RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 MTMR14Q8NCE2 650 aa12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 TTLL11Q8NHH1 800 aa12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 TSR2Q969E8 191 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 UNC93B1Q9H1C4 597 aa12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 GREM2Q9H772 168 aa12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 BSDC1Q9NW68 430 aaPredicted RBP12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 CPA4Q9UI42 421 aa12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 SPEF2Q9C093 1822 aa12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 PSMC4P43686 418 aa12.08□□□□□ -0.48
SMARCE1-210ENST00000481231 BCAMP50895 628 aa12.08□□□□□ -0.48
SMARCE1-210ENST00000481231 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-210ENST00000481231 GDF15Q99988 308 aa12.08□□□□□ -0.48
SMARCE1-210ENST00000481231 JAG2Q9Y219 1238 aa12.08□□□□□ -0.48
SMARCE1-210ENST00000481231 MYPNQ86TC9 1320 aa12.08□□□□□ -0.48
SMARCE1-210ENST00000481231 NEURL1BA8MQ27 555 aa12.07□□□□□ -0.48
SMARCE1-210ENST00000481231 WDHD1O75717 1129 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-210ENST00000481231 FMNL1O95466 1100 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-210ENST00000481231 RBM5P52756 815 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMARCE1-210ENST00000481231 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
SMARCE1-210ENST00000481231 G2E3Q7L622 706 aa12.07□□□□□ -0.48
SMARCE1-210ENST00000481231 STK31Q9BXU1 1019 aa12.07□□□□□ -0.48
SMARCE1-210ENST00000481231 PRDM6Q9NQX0 595 aa12.07□□□□□ -0.48
SMARCE1-210ENST00000481231 ZMYND8Q9ULU4 1186 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-210ENST00000481231 EYSQ5T1H1 3165 aa12.06□□□□□ -0.48
SMARCE1-210ENST00000481231 SNAP23O00161 211 aa12.06□□□□□ -0.48
SMARCE1-210ENST00000481231 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
SMARCE1-210ENST00000481231 PRKCZQ05513 592 aa12.06□□□□□ -0.48
SMARCE1-210ENST00000481231 C17orf99Q6UX52 265 aa12.06□□□□□ -0.48
SMARCE1-210ENST00000481231 UBE3BQ7Z3V4 1068 aa12.06□□□□□ -0.48
SMARCE1-210ENST00000481231 C7orf61Q8IZ16 206 aa12.06□□□□□ -0.48
SMARCE1-210ENST00000481231 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.06□□□□□ -0.48
SMARCE1-210ENST00000481231 TEPSINQ96N21 525 aa12.06□□□□□ -0.48
SMARCE1-210ENST00000481231 CD209Q9NNX6 404 aa12.06□□□□□ -0.48
SMARCE1-210ENST00000481231 LEMD3Q9Y2U8 911 aa12.06□□□□□ -0.48
SMARCE1-210ENST00000481231 CSADQ9Y600 493 aa12.06□□□□□ -0.48
SMARCE1-210ENST00000481231 ECM29Q5VYK3 1845 aa12.06□□□□□ -0.48
SMARCE1-210ENST00000481231 SPDYE5A6NIY4 337 aa12.05□□□□□ -0.48
SMARCE1-210ENST00000481231 H7C1W4 665 aa12.05□□□□□ -0.48
SMARCE1-210ENST00000481231 SGPL1O95470 568 aa12.05□□□□□ -0.48
SMARCE1-210ENST00000481231 CETPP11597 493 aa12.05□□□□□ -0.48
SMARCE1-210ENST00000481231 SYN1P17600 705 aa12.05□□□□□ -0.48
SMARCE1-210ENST00000481231 BMP8BP34820 402 aa12.05□□□□□ -0.48
SMARCE1-210ENST00000481231 UBXN2AP68543 259 aa12.05□□□□□ -0.48
SMARCE1-210ENST00000481231 LRIT3Q3SXY7 679 aa12.05□□□□□ -0.48
SMARCE1-210ENST00000481231 CCDC184Q52MB2 194 aa12.05□□□□□ -0.48
SMARCE1-210ENST00000481231 DIS3LQ8TF46 1054 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-210ENST00000481231 TMEM39BQ9GZU3 492 aa12.05□□□□□ -0.48
SMARCE1-210ENST00000481231 SNCAIPQ9Y6H5 919 aa12.05□□□□□ -0.48
SMARCE1-210ENST00000481231 TCP10L2B9ZVM9 353 aa12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 IRF6O14896 467 aa12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 SLC4A2P04920 1241 aa12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 HOXD10P28358 340 aa12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 GCKRQ14397 625 aa12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 CCDC27Q2M243 656 aa12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 TWISTNBQ3B726 338 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 WWC1Q8IX03 1113 aa12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 PAWRQ96IZ0 340 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 DEFB118Q96PH6 123 aa12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 TDRD3Q9H7E2 651 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 ZNF70Q9UC06 446 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 GABRQQ9UN88 632 aa12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 RPTORQ8N122 1335 aa12.04□□□□□ -0.48
SMARCE1-210ENST00000481231 TFRCP02786 760 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 ELNP15502 786 aa12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 ITGA6P23229 1130 aa12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 IGHMBP2P38935 993 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 MAGEA10P43363 369 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 KCNJ4P48050 445 aa12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 CASP7P55210 303 aa12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 FLIIQ13045 1269 aa12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 SNAPC2Q13487 334 aa12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 TNFAIP1Q13829 316 aa12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 SPDYE2Q495Y8 402 aa12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 TDHQ8IZJ6 230 aa12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 GUCD1Q96NT3 240 aa12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 PLA2G12BQ9BX93 195 aa12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 ZCCHC17Q9NP64 241 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 ADGRA2Q96PE1 1338 aa12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 ALPK3Q96L96 1907 aa12.03□□□□□ -0.48
SMARCE1-210ENST00000481231 INHAP05111 366 aa12.02□□□□□ -0.49
SMARCE1-210ENST00000481231 SLAIN1Q8ND83 568 aa12.02□□□□□ -0.49
SMARCE1-210ENST00000481231 ZKSCAN4Q969J2 545 aaPredicted RBP12.02□□□□□ -0.49
SMARCE1-210ENST00000481231 FAM161BQ96MY7 647 aa12.02□□□□□ -0.49
SMARCE1-210ENST00000481231 RAPGEFL1Q9UHV5 662 aa12.02□□□□□ -0.49
SMARCE1-210ENST00000481231 IL16Q14005 1332 aa12.02□□□□□ -0.49
SMARCE1-210ENST00000481231 IRS2Q9Y4H2 1338 aa12.02□□□□□ -0.49
SMARCE1-210ENST00000481231 PDHXO00330 501 aa12.01□□□□□ -0.49
SMARCE1-210ENST00000481231 CSF1RP07333 972 aa12.01□□□□□ -0.49
SMARCE1-210ENST00000481231 COL9A1P20849 921 aa12.01□□□□□ -0.49
SMARCE1-210ENST00000481231 CHRNDQ07001 517 aa12.01□□□□□ -0.49
SMARCE1-210ENST00000481231 ERO1BQ86YB8 467 aa12.01□□□□□ -0.49
SMARCE1-210ENST00000481231 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.01□□□□□ -0.49
SMARCE1-210ENST00000481231 HELBQ8NG08 1087 aaPredicted RBP12.01□□□□□ -0.49
SMARCE1-210ENST00000481231 DNAAF4Q8WXU2 420 aa12.01□□□□□ -0.49
SMARCE1-210ENST00000481231 WRNIP1Q96S55 665 aa12.01□□□□□ -0.49
SMARCE1-210ENST00000481231 MPHOSPH8Q99549 860 aa12.01□□□□□ -0.49
SMARCE1-210ENST00000481231 ANKRD2Q9GZV1 360 aa12.01□□□□□ -0.49
SMARCE1-210ENST00000481231 MYH16Q9H6N6 1097 aa12.01□□□□□ -0.49
SMARCE1-210ENST00000481231 ADCY3O60266 1144 aa12□□□□□ -0.49
SMARCE1-210ENST00000481231 TAF5LO75529 589 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms