RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 PODNQ7Z5L7 613 aa17.7■□□□□ 0.42
SNRNP200-205ENST00000480835 PSMD1Q99460 953 aa17.7■□□□□ 0.42
SNRNP200-205ENST00000480835 VPS33BQ9H267 617 aa17.7■□□□□ 0.42
SNRNP200-205ENST00000480835 ZNF219Q9P2Y4 722 aaPredicted RBP17.7■□□□□ 0.42
SNRNP200-205ENST00000480835 CTNNA3Q9UI47 895 aa17.7■□□□□ 0.42
SNRNP200-205ENST00000480835 PALD1Q9ULE6 856 aa17.7■□□□□ 0.42
SNRNP200-205ENST00000480835 SNX14Q9Y5W7 946 aa17.7■□□□□ 0.42
SNRNP200-205ENST00000480835 SLC27A2O14975 620 aa17.69■□□□□ 0.42
SNRNP200-205ENST00000480835 GSTO1P78417 241 aa17.69■□□□□ 0.42
SNRNP200-205ENST00000480835 TSGA10IPQ3SY00 556 aa17.69■□□□□ 0.42
SNRNP200-205ENST00000480835 DALRD3Q5D0E6 543 aaKnown RBP17.69■□□□□ 0.42
SNRNP200-205ENST00000480835 ILDR2Q71H61 639 aa17.69■□□□□ 0.42
SNRNP200-205ENST00000480835 NSUN4Q96CB9 384 aaKnown RBP17.69■□□□□ 0.42
SNRNP200-205ENST00000480835 STRBPQ96SI9 672 aaKnown RBP17.69■□□□□ 0.42
SNRNP200-205ENST00000480835 DAXXQ9UER7 740 aaPredicted RBP17.69■□□□□ 0.42
SNRNP200-205ENST00000480835 SUGT1Q9Y2Z0 365 aa17.69■□□□□ 0.42
SNRNP200-205ENST00000480835 ST18O60284 1047 aa17.68■□□□□ 0.42
SNRNP200-205ENST00000480835 MECOMQ03112 1051 aa17.68■□□□□ 0.42
SNRNP200-205ENST00000480835 KIAA2012Q0VF49 1180 aa17.68■□□□□ 0.42
SNRNP200-205ENST00000480835 KRT32Q14532 448 aa17.68■□□□□ 0.42
SNRNP200-205ENST00000480835 ALX1Q15699 326 aa17.68■□□□□ 0.42
SNRNP200-205ENST00000480835 DZIP1Q86YF9 867 aaKnown RBP17.68■□□□□ 0.42
SNRNP200-205ENST00000480835 TM6SF1Q9BZW5 370 aa17.68■□□□□ 0.42
SNRNP200-205ENST00000480835 MYH2Q9UKX2 1941 aa17.68■□□□□ 0.42
SNRNP200-205ENST00000480835 MBD4O95243 580 aa17.67■□□□□ 0.42
SNRNP200-205ENST00000480835 LDHCP07864 332 aa17.67■□□□□ 0.42
SNRNP200-205ENST00000480835 PRDX5P30044 214 aa17.67■□□□□ 0.42
SNRNP200-205ENST00000480835 HSCBQ8IWL3 235 aa17.67■□□□□ 0.42
SNRNP200-205ENST00000480835 SLF2Q8IX21 1173 aa17.67■□□□□ 0.42
SNRNP200-205ENST00000480835 ZMYM6O95789 1325 aa17.67■□□□□ 0.42
SNRNP200-205ENST00000480835 FER1L6Q2WGJ9 1857 aa17.67■□□□□ 0.42
SNRNP200-205ENST00000480835 PSME4Q14997 1843 aa17.66■□□□□ 0.42
SNRNP200-205ENST00000480835 LAMA4Q16363 1823 aa17.66■□□□□ 0.42
SNRNP200-205ENST00000480835 ARFGEF1Q9Y6D6 1849 aa17.66■□□□□ 0.42
SNRNP200-205ENST00000480835 MAGEB6P1A0A0J9YX57 407 aa17.66■□□□□ 0.42
SNRNP200-205ENST00000480835 PATL2C9JE40 543 aaKnown RBP17.66■□□□□ 0.42
SNRNP200-205ENST00000480835 PSMA5P28066 241 aa17.66■□□□□ 0.42
SNRNP200-205ENST00000480835 FKBP1AP62942 108 aaKnown RBP17.66■□□□□ 0.42
SNRNP200-205ENST00000480835 GTF2IP78347 998 aa17.66■□□□□ 0.42
SNRNP200-205ENST00000480835 VPS53Q5VIR6 699 aa17.66■□□□□ 0.42
SNRNP200-205ENST00000480835 CERS3Q8IU89 383 aa17.66■□□□□ 0.42
SNRNP200-205ENST00000480835 RASEFQ8IZ41 740 aa17.66■□□□□ 0.42
SNRNP200-205ENST00000480835 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
SNRNP200-205ENST00000480835 DOK7Q18PE1 504 aa17.65■□□□□ 0.42
SNRNP200-205ENST00000480835 MFSD14BQ5SR56 506 aa17.65■□□□□ 0.42
SNRNP200-205ENST00000480835 TTLL5Q6EMB2 1281 aa17.65■□□□□ 0.42
SNRNP200-205ENST00000480835 ZNF384Q8TF68 577 aa17.65■□□□□ 0.42
SNRNP200-205ENST00000480835 TBC1D2Q9BYX2 928 aa17.65■□□□□ 0.42
SNRNP200-205ENST00000480835 JAG2Q9Y219 1238 aa17.65■□□□□ 0.42
SNRNP200-205ENST00000480835 FOXP2O15409 715 aa17.64■□□□□ 0.41
SNRNP200-205ENST00000480835 PPIP5K2O43314 1243 aa17.64■□□□□ 0.41
SNRNP200-205ENST00000480835 ECE2O60344 883 aa17.64■□□□□ 0.41
SNRNP200-205ENST00000480835 MCM2P49736 904 aa17.64■□□□□ 0.41
SNRNP200-205ENST00000480835 IMMTQ16891 758 aaKnown RBP17.64■□□□□ 0.41
SNRNP200-205ENST00000480835 KLHL34Q8N239 644 aa17.64■□□□□ 0.41
SNRNP200-205ENST00000480835 NOL10Q9BSC4 688 aaKnown RBP17.64■□□□□ 0.41
SNRNP200-205ENST00000480835 NACAP1Q9BZK3 213 aa17.64■□□□□ 0.41
SNRNP200-205ENST00000480835 ARMT1Q9H993 441 aa17.64■□□□□ 0.41
SNRNP200-205ENST00000480835 ZNF646O15015 1829 aaPredicted RBP17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 SCN9AQ15858 1988 aa17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 FGAP02671 866 aa17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 CYP21A2P08686 494 aa17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 NEK4P51957 841 aa17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 AOC3Q16853 763 aa17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 STRIP1Q5VSL9 837 aa17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 ADGRA1Q86SQ6 560 aa17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 LCORLQ8N3X6 602 aa17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 MIGA1Q8NAN2 632 aa17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 FAM163AQ96GL9 167 aaPredicted RBP17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 JAKMIP1Q96N16 626 aaKnown RBP17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 RIOK1Q9BRS2 568 aaKnown RBP17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 ZSWIM6Q9HCJ5 1215 aa17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 SLC4A4Q9Y6R1 1079 aa17.63■□□□□ 0.41
SNRNP200-205ENST00000480835 BAG3O95817 575 aa17.62■□□□□ 0.41
SNRNP200-205ENST00000480835 APPP05067 770 aa17.62■□□□□ 0.41
SNRNP200-205ENST00000480835 GIMAP6Q6P9H5 292 aa17.62■□□□□ 0.41
SNRNP200-205ENST00000480835 FBXW7Q969H0 707 aa17.62■□□□□ 0.41
SNRNP200-205ENST00000480835 DBNDD1Q9H9R9 158 aa17.62■□□□□ 0.41
SNRNP200-205ENST00000480835 CYP46A1Q9Y6A2 500 aa17.62■□□□□ 0.41
SNRNP200-205ENST00000480835 MROH7-TTC4A0A0A0MT08 1334 aa17.62■□□□□ 0.41
SNRNP200-205ENST00000480835 GSG1L2A8MUP6 293 aa17.61■□□□□ 0.41
SNRNP200-205ENST00000480835 K7ELQ4 463 aaPredicted RBP17.61■□□□□ 0.41
SNRNP200-205ENST00000480835 HMGB1P09429 215 aaKnown RBP17.61■□□□□ 0.41
SNRNP200-205ENST00000480835 CASTP20810 708 aaKnown RBP17.61■□□□□ 0.41
SNRNP200-205ENST00000480835 PPP4CP60510 307 aa17.61■□□□□ 0.41
SNRNP200-205ENST00000480835 IFNL3Q8IZI9 196 aa17.61■□□□□ 0.41
SNRNP200-205ENST00000480835 CRNKL1Q9BZJ0 848 aaKnown RBP17.61■□□□□ 0.41
SNRNP200-205ENST00000480835 NAPBQ9H115 298 aa17.61■□□□□ 0.41
SNRNP200-205ENST00000480835 USP17L3A6NCW0 530 aa17.6■□□□□ 0.41
SNRNP200-205ENST00000480835 USP17L4A6NCW7 530 aa17.6■□□□□ 0.41
SNRNP200-205ENST00000480835 ZNF213O14771 459 aa17.6■□□□□ 0.41
SNRNP200-205ENST00000480835 PLCG2P16885 1265 aa17.6■□□□□ 0.41
SNRNP200-205ENST00000480835 GRIK5Q16478 980 aa17.6■□□□□ 0.41
SNRNP200-205ENST00000480835 ADCK5Q3MIX3 580 aa17.6■□□□□ 0.41
SNRNP200-205ENST00000480835 BLOC1S2Q6QNY1 142 aa17.6■□□□□ 0.41
SNRNP200-205ENST00000480835 RUFY3Q7L099 469 aa17.6■□□□□ 0.41
SNRNP200-205ENST00000480835 USP17L1Q7RTZ2 530 aa17.6■□□□□ 0.41
SNRNP200-205ENST00000480835 LARGE2Q8N3Y3 721 aa17.6■□□□□ 0.41
SNRNP200-205ENST00000480835 UPF3BQ9BZI7 483 aaKnown RBP17.6■□□□□ 0.41
SNRNP200-205ENST00000480835 GAKO14976 1311 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms