RNA–Protein interactions for RNA: ENST00000483962.1

SNED1-210, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 2

Gene SNED1, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-210ENST00000483962 SALL3Q9BXA9 1300 aa23.78■■□□□ 1.4
SNED1-210ENST00000483962 POLR2AP24928 1970 aaKnown RBP23.78■■□□□ 1.4
SNED1-210ENST00000483962 NBPF9Q3BBW0 867 aa23.77■■□□□ 1.4
SNED1-210ENST00000483962 CFAP100Q494V2 611 aa23.77■■□□□ 1.4
SNED1-210ENST00000483962 TSHZ3Q63HK5 1081 aa23.77■■□□□ 1.4
SNED1-210ENST00000483962 CHD1LQ86WJ1 897 aa23.77■■□□□ 1.4
SNED1-210ENST00000483962 MTMR14Q8NCE2 650 aa23.77■■□□□ 1.4
SNED1-210ENST00000483962 RBM46Q8TBY0 533 aaKnown RBP23.77■■□□□ 1.4
SNED1-210ENST00000483962 ECHDC1Q9NTX5 307 aa23.77■■□□□ 1.4
SNED1-210ENST00000483962 ASTN2O75129 1339 aaPredicted RBP23.77■■□□□ 1.4
SNED1-210ENST00000483962 WNT10BO00744 389 aa23.76■■□□□ 1.39
SNED1-210ENST00000483962 CRKP46108 304 aa23.76■■□□□ 1.39
SNED1-210ENST00000483962 SPTY2D1Q68D10 685 aaPredicted RBP23.76■■□□□ 1.39
SNED1-210ENST00000483962 BOLA2Q9H3K6 86 aa23.76■■□□□ 1.39
SNED1-210ENST00000483962 PIH1D3Q9NQM4 214 aaKnown RBP23.76■■□□□ 1.39
SNED1-210ENST00000483962 PGAP2Q9UHJ9 254 aa23.76■■□□□ 1.39
SNED1-210ENST00000483962 SERPINA10Q9UK55 444 aa23.76■■□□□ 1.39
SNED1-210ENST00000483962 MYH2Q9UKX2 1941 aa23.76■■□□□ 1.39
SNED1-210ENST00000483962 HDLBPQ00341 1268 aaKnown RBP23.75■■□□□ 1.39
SNED1-210ENST00000483962 DLGAP5Q15398 846 aa23.75■■□□□ 1.39
SNED1-210ENST00000483962 ERICH6Q7L0X2 663 aa23.75■■□□□ 1.39
SNED1-210ENST00000483962 ZNF384Q8TF68 577 aa23.75■■□□□ 1.39
SNED1-210ENST00000483962 MRIQ9BWK5 157 aa23.75■■□□□ 1.39
SNED1-210ENST00000483962 ANTXR1Q9H6X2 564 aa23.75■■□□□ 1.39
SNED1-210ENST00000483962 MAST3O60307 1309 aa23.75■■□□□ 1.39
SNED1-210ENST00000483962 AOX1Q06278 1338 aa23.75■■□□□ 1.39
SNED1-210ENST00000483962 ECM29Q5VYK3 1845 aa23.75■■□□□ 1.39
SNED1-210ENST00000483962 DOCK2Q92608 1830 aa23.75■■□□□ 1.39
SNED1-210ENST00000483962 DIXDC1Q155Q3 683 aa23.74■■□□□ 1.39
SNED1-210ENST00000483962 CHADLQ6NUI6 762 aa23.74■■□□□ 1.39
SNED1-210ENST00000483962 ZC3H15Q8WU90 426 aaKnown RBP23.74■■□□□ 1.39
SNED1-210ENST00000483962 GPATCH3Q96I76 525 aa23.74■■□□□ 1.39
SNED1-210ENST00000483962 PRMT6Q96LA8 375 aaPredicted RBP23.74■■□□□ 1.39
SNED1-210ENST00000483962 SPDYE2BA6NHP3 402 aa23.73■■□□□ 1.39
SNED1-210ENST00000483962 SPDYE6P0CI01 402 aa23.73■■□□□ 1.39
SNED1-210ENST00000483962 MX1P20591 662 aa23.73■■□□□ 1.39
SNED1-210ENST00000483962 RBM5P52756 815 aaKnown RBP eCLIP23.73■■□□□ 1.39
SNED1-210ENST00000483962 MECOMQ03112 1051 aa23.73■■□□□ 1.39
SNED1-210ENST00000483962 MAP1SQ66K74 1059 aaPredicted RBP23.73■■□□□ 1.39
SNED1-210ENST00000483962 TEKT1Q969V4 418 aa23.73■■□□□ 1.39
SNED1-210ENST00000483962 EDC3Q96F86 508 aaKnown RBP23.73■■□□□ 1.39
SNED1-210ENST00000483962 DNAJC2Q99543 621 aaKnown RBP23.73■■□□□ 1.39
SNED1-210ENST00000483962 HAUS7Q99871 368 aa23.73■■□□□ 1.39
SNED1-210ENST00000483962 LRP2BPQ9P2M1 347 aa23.73■■□□□ 1.39
SNED1-210ENST00000483962 HHIPL2Q6UWX4 724 aa23.72■■□□□ 1.39
SNED1-210ENST00000483962 DZIP1Q86YF9 867 aaKnown RBP23.72■■□□□ 1.39
SNED1-210ENST00000483962 SMC1BQ8NDV3 1235 aa23.72■■□□□ 1.39
SNED1-210ENST00000483962 PI4K2BQ8TCG2 481 aa23.72■■□□□ 1.39
SNED1-210ENST00000483962 GGA3Q9NZ52 723 aa23.72■■□□□ 1.39
SNED1-210ENST00000483962 TTC41PQ6P2S7 1318 aa23.72■■□□□ 1.39
SNED1-210ENST00000483962 MAST2Q6P0Q8 1798 aa23.71■■□□□ 1.39
SNED1-210ENST00000483962 GOLIM4O00461 696 aa23.71■■□□□ 1.39
SNED1-210ENST00000483962 NSUN4Q96CB9 384 aaKnown RBP23.71■■□□□ 1.39
SNED1-210ENST00000483962 ZDHHC15Q96MV8 337 aa23.71■■□□□ 1.39
SNED1-210ENST00000483962 RAI14Q9P0K7 980 aa23.71■■□□□ 1.39
SNED1-210ENST00000483962 STAP2Q9UGK3 403 aa23.71■■□□□ 1.39
SNED1-210ENST00000483962 PDE1AP54750 535 aa23.7■■□□□ 1.38
SNED1-210ENST00000483962 ANGEL2Q5VTE6 544 aaKnown RBP23.7■■□□□ 1.38
SNED1-210ENST00000483962 CNTROBQ8N137 903 aa23.7■■□□□ 1.38
SNED1-210ENST00000483962 PAG1Q9NWQ8 432 aa23.7■■□□□ 1.38
SNED1-210ENST00000483962 DAGLAQ9Y4D2 1042 aa23.7■■□□□ 1.38
SNED1-210ENST00000483962 FSTL1Q12841 308 aa23.69■■□□□ 1.38
SNED1-210ENST00000483962 ERICH6BQ5W0A0 696 aa23.69■■□□□ 1.38
SNED1-210ENST00000483962 APOBEC3HQ6NTF7 200 aaKnown RBP23.69■■□□□ 1.38
SNED1-210ENST00000483962 CCDC136Q96JN2 1154 aa23.69■■□□□ 1.38
SNED1-210ENST00000483962 GAKO14976 1311 aa23.68■■□□□ 1.38
SNED1-210ENST00000483962 IDH1O75874 414 aaKnown RBP23.68■■□□□ 1.38
SNED1-210ENST00000483962 ITGBL1O95965 494 aaPredicted RBP23.68■■□□□ 1.38
SNED1-210ENST00000483962 PDE4AP27815 886 aa23.68■■□□□ 1.38
SNED1-210ENST00000483962 TTF1Q15361 905 aaPredicted RBP23.68■■□□□ 1.38
SNED1-210ENST00000483962 CENPQQ7L2Z9 268 aaPredicted RBP23.68■■□□□ 1.38
SNED1-210ENST00000483962 PLEKHM2Q8IWE5 1019 aa23.68■■□□□ 1.38
SNED1-210ENST00000483962 FAM163AQ96GL9 167 aaPredicted RBP23.68■■□□□ 1.38
SNED1-210ENST00000483962 GLIS2Q9BZE0 524 aaPredicted RBP23.68■■□□□ 1.38
SNED1-210ENST00000483962 TDRD3Q9H7E2 651 aaKnown RBP23.68■■□□□ 1.38
SNED1-210ENST00000483962 SCAF8Q9UPN6 1271 aaKnown RBP23.68■■□□□ 1.38
SNED1-210ENST00000483962 MROH7-TTC4A0A0A0MT08 1334 aa23.67■■□□□ 1.38
SNED1-210ENST00000483962 PITPNM2Q9BZ72 1349 aa23.67■■□□□ 1.38
SNED1-210ENST00000483962 CLRN2A0PK11 232 aa23.67■■□□□ 1.38
SNED1-210ENST00000483962 ERC2O15083 957 aa23.67■■□□□ 1.38
SNED1-210ENST00000483962 GLRX3O76003 335 aaKnown RBP23.67■■□□□ 1.38
SNED1-210ENST00000483962 DCPSQ96C86 337 aaKnown RBP23.67■■□□□ 1.38
SNED1-210ENST00000483962 GSTO1P78417 241 aa23.66■■□□□ 1.38
SNED1-210ENST00000483962 SPDYE2Q495Y8 402 aa23.66■■□□□ 1.38
SNED1-210ENST00000483962 NAA16Q6N069 864 aaPredicted RBP23.66■■□□□ 1.38
SNED1-210ENST00000483962 DLK2Q6UY11 383 aa23.66■■□□□ 1.38
SNED1-210ENST00000483962 USP48Q86UV5 1035 aa23.66■■□□□ 1.38
SNED1-210ENST00000483962 SLF2Q8IX21 1173 aa23.66■■□□□ 1.38
SNED1-210ENST00000483962 ZNF70Q9UC06 446 aaPredicted RBP23.66■■□□□ 1.38
SNED1-210ENST00000483962 MYH7P12883 1935 aa23.66■■□□□ 1.38
SNED1-210ENST00000483962 ADM5C9JUS6 153 aa23.65■■□□□ 1.38
SNED1-210ENST00000483962 TRAF5O00463 557 aa23.65■■□□□ 1.38
SNED1-210ENST00000483962 MYO1BO43795 1136 aa23.65■■□□□ 1.38
SNED1-210ENST00000483962 MAP4K4O95819 1239 aaPredicted RBP23.65■■□□□ 1.38
SNED1-210ENST00000483962 LDHCP07864 332 aa23.65■■□□□ 1.38
SNED1-210ENST00000483962 FMR1Q06787 632 aaKnown RBP eCLIP23.65■■□□□ 1.38
SNED1-210ENST00000483962 MAP3K12Q12852 859 aa23.65■■□□□ 1.38
SNED1-210ENST00000483962 CDC37L1Q7L3B6 337 aa23.65■■□□□ 1.38
SNED1-210ENST00000483962 KRT26Q7Z3Y9 468 aa23.65■■□□□ 1.38
SNED1-210ENST00000483962 IGSF3O75054 1194 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms