RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 CRKP46108 304 aa20.34■□□□□ 0.85
HMGN1-214ENST00000482733 GRIK5Q16478 980 aa20.34■□□□□ 0.85
HMGN1-214ENST00000482733 SPTY2D1Q68D10 685 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-214ENST00000482733 SPATA5Q8NB90 893 aa20.34■□□□□ 0.85
HMGN1-214ENST00000482733 TEKT1Q969V4 418 aa20.34■□□□□ 0.85
HMGN1-214ENST00000482733 HMG20BQ9P0W2 317 aa20.34■□□□□ 0.85
HMGN1-214ENST00000482733 TRAF5O00463 557 aa20.33■□□□□ 0.85
HMGN1-214ENST00000482733 APOBEC3FQ8IUX4 373 aaKnown RBP20.33■□□□□ 0.85
HMGN1-214ENST00000482733 LRRCC1Q9C099 1032 aa20.33■□□□□ 0.85
HMGN1-214ENST00000482733 IFIT2P09913 472 aaKnown RBP20.32■□□□□ 0.84
HMGN1-214ENST00000482733 HHIPL2Q6UWX4 724 aa20.32■□□□□ 0.84
HMGN1-214ENST00000482733 PRMT6Q96LA8 375 aaPredicted RBP20.32■□□□□ 0.84
HMGN1-214ENST00000482733 TLR7Q9NYK1 1049 aaKnown RBP20.32■□□□□ 0.84
HMGN1-214ENST00000482733 ADM5C9JUS6 153 aa20.31■□□□□ 0.84
HMGN1-214ENST00000482733 PRDX5P30044 214 aa20.31■□□□□ 0.84
HMGN1-214ENST00000482733 MCAMP43121 646 aa20.31■□□□□ 0.84
HMGN1-214ENST00000482733 ZDHHC15Q96MV8 337 aa20.31■□□□□ 0.84
HMGN1-214ENST00000482733 ABCF2Q9UG63 623 aa20.31■□□□□ 0.84
HMGN1-214ENST00000482733 IGSF3O75054 1194 aa20.3■□□□□ 0.84
HMGN1-214ENST00000482733 CELF2O95319 508 aaKnown RBP20.3■□□□□ 0.84
HMGN1-214ENST00000482733 ERICH6Q7L0X2 663 aa20.3■□□□□ 0.84
HMGN1-214ENST00000482733 SLF2Q8IX21 1173 aa20.3■□□□□ 0.84
HMGN1-214ENST00000482733 PCDHAC2Q9Y5I4 1007 aa20.3■□□□□ 0.84
HMGN1-214ENST00000482733 HDAC1Q13547 482 aaPredicted RBP20.29■□□□□ 0.84
HMGN1-214ENST00000482733 DZIP1Q86YF9 867 aaKnown RBP20.29■□□□□ 0.84
HMGN1-214ENST00000482733 EXOC6Q8TAG9 804 aa20.29■□□□□ 0.84
HMGN1-214ENST00000482733 FMR1Q06787 632 aaKnown RBP eCLIP20.28■□□□□ 0.84
HMGN1-214ENST00000482733 SPDYE2Q495Y8 402 aa20.28■□□□□ 0.84
HMGN1-214ENST00000482733 CST9Q5W186 159 aa20.28■□□□□ 0.84
HMGN1-214ENST00000482733 PI16Q6UXB8 463 aa20.28■□□□□ 0.84
HMGN1-214ENST00000482733 PPP2R3BQ9Y5P8 575 aa20.28■□□□□ 0.84
HMGN1-214ENST00000482733 CLRN2A0PK11 232 aa20.27■□□□□ 0.84
HMGN1-214ENST00000482733 TNFAIP1Q13829 316 aa20.27■□□□□ 0.84
HMGN1-214ENST00000482733 APOBEC3HQ6NTF7 200 aaKnown RBP20.27■□□□□ 0.84
HMGN1-214ENST00000482733 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.27■□□□□ 0.84
HMGN1-214ENST00000482733 CDCA5Q96FF9 252 aa20.27■□□□□ 0.84
HMGN1-214ENST00000482733 TDRD3Q9H7E2 651 aaKnown RBP20.27■□□□□ 0.84
HMGN1-214ENST00000482733 ZNF408Q9H9D4 720 aa20.27■□□□□ 0.84
HMGN1-214ENST00000482733 VEZTQ9HBM0 779 aa20.27■□□□□ 0.84
HMGN1-214ENST00000482733 ZNF70Q9UC06 446 aaPredicted RBP20.27■□□□□ 0.84
HMGN1-214ENST00000482733 MYH13Q9UKX3 1938 aa20.26■□□□□ 0.83
HMGN1-214ENST00000482733 GSTO1P78417 241 aa20.26■□□□□ 0.83
HMGN1-214ENST00000482733 HTRA3P83110 453 aa20.26■□□□□ 0.83
HMGN1-214ENST00000482733 GCC1Q96CN9 775 aa20.26■□□□□ 0.83
HMGN1-214ENST00000482733 FAM163AQ96GL9 167 aaPredicted RBP20.26■□□□□ 0.83
HMGN1-214ENST00000482733 DEFB129Q9H1M3 183 aa20.26■□□□□ 0.83
HMGN1-214ENST00000482733 SNRKQ9NRH2 765 aa20.26■□□□□ 0.83
HMGN1-214ENST00000482733 TMOD2Q9NZR1 351 aa20.26■□□□□ 0.83
HMGN1-214ENST00000482733 LRP2BPQ9P2M1 347 aa20.26■□□□□ 0.83
HMGN1-214ENST00000482733 LDHCP07864 332 aa20.25■□□□□ 0.83
HMGN1-214ENST00000482733 ZAP70P43403 619 aa20.25■□□□□ 0.83
HMGN1-214ENST00000482733 TNNI2P48788 182 aa20.25■□□□□ 0.83
HMGN1-214ENST00000482733 DIXDC1Q155Q3 683 aa20.25■□□□□ 0.83
HMGN1-214ENST00000482733 TBC1D9Q6ZT07 1266 aa20.25■□□□□ 0.83
HMGN1-214ENST00000482733 C2orf69Q8N8R5 385 aa20.25■□□□□ 0.83
HMGN1-214ENST00000482733 BCL11AQ9H165 835 aa20.25■□□□□ 0.83
HMGN1-214ENST00000482733 RWDD1Q9H446 243 aaPredicted RBP20.25■□□□□ 0.83
HMGN1-214ENST00000482733 RAI14Q9P0K7 980 aa20.25■□□□□ 0.83
HMGN1-214ENST00000482733 ABT1Q9ULW3 272 aaKnown RBP20.25■□□□□ 0.83
HMGN1-214ENST00000482733 DAGLAQ9Y4D2 1042 aa20.25■□□□□ 0.83
HMGN1-214ENST00000482733 SMARCA5O60264 1052 aaPredicted RBP20.24■□□□□ 0.83
HMGN1-214ENST00000482733 CYP2E1P05181 493 aaPredicted RBP20.24■□□□□ 0.83
HMGN1-214ENST00000482733 NF2P35240 595 aa20.24■□□□□ 0.83
HMGN1-214ENST00000482733 MECOMQ03112 1051 aa20.24■□□□□ 0.83
HMGN1-214ENST00000482733 FKBP1CQ5VVH2 108 aa20.24■□□□□ 0.83
HMGN1-214ENST00000482733 DLK2Q6UY11 383 aa20.24■□□□□ 0.83
HMGN1-214ENST00000482733 DNAJC5GQ8N7S2 189 aa20.24■□□□□ 0.83
HMGN1-214ENST00000482733 GBA2Q9HCG7 927 aaPredicted RBP20.24■□□□□ 0.83
HMGN1-214ENST00000482733 ZBTB47Q9UFB7 747 aaPredicted RBP20.24■□□□□ 0.83
HMGN1-214ENST00000482733 SCAF8Q9UPN6 1271 aaKnown RBP20.24■□□□□ 0.83
HMGN1-214ENST00000482733 TLL2Q9Y6L7 1015 aa20.24■□□□□ 0.83
HMGN1-214ENST00000482733 GAKO14976 1311 aa20.24■□□□□ 0.83
HMGN1-214ENST00000482733 AOX1Q06278 1338 aa20.24■□□□□ 0.83
HMGN1-214ENST00000482733 RASSF10A6NK89 507 aa20.23■□□□□ 0.83
HMGN1-214ENST00000482733 FKBP1BP68106 108 aa20.23■□□□□ 0.83
HMGN1-214ENST00000482733 NSUN4Q96CB9 384 aaKnown RBP20.23■□□□□ 0.83
HMGN1-214ENST00000482733 KLRG1Q96E93 195 aa20.23■□□□□ 0.83
HMGN1-214ENST00000482733 ATP5JP18859 108 aa20.22■□□□□ 0.83
HMGN1-214ENST00000482733 RASA3Q14644 834 aa20.22■□□□□ 0.83
HMGN1-214ENST00000482733 TTF1Q15361 905 aaPredicted RBP20.22■□□□□ 0.83
HMGN1-214ENST00000482733 DEFB115Q30KQ5 88 aa20.22■□□□□ 0.83
HMGN1-214ENST00000482733 TMED8Q6PL24 325 aaPredicted RBP20.22■□□□□ 0.83
HMGN1-214ENST00000482733 SAPCD2Q86UD0 394 aa20.22■□□□□ 0.83
HMGN1-214ENST00000482733 GPATCH3Q96I76 525 aa20.22■□□□□ 0.83
HMGN1-214ENST00000482733 HHIPL1Q96JK4 782 aa20.22■□□□□ 0.83
HMGN1-214ENST00000482733 MROH7-TTC4A0A0A0MT08 1334 aa20.22■□□□□ 0.83
HMGN1-214ENST00000482733 CEP350Q5VT06 3117 aa20.22■□□□□ 0.83
HMGN1-214ENST00000482733 SUPT20HL1Q3ZLR7 823 aa20.21■□□□□ 0.83
HMGN1-214ENST00000482733 CDC42EP5Q6NZY7 148 aa20.21■□□□□ 0.83
HMGN1-214ENST00000482733 FAM83AQ86UY5 434 aa20.21■□□□□ 0.83
HMGN1-214ENST00000482733 ECHDC1Q9NTX5 307 aa20.21■□□□□ 0.83
HMGN1-214ENST00000482733 CNTNAP1P78357 1384 aa20.21■□□□□ 0.83
HMGN1-214ENST00000482733 GPR75-ASB3A0A0A6YYF3 556 aa20.2■□□□□ 0.82
HMGN1-214ENST00000482733 TCP10L2B9ZVM9 353 aa20.2■□□□□ 0.82
HMGN1-214ENST00000482733 MAP4K4O95819 1239 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-214ENST00000482733 IRX6P78412 446 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-214ENST00000482733 PRAMEF18Q5VWM3 479 aa20.2■□□□□ 0.82
HMGN1-214ENST00000482733 NAA16Q6N069 864 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-214ENST00000482733 PIH1D3Q9NQM4 214 aaKnown RBP20.2■□□□□ 0.82
HMGN1-214ENST00000482733 USP40Q9NVE5 1235 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms