RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 SF3B3Q15393 1217 aaKnown RBP7.89□□□□□ -1.15
PTCD3-215ENST00000484203 LINC01559Q495D7 138 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 ZNF697Q5TEC3 545 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 ZNF598Q86UK7 904 aaKnown RBP7.89□□□□□ -1.15
PTCD3-215ENST00000484203 SP8Q8IXZ3 490 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 GPC2Q8N158 579 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 LARGE2Q8N3Y3 721 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 ZBTB38Q8NAP3 1195 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-215ENST00000484203 CCDC191Q8NCU4 936 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 GRAPLQ8TC17 118 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-215ENST00000484203 ISCA1Q9BUE6 129 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 MYH16Q9H6N6 1097 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 SNRKQ9NRH2 765 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 ZNF277Q9NRM2 450 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-215ENST00000484203 KIAA1551Q9HCM1 1747 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 LMOD1P29536 600 aaPredicted RBP7.88□□□□□ -1.15
PTCD3-215ENST00000484203 PRELPP51888 382 aa7.88□□□□□ -1.15
PTCD3-215ENST00000484203 KRT24Q2M2I5 525 aa7.88□□□□□ -1.15
PTCD3-215ENST00000484203 DPP8Q6V1X1 898 aaPredicted RBP7.88□□□□□ -1.15
PTCD3-215ENST00000484203 LDHDQ86WU2 507 aa7.88□□□□□ -1.15
PTCD3-215ENST00000484203 NIM1KQ8IY84 436 aa7.88□□□□□ -1.15
PTCD3-215ENST00000484203 EPS8L1Q8TE68 723 aa7.88□□□□□ -1.15
PTCD3-215ENST00000484203 BAP1Q92560 729 aa7.88□□□□□ -1.15
PTCD3-215ENST00000484203 RTFDC1Q9BY42 306 aaPredicted RBP7.88□□□□□ -1.15
PTCD3-215ENST00000484203 HACL1Q9UJ83 578 aa7.88□□□□□ -1.15
PTCD3-215ENST00000484203 ELL2O00472 640 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-215ENST00000484203 IRS4O14654 1257 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-215ENST00000484203 DDNO94850 711 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-215ENST00000484203 HCLS1P14317 486 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-215ENST00000484203 TWISTNBQ3B726 338 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-215ENST00000484203 CCDC152Q4G0S7 254 aa7.87□□□□□ -1.15
PTCD3-215ENST00000484203 KSR2Q6VAB6 950 aa7.87□□□□□ -1.15
PTCD3-215ENST00000484203 MPNDQ8N594 471 aa7.87□□□□□ -1.15
PTCD3-215ENST00000484203 C8orf58Q8NAV2 365 aa7.87□□□□□ -1.15
PTCD3-215ENST00000484203 ARMC2Q8NEN0 867 aa7.87□□□□□ -1.15
PTCD3-215ENST00000484203 METTL22Q9BUU2 404 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-215ENST00000484203 CWC25Q9NXE8 425 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-215ENST00000484203 ARFGEF1Q9Y6D6 1849 aa7.87□□□□□ -1.15
PTCD3-215ENST00000484203 N4BP2Q86UW6 1770 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-215ENST00000484203 ABCC4O15439 1325 aa7.86□□□□□ -1.15
PTCD3-215ENST00000484203 PPIP5K2O43314 1243 aa7.86□□□□□ -1.15
PTCD3-215ENST00000484203 PCCAP05165 728 aaPredicted RBP7.86□□□□□ -1.15
PTCD3-215ENST00000484203 TNIP1Q15025 636 aa7.86□□□□□ -1.15
PTCD3-215ENST00000484203 FAM89AQ96GI7 184 aa7.86□□□□□ -1.15
PTCD3-215ENST00000484203 EYA3Q99504 573 aa7.86□□□□□ -1.15
PTCD3-215ENST00000484203 TAF1DQ9H5J8 278 aaPredicted RBP7.86□□□□□ -1.15
PTCD3-215ENST00000484203 ZNRF3Q9ULT6 936 aa7.86□□□□□ -1.15
PTCD3-215ENST00000484203 KDM3BQ7LBC6 1761 aa7.86□□□□□ -1.15
PTCD3-215ENST00000484203 CDHR2Q9BYE9 1310 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 POTECB2RU33 542 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 ATP5J2-PTCD1G3V325 749 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 PDE8AO60658 829 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 EPHX2P34913 555 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 WNT7BP56706 349 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 RPS8P62241 208 aaKnown RBP7.85□□□□□ -1.15
PTCD3-215ENST00000484203 SH3BP2P78314 561 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 SKOR1P84550 965 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 KIAA2012Q0VF49 1180 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 FOXC1Q12948 553 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 ZNF511Q8NB15 262 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 MTMR14Q8NCE2 650 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 PNMA1Q8ND90 353 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 KLRG1Q96E93 195 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 CDC5LQ99459 802 aaKnown RBP7.85□□□□□ -1.15
PTCD3-215ENST00000484203 TRIM34Q9BYJ4 488 aa7.85□□□□□ -1.15
PTCD3-215ENST00000484203 LAMB4A4D0S4 1761 aa7.84□□□□□ -1.15
PTCD3-215ENST00000484203 BCORQ6W2J9 1755 aa7.84□□□□□ -1.15
PTCD3-215ENST00000484203 BRCA1P38398 1863 aaKnown RBP7.84□□□□□ -1.15
PTCD3-215ENST00000484203 PI4KAP2A4QPH2 592 aa7.84□□□□□ -1.15
PTCD3-215ENST00000484203 APBB1O00213 710 aa7.84□□□□□ -1.15
PTCD3-215ENST00000484203 OLFM4Q6UX06 510 aa7.84□□□□□ -1.15
PTCD3-215ENST00000484203 USP50Q70EL3 339 aaPredicted RBP7.84□□□□□ -1.15
PTCD3-215ENST00000484203 DNAJC5GQ8N7S2 189 aa7.84□□□□□ -1.15
PTCD3-215ENST00000484203 PI4KAP1Q8N8J0 262 aa7.84□□□□□ -1.15
PTCD3-215ENST00000484203 TSR2Q969E8 191 aaKnown RBP7.84□□□□□ -1.15
PTCD3-215ENST00000484203 MYD88Q99836 296 aa7.84□□□□□ -1.15
PTCD3-215ENST00000484203 PHAXQ9H814 394 aaKnown RBP7.84□□□□□ -1.15
PTCD3-215ENST00000484203 FKBPLQ9UIM3 349 aa7.84□□□□□ -1.15
PTCD3-215ENST00000484203 MAP3K2Q9Y2U5 619 aa7.84□□□□□ -1.15
PTCD3-215ENST00000484203 ZNF541Q9H0D2 1346 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 FANCIQ9NVI1 1328 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 AFDNP55196 1824 aaKnown RBP7.83□□□□□ -1.16
PTCD3-215ENST00000484203 TCERG1O14776 1098 aaKnown RBP7.83□□□□□ -1.16
PTCD3-215ENST00000484203 RPS12P25398 132 aaKnown RBP7.83□□□□□ -1.16
PTCD3-215ENST00000484203 FLIIQ13045 1269 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 MCM6Q14566 821 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 AGERQ15109 404 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 AOC3Q16853 763 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 WASHC4Q2M389 1173 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 CCDC184Q52MB2 194 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 EAPPQ56P03 285 aaPredicted RBP7.83□□□□□ -1.16
PTCD3-215ENST00000484203 CIAPIN1Q6FI81 312 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 ANKRD18AQ8IVF6 992 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 TSPYL6Q8N831 410 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 JMYQ8N9B5 988 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 LINS1Q8NG48 757 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 ZNF428Q96B54 188 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 ZC3H12CQ9C0D7 883 aaKnown RBP7.83□□□□□ -1.16
PTCD3-215ENST00000484203 ADARB2Q9NS39 739 aaKnown RBP7.83□□□□□ -1.16
PTCD3-215ENST00000484203 PODXL2Q9NZ53 605 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms