RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 GIPRP48546 466 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 PPM1FP49593 454 aaPredicted RBP10.07□□□□□ -0.8
LSM5-210ENST00000480956 PICALMQ13492 652 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 SIM2Q14190 667 aaPredicted RBP10.07□□□□□ -0.8
LSM5-210ENST00000480956 PLA2G2CQ5R387 149 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 PASD1Q8IV76 773 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 MAGEB6Q8N7X4 407 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 CDC5LQ99459 802 aaKnown RBP10.07□□□□□ -0.8
LSM5-210ENST00000480956 RTFDC1Q9BY42 306 aaPredicted RBP10.07□□□□□ -0.8
LSM5-210ENST00000480956 ETNK1Q9HBU6 452 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 ZMYM5Q9UJ78 669 aa10.07□□□□□ -0.8
LSM5-210ENST00000480956 GJB6O95452 261 aa10.06□□□□□ -0.8
LSM5-210ENST00000480956 MMP16P51512 607 aa10.06□□□□□ -0.8
LSM5-210ENST00000480956 ANKRD42Q8N9B4 389 aa10.06□□□□□ -0.8
LSM5-210ENST00000480956 ENOX1Q8TC92 643 aaKnown RBP10.06□□□□□ -0.8
LSM5-210ENST00000480956 HOOK2Q96ED9 719 aa10.06□□□□□ -0.8
LSM5-210ENST00000480956 MTMR8Q96EF0 704 aa10.06□□□□□ -0.8
LSM5-210ENST00000480956 SLC6A16Q9GZN6 736 aa10.06□□□□□ -0.8
LSM5-210ENST00000480956 FAM13BQ9NYF5 915 aa10.06□□□□□ -0.8
LSM5-210ENST00000480956 USP25Q9UHP3 1055 aa10.06□□□□□ -0.8
LSM5-210ENST00000480956 MAPRE3Q9UPY8 281 aa10.06□□□□□ -0.8
LSM5-210ENST00000480956 PABPC4Q13310 644 aaKnown RBP eCLIP10.05□□□□□ -0.87e-10■□□□□ 11.1
LSM5-210ENST00000480956 SNAP47Q5SQN1 464 aa10.05□□□□□ -0.8
LSM5-210ENST00000480956 IL31Q6EBC2 164 aa10.05□□□□□ -0.8
LSM5-210ENST00000480956 SLITRK4Q8IW52 837 aa10.05□□□□□ -0.8
LSM5-210ENST00000480956 ENAHQ8N8S7 591 aaPredicted RBP10.05□□□□□ -0.8
LSM5-210ENST00000480956 ST13P5Q8NFI4 369 aaPredicted RBP10.05□□□□□ -0.8
LSM5-210ENST00000480956 SNX29Q8TEQ0 813 aa10.05□□□□□ -0.8
LSM5-210ENST00000480956 ATG3Q9NT62 314 aa10.05□□□□□ -0.8
LSM5-210ENST00000480956 KLK14Q9P0G3 267 aa10.05□□□□□ -0.8
LSM5-210ENST00000480956 GARTP22102 1010 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 ITKQ08881 620 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 MTMR1Q13613 665 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 RTN1Q16799 776 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 FBXW10Q5XX13 1052 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 NECAB2Q7Z6G3 386 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 ZBTB46Q86UZ6 589 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 TREML1Q86YW5 311 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 CCDC89Q8N998 374 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 GOLM1Q8NBJ4 401 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 LUZP4Q9P127 313 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 ZNF180Q9UJW8 692 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 GTF2A1LQ9UNN4 478 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 KAT6BQ8WYB5 2073 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 PRPF3O43395 683 aaKnown RBP10.04□□□□□ -0.8
LSM5-210ENST00000480956 TRIM27P14373 513 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 CRKP46108 304 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 NEK3P51956 506 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 ERVK-9P63128 1117 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 MAP3K11Q16584 847 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 PODNQ7Z5L7 613 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 OR6P1Q8NGX9 317 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 CHMP4CQ96CF2 233 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 CAMKK2Q96RR4 588 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 OSBPL3Q9H4L5 887 aa10.04□□□□□ -0.8
LSM5-210ENST00000480956 DYTNA2CJ06 578 aa10.03□□□□□ -0.8
LSM5-210ENST00000480956 GSG1L2A8MUP6 293 aa10.03□□□□□ -0.8
LSM5-210ENST00000480956 DDAH1O94760 285 aa10.03□□□□□ -0.8
LSM5-210ENST00000480956 MAP3K10Q02779 954 aa10.03□□□□□ -0.8
LSM5-210ENST00000480956 ALDH16A1Q8IZ83 802 aa10.03□□□□□ -0.8
LSM5-210ENST00000480956 FERD3LQ96RJ6 166 aa10.03□□□□□ -0.8
LSM5-210ENST00000480956 ZFYVE28Q9HCC9 887 aa10.03□□□□□ -0.8
LSM5-210ENST00000480956 NGRNQ9NPE2 291 aaKnown RBP10.03□□□□□ -0.8
LSM5-210ENST00000480956 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
LSM5-210ENST00000480956 PUF60Q9UHX1 559 aaKnown RBP10.03□□□□□ -0.8
LSM5-210ENST00000480956 PF4P02776 101 aa10.02□□□□□ -0.8
LSM5-210ENST00000480956 HTR3AP46098 478 aa10.02□□□□□ -0.8
LSM5-210ENST00000480956 WNT7BP56706 349 aa10.02□□□□□ -0.8
LSM5-210ENST00000480956 SETDB1Q15047 1291 aa10.02□□□□□ -0.8
LSM5-210ENST00000480956 MTFR1Q15390 333 aa10.02□□□□□ -0.8
LSM5-210ENST00000480956 SLC4A8Q2Y0W8 1093 aa10.02□□□□□ -0.8
LSM5-210ENST00000480956 POTEAQ6S8J7 498 aa10.02□□□□□ -0.8
LSM5-210ENST00000480956 MORC1Q86VD1 984 aa10.02□□□□□ -0.8
LSM5-210ENST00000480956 PHC3Q8NDX5 983 aa10.02□□□□□ -0.8
LSM5-210ENST00000480956 ZNF669Q96BR6 464 aaPredicted RBP10.02□□□□□ -0.8
LSM5-210ENST00000480956 TNKS2Q9H2K2 1166 aa10.02□□□□□ -0.8
LSM5-210ENST00000480956 RASSF10A6NK89 507 aa10.02□□□□□ -0.81
LSM5-210ENST00000480956 RFPL3O75679 317 aa10.02□□□□□ -0.81
LSM5-210ENST00000480956 RNASEH2AO75792 299 aaKnown RBP10.02□□□□□ -0.81
LSM5-210ENST00000480956 ZRANB2O95218 330 aaKnown RBP eCLIP10.02□□□□□ -0.81
LSM5-210ENST00000480956 SEZ6Q53EL9 994 aa10.02□□□□□ -0.81
LSM5-210ENST00000480956 C4orf48Q5BLP8 95 aa10.02□□□□□ -0.81
LSM5-210ENST00000480956 FOXJ1Q92949 421 aa10.02□□□□□ -0.81
LSM5-210ENST00000480956 RSPH9Q9H1X1 276 aaPredicted RBP10.02□□□□□ -0.81
LSM5-210ENST00000480956 OBP2AQ9NY56 170 aa10.02□□□□□ -0.81
LSM5-210ENST00000480956 SLC5A4Q9NY91 659 aa10.02□□□□□ -0.81
LSM5-210ENST00000480956 VSTM5A8MXK1 200 aa10.01□□□□□ -0.81
LSM5-210ENST00000480956 VDRP11473 427 aa10.01□□□□□ -0.81
LSM5-210ENST00000480956 SMTNP53814 917 aa10.01□□□□□ -0.81
LSM5-210ENST00000480956 GRM2Q14416 872 aa10.01□□□□□ -0.81
LSM5-210ENST00000480956 PPP2R5EQ16537 467 aa10.01□□□□□ -0.81
LSM5-210ENST00000480956 STK11IPQ8N1F8 1099 aa10.01□□□□□ -0.81
LSM5-210ENST00000480956 YIPF4Q9BSR8 244 aa10.01□□□□□ -0.81
LSM5-210ENST00000480956 PPP4R2Q9NY27 417 aa10.01□□□□□ -0.81
LSM5-210ENST00000480956 TLR6Q9Y2C9 796 aa10.01□□□□□ -0.81
LSM5-210ENST00000480956 RPGRIP1LQ68CZ1 1315 aa10.01□□□□□ -0.81
LSM5-210ENST00000480956 SERTM1A2A2V5 107 aa10□□□□□ -0.81
LSM5-210ENST00000480956 RFPL1O75677 317 aa10□□□□□ -0.81
LSM5-210ENST00000480956 EYA4O95677 639 aa10□□□□□ -0.81
LSM5-210ENST00000480956 CBX2Q14781 532 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms