RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ADAMTS13Q76LX8 1427 aa9.73□□□□□ -0.85
SNX13-208ENST00000482558 MON2Q7Z3U7 1717 aa9.73□□□□□ -0.85
SNX13-208ENST00000482558 IPO8O15397 1037 aaKnown RBP9.73□□□□□ -0.85
SNX13-208ENST00000482558 ATP1A2P50993 1020 aa9.73□□□□□ -0.85
SNX13-208ENST00000482558 ELOAQ14241 798 aaKnown RBP9.73□□□□□ -0.85
SNX13-208ENST00000482558 CRTC2Q53ET0 693 aaPredicted RBP9.73□□□□□ -0.85
SNX13-208ENST00000482558 NOL8Q76FK4 1167 aaKnown RBP9.73□□□□□ -0.85
SNX13-208ENST00000482558 C1orf216Q8TAB5 229 aa9.73□□□□□ -0.85
SNX13-208ENST00000482558 BACH2Q9BYV9 841 aa9.73□□□□□ -0.85
SNX13-208ENST00000482558 AVENQ9NQS1 362 aaPredicted RBP9.73□□□□□ -0.85
SNX13-208ENST00000482558 PCDHGC4Q9Y5F7 938 aa9.73□□□□□ -0.85
SNX13-208ENST00000482558 PTCH1Q13635 1447 aa9.73□□□□□ -0.85
SNX13-208ENST00000482558 NEURL1BA8MQ27 555 aa9.72□□□□□ -0.85
SNX13-208ENST00000482558 NLRP8Q86W28 1048 aa9.72□□□□□ -0.85
SNX13-208ENST00000482558 OGFOD1Q8N543 542 aa9.72□□□□□ -0.85
SNX13-208ENST00000482558 IPO9Q96P70 1041 aaKnown RBP9.72□□□□□ -0.85
SNX13-208ENST00000482558 CDCA7Q9BWT1 371 aaPredicted RBP9.72□□□□□ -0.85
SNX13-208ENST00000482558 POLKQ9UBT6 870 aa9.72□□□□□ -0.85
SNX13-208ENST00000482558 ZMIZ1Q9ULJ6 1067 aa9.72□□□□□ -0.85
SNX13-208ENST00000482558 ITSN1Q15811 1721 aa9.72□□□□□ -0.85
SNX13-208ENST00000482558 AKAP12Q02952 1782 aa9.72□□□□□ -0.85
SNX13-208ENST00000482558 BCAR3O75815 825 aa9.71□□□□□ -0.86
SNX13-208ENST00000482558 ADH6P28332 368 aa9.71□□□□□ -0.86
SNX13-208ENST00000482558 ARID4AP29374 1257 aaPredicted RBP9.71□□□□□ -0.86
SNX13-208ENST00000482558 GTF2IP78347 998 aa9.71□□□□□ -0.86
SNX13-208ENST00000482558 PTK7Q13308 1070 aa9.71□□□□□ -0.86
SNX13-208ENST00000482558 ALDH1L2Q3SY69 923 aa9.71□□□□□ -0.86
SNX13-208ENST00000482558 FAM182BQ5T319 152 aa9.71□□□□□ -0.86
SNX13-208ENST00000482558 C20orf194Q5TEA3 1177 aa9.71□□□□□ -0.86
SNX13-208ENST00000482558 ZKSCAN2Q63HK3 967 aa9.71□□□□□ -0.86
SNX13-208ENST00000482558 CHSY3Q70JA7 882 aa9.71□□□□□ -0.86
SNX13-208ENST00000482558 ZNF594Q96JF6 807 aaPredicted RBP9.71□□□□□ -0.86
SNX13-208ENST00000482558 SEMA6BQ9H3T3 888 aa9.71□□□□□ -0.86
SNX13-208ENST00000482558 DNAAF2Q9NVR5 837 aaKnown RBP9.71□□□□□ -0.86
SNX13-208ENST00000482558 TTC21AQ8NDW8 1320 aa9.71□□□□□ -0.86
SNX13-208ENST00000482558 KIF16BQ96L93 1317 aa9.71□□□□□ -0.86
SNX13-208ENST00000482558 KRTAP9-6A0A140TA67 174 aa9.7□□□□□ -0.86
SNX13-208ENST00000482558 RIPK4P57078 832 aa9.7□□□□□ -0.86
SNX13-208ENST00000482558 CLDN10P78369 228 aa9.7□□□□□ -0.86
SNX13-208ENST00000482558 PSME1Q06323 249 aa9.7□□□□□ -0.86
SNX13-208ENST00000482558 USP4Q13107 963 aa9.7□□□□□ -0.86
SNX13-208ENST00000482558 NOM1Q5C9Z4 860 aaKnown RBP9.7□□□□□ -0.86
SNX13-208ENST00000482558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.7□□□□□ -0.86
SNX13-208ENST00000482558 STK32AQ8WU08 396 aa9.7□□□□□ -0.86
SNX13-208ENST00000482558 RWDD1Q9H446 243 aaPredicted RBP9.7□□□□□ -0.86
SNX13-208ENST00000482558 RRP7AQ9Y3A4 280 aaKnown RBP9.7□□□□□ -0.86
SNX13-208ENST00000482558 FER1L4A9Z1Z3 1794 aa9.69□□□□□ -0.86
SNX13-208ENST00000482558 C3P01024 1663 aa9.69□□□□□ -0.86
SNX13-208ENST00000482558 GNAI1P63096 354 aa9.69□□□□□ -0.86
SNX13-208ENST00000482558 NFE2L2Q16236 605 aa9.69□□□□□ -0.86
SNX13-208ENST00000482558 ZMYM1Q5SVZ6 1142 aa9.69□□□□□ -0.86
SNX13-208ENST00000482558 ZCCHC2Q9C0B9 1178 aaKnown RBP9.69□□□□□ -0.86
SNX13-208ENST00000482558 ROBO2Q9HCK4 1378 aa9.69□□□□□ -0.86
SNX13-208ENST00000482558 NOP58Q9Y2X3 529 aaKnown RBP9.69□□□□□ -0.86
SNX13-208ENST00000482558 MAP2P11137 1827 aaKnown RBP9.68□□□□□ -0.86
SNX13-208ENST00000482558 TOPAZ1Q8N9V7 1692 aa9.68□□□□□ -0.86
SNX13-208ENST00000482558 ANKARQ7Z5J8 1434 aa9.68□□□□□ -0.86
SNX13-208ENST00000482558 TTC21BQ7Z4L5 1316 aa9.68□□□□□ -0.86
SNX13-208ENST00000482558 SOWAHDA6NJG2 315 aa9.68□□□□□ -0.86
SNX13-208ENST00000482558 IL13P35225 146 aa9.68□□□□□ -0.86
SNX13-208ENST00000482558 DOC2BQ14184 412 aa9.68□□□□□ -0.86
SNX13-208ENST00000482558 TLR1Q15399 786 aa9.68□□□□□ -0.86
SNX13-208ENST00000482558 TMEM164Q5U3C3 297 aa9.68□□□□□ -0.86
SNX13-208ENST00000482558 GIMAP6Q6P9H5 292 aa9.68□□□□□ -0.86
SNX13-208ENST00000482558 ANKMY2Q8IV38 441 aa9.68□□□□□ -0.86
SNX13-208ENST00000482558 FTSJ3Q8IY81 847 aaKnown RBP9.68□□□□□ -0.86
SNX13-208ENST00000482558 BCL11AQ9H165 835 aa9.68□□□□□ -0.86
SNX13-208ENST00000482558 IFT57Q9NWB7 429 aa9.68□□□□□ -0.86
SNX13-208ENST00000482558 DDX19BQ9UMR2 479 aa9.68□□□□□ -0.86
SNX13-208ENST00000482558 KIF24Q5T7B8 1368 aa9.67□□□□□ -0.86
SNX13-208ENST00000482558 LTKP29376 864 aa9.67□□□□□ -0.86
SNX13-208ENST00000482558 GATA4P43694 442 aa9.67□□□□□ -0.86
SNX13-208ENST00000482558 MVPQ14764 893 aaKnown RBP9.67□□□□□ -0.86
SNX13-208ENST00000482558 DZIP1LQ8IYY4 767 aaKnown RBP9.67□□□□□ -0.86
SNX13-208ENST00000482558 LARGE2Q8N3Y3 721 aa9.67□□□□□ -0.86
SNX13-208ENST00000482558 FAM200AQ8TCP9 573 aa9.67□□□□□ -0.86
SNX13-208ENST00000482558 ARHGAP45Q92619 1136 aa9.67□□□□□ -0.86
SNX13-208ENST00000482558 FRAT1Q92837 279 aaPredicted RBP9.67□□□□□ -0.86
SNX13-208ENST00000482558 ETNK1Q9HBU6 452 aa9.67□□□□□ -0.86
SNX13-208ENST00000482558 LRRC7Q96NW7 1537 aa9.66□□□□□ -0.86
SNX13-208ENST00000482558 USP6P35125 1406 aa9.66□□□□□ -0.86
SNX13-208ENST00000482558 USP31Q70CQ4 1352 aa9.66□□□□□ -0.86
SNX13-208ENST00000482558 ATXN7O15265 892 aaPredicted RBP9.66□□□□□ -0.86
SNX13-208ENST00000482558 MARCH6O60337 910 aa9.66□□□□□ -0.86
SNX13-208ENST00000482558 SPATA31C1P0DKV0 1188 aa9.66□□□□□ -0.86
SNX13-208ENST00000482558 ATP4AP20648 1035 aa9.66□□□□□ -0.86
SNX13-208ENST00000482558 PRKAR2BP31323 418 aa9.66□□□□□ -0.86
SNX13-208ENST00000482558 TAF7LQ5H9L4 462 aa9.66□□□□□ -0.86
SNX13-208ENST00000482558 NPAS4Q8IUM7 802 aa9.66□□□□□ -0.86
SNX13-208ENST00000482558 SIX5Q8N196 739 aa9.66□□□□□ -0.86
SNX13-208ENST00000482558 SMC4Q9NTJ3 1288 aa9.66□□□□□ -0.86
SNX13-208ENST00000482558 BCCIPQ9P287 314 aaKnown RBP eCLIP9.66□□□□□ -0.868e-7■■■■□ 21.9
SNX13-208ENST00000482558 KIAA1024Q9UPX6 916 aa9.66□□□□□ -0.86
SNX13-208ENST00000482558 RIMS1Q86UR5 1692 aaKnown RBP9.66□□□□□ -0.86
SNX13-208ENST00000482558 ACEP12821 1306 aa9.65□□□□□ -0.86
SNX13-208ENST00000482558 ANKRD33BA6NCL7 494 aa9.65□□□□□ -0.86
SNX13-208ENST00000482558 EXOSC9Q06265 439 aaKnown RBP9.65□□□□□ -0.86
SNX13-208ENST00000482558 DPYDQ12882 1025 aa9.65□□□□□ -0.86
SNX13-208ENST00000482558 PHLDB3Q6NSJ2 640 aa9.65□□□□□ -0.86
SNX13-208ENST00000482558 ATF7IPQ6VMQ6 1270 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms