aa12.34□□□□□ -0.43
TMEM40-208ENST00000485124 EXOC6Q8TAG9 804 aa12.34□□□□□ -0.43
TMEM40-208ENST00000485124 WDR66Q8TBY9 1149 aa12.34□□□□□ -0.43
TMEM40-208ENST00000485124 LPIN2Q92539 896 aa12.34□□□□□ -0.43
TMEM40-208ENST00000485124 OPTNQ96CV9 577 aa12.34□□□□□ -0.43
TMEM40-208ENST00000485124 CSADQ9Y600 493 aa12.34□□□□□ -0.43
TMEM40-208ENST00000485124 MKI67P46013 3256 aaKnown RBP12.33□□□□□ -0.44
TMEM40-208ENST00000485124 KIAA0100Q14667 2235 aaKnown RBP12.33□□□□□ -0.44
TMEM40-208ENST00000485124 SPDYE5A6NIY4 337 aa12.33□□□□□ -0.44
TMEM40-208ENST00000485124 TCP10L2B9ZVM9 353 aa12.33□□□□□ -0.44
TMEM40-208ENST00000485124 CIAO1O76071 339 aa12.33□□□□□ -0.44
TMEM40-208ENST00000485124 SLC5A1P13866 664 aa12.33□□□□□ -0.44
TMEM40-208ENST00000485124 CHAF1AQ13111 956 aaPredicted RBP12.33□□□□□ -0.44
TMEM40-208ENST00000485124 CRHR2Q13324 411 aa12.33□□□□□ -0.44
TMEM40-208ENST00000485124 ARHGEF6Q15052 776 aa12.33□□□□□ -0.44
TMEM40-208ENST00000485124 PTPN18Q99952 460 aa12.33□□□□□ -0.44
TMEM40-208ENST00000485124 TMEM39BQ9GZU3 492 aa12.33□□□□□ -0.44
TMEM40-208ENST00000485124 ELP3Q9H9T3 547 aa12.33□□□□□ -0.44
TMEM40-208ENST00000485124 TRIM17Q9Y577 477 aa12.33□□□□□ -0.44
TMEM40-208ENST00000485124 BRCA2P51587 3418 aa12.33□□□□□ -0.44
TMEM40-208ENST00000485124 SEMA3EO15041 775 aa12.32□□□□□ -0.44
TMEM40-208ENST00000485124 WDHD1O75717 1129 aaPredicted RBP12.32□□□□□ -0.44
TMEM40-208ENST00000485124 BCAMP50895 628 aa12.32□□□□□ -0.44
TMEM40-208ENST00000485124 SP3Q02447 781 aa12.32□□□□□ -0.44
TMEM40-208ENST00000485124 VGLL4Q14135 290 aa12.32□□□□□ -0.44
TMEM40-208ENST00000485124 GRIK5Q16478 980 aa12.32□□□□□ -0.44
TMEM40-208ENST00000485124 DCAF15Q66K64 600 aa12.32□□□□□ -0.44
TMEM40-208ENST00000485124 APOBEC3HQ6NTF7 200 aaKnown RBP12.32□□□□□ -0.44
TMEM40-208ENST00000485124 ERO1BQ86YB8 467 aa12.32□□□□□ -0.44
TMEM40-208ENST00000485124 SMC4Q9NTJ3 1288 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms