RNA–Protein interactions for RNA: ENST00000482657.1

LCNL1-204, Transcript of lipocalin like 1, humanhuman

TSL 2

Gene LCNL1, Length 3,706 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-204ENST00000482657 PXDNLA1KZ92 1463 aa17.72■□□□□ 0.43
LCNL1-204ENST00000482657 IARSP41252 1262 aaKnown RBP17.72■□□□□ 0.43
LCNL1-204ENST00000482657 SYKP43405 635 aa17.72■□□□□ 0.43
LCNL1-204ENST00000482657 BICDL1Q6ZP65 573 aa17.72■□□□□ 0.43
LCNL1-204ENST00000482657 MIGA1Q8NAN2 632 aa17.72■□□□□ 0.43
LCNL1-204ENST00000482657 CMTR1Q8N1G2 835 aaKnown RBP17.71■□□□□ 0.43
LCNL1-204ENST00000482657 CCDC191Q8NCU4 936 aa17.71■□□□□ 0.43
LCNL1-204ENST00000482657 PUS7LQ9H0K6 701 aaKnown RBP17.71■□□□□ 0.43
LCNL1-204ENST00000482657 ASAP1Q9ULH1 1129 aa17.71■□□□□ 0.43
LCNL1-204ENST00000482657 IL2RBP14784 551 aa17.71■□□□□ 0.43
LCNL1-204ENST00000482657 ITGA6P23229 1130 aa17.71■□□□□ 0.43
LCNL1-204ENST00000482657 ZMYM1Q5SVZ6 1142 aa17.71■□□□□ 0.43
LCNL1-204ENST00000482657 INCENPQ9NQS7 918 aa17.71■□□□□ 0.43
LCNL1-204ENST00000482657 SCARF1Q14162 830 aa17.71■□□□□ 0.43
LCNL1-204ENST00000482657 SLC12A7Q9Y666 1083 aa17.7■□□□□ 0.42
LCNL1-204ENST00000482657 ZNF202O95125 648 aa17.7■□□□□ 0.42
LCNL1-204ENST00000482657 IQCB1Q15051 598 aa17.7■□□□□ 0.42
LCNL1-204ENST00000482657 JMYQ8N9B5 988 aa17.7■□□□□ 0.42
LCNL1-204ENST00000482657 CNNM3Q8NE01 707 aa17.7■□□□□ 0.42
LCNL1-204ENST00000482657 DSCC1Q9BVC3 393 aa17.7■□□□□ 0.42
LCNL1-204ENST00000482657 CALCOCO1Q9P1Z2 691 aa17.7■□□□□ 0.42
LCNL1-204ENST00000482657 CCP110O43303 1012 aa17.7■□□□□ 0.42
LCNL1-204ENST00000482657 FANCCQ00597 558 aa17.7■□□□□ 0.42
LCNL1-204ENST00000482657 KARSQ15046 597 aaKnown RBP17.7■□□□□ 0.42
LCNL1-204ENST00000482657 KIAA1468Q9P260 1216 aa17.7■□□□□ 0.42
LCNL1-204ENST00000482657 RFX5P48382 616 aaPredicted RBP17.69■□□□□ 0.42
LCNL1-204ENST00000482657 NAA16Q6N069 864 aaPredicted RBP17.69■□□□□ 0.42
LCNL1-204ENST00000482657 KCNG4Q8TDN1 519 aa17.69■□□□□ 0.42
LCNL1-204ENST00000482657 LLPHQ9BRT6 129 aaKnown RBP17.69■□□□□ 0.42
LCNL1-204ENST00000482657 ZBTB43O43298 467 aa17.69■□□□□ 0.42
LCNL1-204ENST00000482657 CBFA2T2O43439 604 aa17.69■□□□□ 0.42
LCNL1-204ENST00000482657 RAI14Q9P0K7 980 aa17.69■□□□□ 0.42
LCNL1-204ENST00000482657 RCOR1Q9UKL0 485 aa17.69■□□□□ 0.42
LCNL1-204ENST00000482657 IRS4O14654 1257 aaPredicted RBP17.69■□□□□ 0.42
LCNL1-204ENST00000482657 CASQ1P31415 396 aa17.69■□□□□ 0.42
LCNL1-204ENST00000482657 AKAP12Q02952 1782 aa17.69■□□□□ 0.42
LCNL1-204ENST00000482657 MED23Q9ULK4 1368 aa17.68■□□□□ 0.42
LCNL1-204ENST00000482657 SART3Q15020 963 aaKnown RBP17.68■□□□□ 0.42
LCNL1-204ENST00000482657 TRIM22Q8IYM9 498 aa17.68■□□□□ 0.42
LCNL1-204ENST00000482657 ATP1A3P13637 1013 aa17.68■□□□□ 0.42
LCNL1-204ENST00000482657 CTDSPL2Q05D32 466 aa17.68■□□□□ 0.42
LCNL1-204ENST00000482657 TERF2Q15554 542 aa17.68■□□□□ 0.42
LCNL1-204ENST00000482657 ATG9AQ7Z3C6 839 aa17.68■□□□□ 0.42
LCNL1-204ENST00000482657 APPBP2Q92624 585 aa17.68■□□□□ 0.42
LCNL1-204ENST00000482657 PPP1R13BQ96KQ4 1090 aa17.68■□□□□ 0.42
LCNL1-204ENST00000482657 hCG_1642624A0A1W2PR95 340 aa17.68■□□□□ 0.42
LCNL1-204ENST00000482657 GREM2Q9H772 168 aa17.68■□□□□ 0.42
LCNL1-204ENST00000482657 TMEM94Q12767 1356 aa17.68■□□□□ 0.42
LCNL1-204ENST00000482657 CDKL5O76039 1030 aa17.67■□□□□ 0.42
LCNL1-204ENST00000482657 SEC31AO94979 1220 aaKnown RBP17.67■□□□□ 0.42
LCNL1-204ENST00000482657 EVCP57679 992 aa17.67■□□□□ 0.42
LCNL1-204ENST00000482657 FOXO4P98177 505 aa17.67■□□□□ 0.42
LCNL1-204ENST00000482657 MAGEB6Q8N7X4 407 aa17.67■□□□□ 0.42
LCNL1-204ENST00000482657 ACSBG1Q96GR2 724 aa17.67■□□□□ 0.42
LCNL1-204ENST00000482657 EPC1Q9H2F5 836 aa17.67■□□□□ 0.42
LCNL1-204ENST00000482657 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.67■□□□□ 0.42
LCNL1-204ENST00000482657 UBR1Q8IWV7 1749 aa17.67■□□□□ 0.42
LCNL1-204ENST00000482657 ZFYP08048 801 aaPredicted RBP17.67■□□□□ 0.42
LCNL1-204ENST00000482657 CLIC6Q96NY7 704 aa17.67■□□□□ 0.42
LCNL1-204ENST00000482657 H7C1W4 665 aa17.67■□□□□ 0.42
LCNL1-204ENST00000482657 UBAC1Q9BSL1 405 aa17.67■□□□□ 0.42
LCNL1-204ENST00000482657 DENND2AQ9ULE3 1009 aa17.67■□□□□ 0.42
LCNL1-204ENST00000482657 PCDH11XQ9BZA7 1347 aa17.66■□□□□ 0.42
LCNL1-204ENST00000482657 PCDH11YQ9BZA8 1340 aa17.66■□□□□ 0.42
LCNL1-204ENST00000482657 ZSCAN12O43309 604 aa17.66■□□□□ 0.42
LCNL1-204ENST00000482657 TCIRG1Q13488 830 aa17.66■□□□□ 0.42
LCNL1-204ENST00000482657 MYSM1Q5VVJ2 828 aa17.66■□□□□ 0.42
LCNL1-204ENST00000482657 ANO1Q5XXA6 986 aa17.66■□□□□ 0.42
LCNL1-204ENST00000482657 NEK11Q8NG66 645 aa17.66■□□□□ 0.42
LCNL1-204ENST00000482657 CCDC12Q8WUD4 166 aaPredicted RBP17.66■□□□□ 0.42
LCNL1-204ENST00000482657 ADGRL3Q9HAR2 1447 aa17.66■□□□□ 0.42
LCNL1-204ENST00000482657 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
LCNL1-204ENST00000482657 DHX40Q8IX18 779 aaKnown RBP17.66■□□□□ 0.42
LCNL1-204ENST00000482657 HOOK1Q9UJC3 728 aaKnown RBP17.66■□□□□ 0.42
LCNL1-204ENST00000482657 CTDNEP1O95476 244 aa17.65■□□□□ 0.42
LCNL1-204ENST00000482657 CDC25BP30305 580 aa17.65■□□□□ 0.42
LCNL1-204ENST00000482657 LMAN1P49257 510 aa17.65■□□□□ 0.42
LCNL1-204ENST00000482657 MCM6Q14566 821 aa17.65■□□□□ 0.42
LCNL1-204ENST00000482657 ARMT1Q9H993 441 aa17.65■□□□□ 0.42
LCNL1-204ENST00000482657 CCZ1BP86790 482 aa17.65■□□□□ 0.42
LCNL1-204ENST00000482657 CCZ1P86791 482 aaPredicted RBP17.65■□□□□ 0.42
LCNL1-204ENST00000482657 MAP3K12Q12852 859 aa17.65■□□□□ 0.42
LCNL1-204ENST00000482657 KCNJ14Q9UNX9 436 aa17.65■□□□□ 0.42
LCNL1-204ENST00000482657 ZNF532Q9HCE3 1301 aa17.65■□□□□ 0.42
LCNL1-204ENST00000482657 PIK3C2AO00443 1686 aa17.65■□□□□ 0.42
LCNL1-204ENST00000482657 RANBP6O60518 1105 aaKnown RBP17.65■□□□□ 0.42
LCNL1-204ENST00000482657 MBD4O95243 580 aa17.65■□□□□ 0.42
LCNL1-204ENST00000482657 ADALQ6DHV7 355 aa17.65■□□□□ 0.42
LCNL1-204ENST00000482657 NACAP1Q9BZK3 213 aa17.65■□□□□ 0.42
LCNL1-204ENST00000482657 TULP1O00294 542 aaPredicted RBP17.64■□□□□ 0.42
LCNL1-204ENST00000482657 PHKA1P46020 1223 aa17.64■□□□□ 0.42
LCNL1-204ENST00000482657 CLCN6P51797 869 aa17.64■□□□□ 0.42
LCNL1-204ENST00000482657 SSRP1Q08945 709 aaKnown RBP17.64■□□□□ 0.42
LCNL1-204ENST00000482657 PNOCQ13519 176 aa17.64■□□□□ 0.42
LCNL1-204ENST00000482657 LZTFL1Q9NQ48 299 aa17.64■□□□□ 0.41
LCNL1-204ENST00000482657 RNF216Q9NWF9 866 aaPredicted RBP17.64■□□□□ 0.41
LCNL1-204ENST00000482657 NPHP4O75161 1426 aaPredicted RBP17.64■□□□□ 0.41
LCNL1-204ENST00000482657 ADAMTS2O95450 1211 aa17.64■□□□□ 0.41
LCNL1-204ENST00000482657 PFKFB1P16118 471 aa17.64■□□□□ 0.41
LCNL1-204ENST00000482657 KRT40Q6A162 431 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms