RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 OGFOD1Q8N543 542 aa15.06■□□□□ 0
SHROOM3-205ENST00000481002 DNAJC2Q99543 621 aaKnown RBP15.06■□□□□ 0
SHROOM3-205ENST00000481002 ANTXR1Q9H6X2 564 aa15.06■□□□□ 0
SHROOM3-205ENST00000481002 PIH1D3Q9NQM4 214 aaKnown RBP15.06■□□□□ 0
SHROOM3-205ENST00000481002 PAG1Q9NWQ8 432 aa15.06■□□□□ 0
SHROOM3-205ENST00000481002 HDAC9Q9UKV0 1011 aa15.06■□□□□ 0
SHROOM3-205ENST00000481002 TTF2Q9UNY4 1162 aaKnown RBP15.06■□□□□ 0
SHROOM3-205ENST00000481002 GOLIM4O00461 696 aa15.05■□□□□ -0
SHROOM3-205ENST00000481002 ZNF526Q8TF50 670 aaPredicted RBP15.05■□□□□ -0
SHROOM3-205ENST00000481002 EDC3Q96F86 508 aaKnown RBP15.05■□□□□ -0
SHROOM3-205ENST00000481002 NMRK2Q9NPI5 230 aa15.05■□□□□ -0
SHROOM3-205ENST00000481002 ADARB2Q9NS39 739 aaKnown RBP15.05■□□□□ -0
SHROOM3-205ENST00000481002 LRP2BPQ9P2M1 347 aa15.05■□□□□ -0
SHROOM3-205ENST00000481002 SERPINA10Q9UK55 444 aa15.05■□□□□ -0
SHROOM3-205ENST00000481002 MAST3O60307 1309 aa15.05■□□□□ -0
SHROOM3-205ENST00000481002 AK9Q5TCS8 1911 aa15.05■□□□□ -0
SHROOM3-205ENST00000481002 POLR2AP24928 1970 aaKnown RBP15.04■□□□□ -0
SHROOM3-205ENST00000481002 ECM29Q5VYK3 1845 aa15.04■□□□□ -0
SHROOM3-205ENST00000481002 F8W031 263 aaPredicted RBP15.04■□□□□ -0
SHROOM3-205ENST00000481002 EPHX2P34913 555 aa15.04■□□□□ -0
SHROOM3-205ENST00000481002 HHIPL2Q6UWX4 724 aa15.04■□□□□ -0
SHROOM3-205ENST00000481002 MTMR14Q8NCE2 650 aa15.04■□□□□ -0
SHROOM3-205ENST00000481002 NSUN4Q96CB9 384 aaKnown RBP15.04■□□□□ -0
SHROOM3-205ENST00000481002 FAM163AQ96GL9 167 aaPredicted RBP15.04■□□□□ -0
SHROOM3-205ENST00000481002 TAF1DQ9H5J8 278 aaPredicted RBP15.04■□□□□ -0
SHROOM3-205ENST00000481002 MYOZ2Q9NPC6 264 aa15.04■□□□□ -0
SHROOM3-205ENST00000481002 MAST2Q6P0Q8 1798 aa15.03■□□□□ -0
SHROOM3-205ENST00000481002 MECOMQ03112 1051 aa15.03■□□□□ -0
SHROOM3-205ENST00000481002 TMED8Q6PL24 325 aaPredicted RBP15.03■□□□□ -0
SHROOM3-205ENST00000481002 SAMD7Q7Z3H4 446 aa15.03■□□□□ -0
SHROOM3-205ENST00000481002 ZNF784Q8NCA9 323 aaPredicted RBP15.03■□□□□ -0
SHROOM3-205ENST00000481002 ZNF384Q8TF68 577 aa15.03■□□□□ -0
SHROOM3-205ENST00000481002 ZBED3Q96IU2 234 aaPredicted RBP15.03■□□□□ -0
SHROOM3-205ENST00000481002 GPBP1L1Q9HC44 474 aaPredicted RBP15.03■□□□□ -0
SHROOM3-205ENST00000481002 RAI14Q9P0K7 980 aa15.03■□□□□ -0
SHROOM3-205ENST00000481002 ADAMTSL1Q8N6G6 1762 aa15.03■□□□□ -0
SHROOM3-205ENST00000481002 IDH1O75874 414 aaKnown RBP15.02■□□□□ -0
SHROOM3-205ENST00000481002 EGFRP00533 1210 aa15.02■□□□□ -0
SHROOM3-205ENST00000481002 CRKP46108 304 aa15.02■□□□□ -0
SHROOM3-205ENST00000481002 HIRAP54198 1017 aaPredicted RBP15.02■□□□□ -0
SHROOM3-205ENST00000481002 MAP3K12Q12852 859 aa15.02■□□□□ -0
SHROOM3-205ENST00000481002 CFAP100Q494V2 611 aa15.02■□□□□ -0
SHROOM3-205ENST00000481002 USP50Q70EL3 339 aaPredicted RBP15.02■□□□□ -0
SHROOM3-205ENST00000481002 PNMA8AQ86V59 439 aaPredicted RBP15.02■□□□□ -0
SHROOM3-205ENST00000481002 DZIP1Q86YF9 867 aaKnown RBP15.02■□□□□ -0
SHROOM3-205ENST00000481002 SLF2Q8IX21 1173 aa15.02■□□□□ -0
SHROOM3-205ENST00000481002 KBTBD3Q8NAB2 608 aa15.02■□□□□ -0
SHROOM3-205ENST00000481002 TEKT1Q969V4 418 aa15.02■□□□□ -0
SHROOM3-205ENST00000481002 GTF3C3Q9Y5Q9 886 aa15.02■□□□□ -0
SHROOM3-205ENST00000481002 MAP4K4O95819 1239 aaPredicted RBP15.01□□□□□ -0.01
SHROOM3-205ENST00000481002 LDHCP07864 332 aa15.01□□□□□ -0.01
SHROOM3-205ENST00000481002 GSTO1P78417 241 aa15.01□□□□□ -0.01
SHROOM3-205ENST00000481002 DLGAP5Q15398 846 aa15.01□□□□□ -0.01
SHROOM3-205ENST00000481002 DIXDC1Q155Q3 683 aa15.01□□□□□ -0.01
SHROOM3-205ENST00000481002 KIF4BQ2VIQ3 1234 aa15.01□□□□□ -0.01
SHROOM3-205ENST00000481002 TBC1D10BQ4KMP7 808 aaPredicted RBP15.01□□□□□ -0.01
SHROOM3-205ENST00000481002 RBM26Q5T8P6 1007 aaKnown RBP15.01□□□□□ -0.01
SHROOM3-205ENST00000481002 TTC22Q5TAA0 569 aa15.01□□□□□ -0.01
SHROOM3-205ENST00000481002 TRPM4Q8TD43 1214 aa15.01□□□□□ -0.01
SHROOM3-205ENST00000481002 EVI5LQ96CN4 794 aa15.01□□□□□ -0.01
SHROOM3-205ENST00000481002 ZDHHC15Q96MV8 337 aa15.01□□□□□ -0.01
SHROOM3-205ENST00000481002 GAKO14976 1311 aa15□□□□□ -0.01
SHROOM3-205ENST00000481002 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
SHROOM3-205ENST00000481002 WNT10BO00744 389 aa15□□□□□ -0.01
SHROOM3-205ENST00000481002 SPDYE6P0CI01 402 aa15□□□□□ -0.01
SHROOM3-205ENST00000481002 NAA16Q6N069 864 aaPredicted RBP15□□□□□ -0.01
SHROOM3-205ENST00000481002 APOBEC3HQ6NTF7 200 aaKnown RBP15□□□□□ -0.01
SHROOM3-205ENST00000481002 SKAP1Q86WV1 359 aa15□□□□□ -0.01
SHROOM3-205ENST00000481002 TICAM2Q86XR7 235 aa15□□□□□ -0.01
SHROOM3-205ENST00000481002 PRMT6Q96LA8 375 aaPredicted RBP15□□□□□ -0.01
SHROOM3-205ENST00000481002 PGAP2Q9UHJ9 254 aa15□□□□□ -0.01
SHROOM3-205ENST00000481002 DAGLAQ9Y4D2 1042 aa15□□□□□ -0.01
SHROOM3-205ENST00000481002 PCDHAC2Q9Y5I4 1007 aa15□□□□□ -0.01
SHROOM3-205ENST00000481002 MROH7-TTC4A0A0A0MT08 1334 aa14.99□□□□□ -0.01
SHROOM3-205ENST00000481002 KIF3CO14782 793 aa14.99□□□□□ -0.01
SHROOM3-205ENST00000481002 GSPT1P15170 499 aaKnown RBP14.99□□□□□ -0.01
SHROOM3-205ENST00000481002 PDE6AP16499 860 aa14.99□□□□□ -0.01
SHROOM3-205ENST00000481002 RBM5P52756 815 aaKnown RBP eCLIP14.99□□□□□ -0.01
SHROOM3-205ENST00000481002 NBPF9Q3BBW0 867 aa14.99□□□□□ -0.01
SHROOM3-205ENST00000481002 SLC9C2Q5TAH2 1124 aa14.99□□□□□ -0.01
SHROOM3-205ENST00000481002 ZSCAN25Q6NSZ9 544 aa14.99□□□□□ -0.01
SHROOM3-205ENST00000481002 MAGEB6Q8N7X4 407 aa14.99□□□□□ -0.01
SHROOM3-205ENST00000481002 ZC3H15Q8WU90 426 aaKnown RBP14.99□□□□□ -0.01
SHROOM3-205ENST00000481002 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.99□□□□□ -0.01
SHROOM3-205ENST00000481002 GPR75-ASB3A0A0A6YYF3 556 aa14.98□□□□□ -0.01
SHROOM3-205ENST00000481002 TCRBV5S4A2TA0A5A2 114 aa14.98□□□□□ -0.01
SHROOM3-205ENST00000481002 CYP7A1P22680 504 aa14.98□□□□□ -0.01
SHROOM3-205ENST00000481002 ADD2P35612 726 aa14.98□□□□□ -0.01
SHROOM3-205ENST00000481002 UBE3CQ15386 1083 aa14.98□□□□□ -0.01
SHROOM3-205ENST00000481002 LRRFIP1Q32MZ4 808 aaKnown RBP14.98□□□□□ -0.01
SHROOM3-205ENST00000481002 CNTROBQ8N137 903 aa14.98□□□□□ -0.01
SHROOM3-205ENST00000481002 TRIM6-TRIM34B2RNG4 842 aa14.97□□□□□ -0.01
SHROOM3-205ENST00000481002 ZFYP08048 801 aaPredicted RBP14.97□□□□□ -0.01
SHROOM3-205ENST00000481002 RGS3P49796 1198 aa14.97□□□□□ -0.01
SHROOM3-205ENST00000481002 PPP4CP60510 307 aa14.97□□□□□ -0.01
SHROOM3-205ENST00000481002 EAPPQ56P03 285 aaPredicted RBP14.97□□□□□ -0.01
SHROOM3-205ENST00000481002 ADGRA1Q86SQ6 560 aa14.97□□□□□ -0.01
SHROOM3-205ENST00000481002 LDHDQ86WU2 507 aa14.97□□□□□ -0.01
SHROOM3-205ENST00000481002 FSD1Q9BTV5 496 aa14.97□□□□□ -0.01
SHROOM3-205ENST00000481002 CDK5RAP2Q96SN8 1893 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms