RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 PODXL2Q9NZ53 605 aa14.98□□□□□ -0.01
TSPAN1-208ENST00000482928 LRP2BPQ9P2M1 347 aa14.98□□□□□ -0.01
TSPAN1-208ENST00000482928 IQSEC3Q9UPP2 1182 aaPredicted RBP14.98□□□□□ -0.01
TSPAN1-208ENST00000482928 RBM25P49756 843 aaKnown RBP14.97□□□□□ -0.01
TSPAN1-208ENST00000482928 MNX1P50219 401 aaPredicted RBP14.97□□□□□ -0.01
TSPAN1-208ENST00000482928 CHAF1AQ13111 956 aaPredicted RBP14.97□□□□□ -0.01
TSPAN1-208ENST00000482928 FBXO33Q7Z6M2 555 aa14.97□□□□□ -0.01
TSPAN1-208ENST00000482928 LRRC37AA6NMS7 1700 aa14.97□□□□□ -0.01
TSPAN1-208ENST00000482928 CACNA1SQ13698 1873 aa14.97□□□□□ -0.01
TSPAN1-208ENST00000482928 A0A0D9SFI3 127 aa14.96□□□□□ -0.01
TSPAN1-208ENST00000482928 ITGBL1O95965 494 aaPredicted RBP14.96□□□□□ -0.01
TSPAN1-208ENST00000482928 CYP2E1P05181 493 aaPredicted RBP14.96□□□□□ -0.01
TSPAN1-208ENST00000482928 KLRK1P26718 216 aa14.96□□□□□ -0.01
TSPAN1-208ENST00000482928 BECN1Q14457 450 aa14.96□□□□□ -0.01
TSPAN1-208ENST00000482928 SLC9C2Q5TAH2 1124 aa14.96□□□□□ -0.01
TSPAN1-208ENST00000482928 CC2D2BQ6DHV5 1058 aa14.96□□□□□ -0.01
TSPAN1-208ENST00000482928 ZGPATQ8N5A5 531 aaKnown RBP14.96□□□□□ -0.01
TSPAN1-208ENST00000482928 TBC1D16Q8TBP0 767 aa14.96□□□□□ -0.01
TSPAN1-208ENST00000482928 RAI14Q9P0K7 980 aa14.96□□□□□ -0.01
TSPAN1-208ENST00000482928 ABCF2Q9UG63 623 aa14.96□□□□□ -0.01
TSPAN1-208ENST00000482928 SCN4AP35499 1836 aa14.96□□□□□ -0.01
TSPAN1-208ENST00000482928 MED23Q9ULK4 1368 aa14.96□□□□□ -0.02
TSPAN1-208ENST00000482928 ZMYM1Q5SVZ6 1142 aa14.95□□□□□ -0.02
TSPAN1-208ENST00000482928 C15orf52Q6ZUT6 534 aaKnown RBP14.95□□□□□ -0.02
TSPAN1-208ENST00000482928 TTLL6Q8N841 843 aa14.95□□□□□ -0.02
TSPAN1-208ENST00000482928 APPBP2Q92624 585 aa14.95□□□□□ -0.02
TSPAN1-208ENST00000482928 ZC3H12CQ9C0D7 883 aaKnown RBP14.95□□□□□ -0.02
TSPAN1-208ENST00000482928 PIH1D3Q9NQM4 214 aaKnown RBP14.95□□□□□ -0.02
TSPAN1-208ENST00000482928 PDS5AQ29RF7 1337 aaKnown RBP14.94□□□□□ -0.02
TSPAN1-208ENST00000482928 CCDC171Q6TFL3 1326 aa14.94□□□□□ -0.02
TSPAN1-208ENST00000482928 MYH13Q9UKX3 1938 aa14.94□□□□□ -0.02
TSPAN1-208ENST00000482928 WTIPA6NIX2 430 aaPredicted RBP14.94□□□□□ -0.02
TSPAN1-208ENST00000482928 GRIPAP1Q4V328 841 aa14.94□□□□□ -0.02
TSPAN1-208ENST00000482928 RNF20Q5VTR2 975 aa14.94□□□□□ -0.02
TSPAN1-208ENST00000482928 SPTY2D1Q68D10 685 aaPredicted RBP14.94□□□□□ -0.02
TSPAN1-208ENST00000482928 CYP4F22Q6NT55 531 aa14.94□□□□□ -0.02
TSPAN1-208ENST00000482928 SUPT20HQ8NEM7 779 aa14.94□□□□□ -0.02
TSPAN1-208ENST00000482928 AKAP11Q9UKA4 1901 aa14.94□□□□□ -0.02
TSPAN1-208ENST00000482928 RIMBP2O15034 1052 aa14.93□□□□□ -0.02
TSPAN1-208ENST00000482928 PDE6AP16499 860 aa14.93□□□□□ -0.02
TSPAN1-208ENST00000482928 ADD2P35612 726 aa14.93□□□□□ -0.02
TSPAN1-208ENST00000482928 ERICH6Q7L0X2 663 aa14.93□□□□□ -0.02
TSPAN1-208ENST00000482928 MAGEB6Q8N7X4 407 aa14.93□□□□□ -0.02
TSPAN1-208ENST00000482928 WDR66Q8TBY9 1149 aa14.93□□□□□ -0.02
TSPAN1-208ENST00000482928 LSG1Q9H089 658 aaKnown RBP14.93□□□□□ -0.02
TSPAN1-208ENST00000482928 POLLQ9UGP5 575 aa14.93□□□□□ -0.02
TSPAN1-208ENST00000482928 MYH7P12883 1935 aa14.93□□□□□ -0.02
TSPAN1-208ENST00000482928 SZT2Q5T011 3432 aa14.93□□□□□ -0.02
TSPAN1-208ENST00000482928 ZKSCAN1P17029 563 aaPredicted RBP14.92□□□□□ -0.02
TSPAN1-208ENST00000482928 UBE3CQ15386 1083 aa14.92□□□□□ -0.02
TSPAN1-208ENST00000482928 SOGA3Q5TF21 947 aa14.92□□□□□ -0.02
TSPAN1-208ENST00000482928 FBXW7Q969H0 707 aa14.92□□□□□ -0.02
TSPAN1-208ENST00000482928 IPO9Q96P70 1041 aaKnown RBP14.92□□□□□ -0.02
TSPAN1-208ENST00000482928 COA1Q9GZY4 146 aa14.92□□□□□ -0.02
TSPAN1-208ENST00000482928 U3KPZ7 1027 aaPredicted RBP14.92□□□□□ -0.02
TSPAN1-208ENST00000482928 DLEC1Q9Y238 1755 aa14.92□□□□□ -0.02
TSPAN1-208ENST00000482928 MAST3O60307 1309 aa14.92□□□□□ -0.02
TSPAN1-208ENST00000482928 ZNF532Q9HCE3 1301 aa14.92□□□□□ -0.02
TSPAN1-208ENST00000482928 DUOX1Q9NRD9 1551 aa14.91□□□□□ -0.02
TSPAN1-208ENST00000482928 ANAPC15P60006 121 aa14.91□□□□□ -0.02
TSPAN1-208ENST00000482928 RABEP1Q15276 862 aa14.91□□□□□ -0.02
TSPAN1-208ENST00000482928 CCDC93Q567U6 631 aa14.91□□□□□ -0.02
TSPAN1-208ENST00000482928 CCDC129Q6ZRS4 1044 aa14.91□□□□□ -0.02
TSPAN1-208ENST00000482928 TXNRD3Q86VQ6 643 aa14.91□□□□□ -0.02
TSPAN1-208ENST00000482928 DZIP1Q86YF9 867 aaKnown RBP14.91□□□□□ -0.02
TSPAN1-208ENST00000482928 HSCBQ8IWL3 235 aa14.91□□□□□ -0.02
TSPAN1-208ENST00000482928 TDRD7Q8NHU6 1098 aaKnown RBP14.91□□□□□ -0.02
TSPAN1-208ENST00000482928 SEC62Q99442 399 aaKnown RBP14.91□□□□□ -0.02
TSPAN1-208ENST00000482928 IL25Q9H293 177 aa14.91□□□□□ -0.02
TSPAN1-208ENST00000482928 CD209Q9NNX6 404 aa14.91□□□□□ -0.02
TSPAN1-208ENST00000482928 M0R2C6 588 aa14.9□□□□□ -0.02
TSPAN1-208ENST00000482928 C21orf2O43822 256 aa14.9□□□□□ -0.02
TSPAN1-208ENST00000482928 AOC2O75106 756 aa14.9□□□□□ -0.02
TSPAN1-208ENST00000482928 CYP7A1P22680 504 aa14.9□□□□□ -0.02
TSPAN1-208ENST00000482928 NAA16Q6N069 864 aaPredicted RBP14.9□□□□□ -0.02
TSPAN1-208ENST00000482928 OLFM4Q6UX06 510 aa14.9□□□□□ -0.02
TSPAN1-208ENST00000482928 ZNF589Q86UQ0 364 aaPredicted RBP14.9□□□□□ -0.02
TSPAN1-208ENST00000482928 SLC51AQ86UW1 340 aa14.9□□□□□ -0.02
TSPAN1-208ENST00000482928 RTKN2Q8IZC4 609 aa14.9□□□□□ -0.02
TSPAN1-208ENST00000482928 NOL10Q9BSC4 688 aaKnown RBP14.9□□□□□ -0.02
TSPAN1-208ENST00000482928 RBM8AQ9Y5S9 174 aaKnown RBP14.9□□□□□ -0.02
TSPAN1-208ENST00000482928 ADAMTSL1Q8N6G6 1762 aa14.9□□□□□ -0.02
TSPAN1-208ENST00000482928 IRS2Q9Y4H2 1338 aa14.9□□□□□ -0.02
TSPAN1-208ENST00000482928 SLX4Q8IY92 1834 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 DOCK2Q92608 1830 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 IQCA1LA6NCM1 817 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 ZBTB22O15209 634 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 ST18O60284 1047 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 IGSF3O75054 1194 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 APPP05067 770 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 LDHBP07195 334 aaKnown RBP14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 HSPA4P34932 840 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 MAP2K2P36507 400 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 GSTO1P78417 241 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 PTH1RQ03431 593 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 EAPPQ56P03 285 aaPredicted RBP14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 TMED8Q6PL24 325 aaPredicted RBP14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 TBC1D22AQ8WUA7 517 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 OSBP2Q969R2 916 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 CTNNA3Q9UI47 895 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms