RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 AK5Q9Y6K8 562 aa9.12□□□□□ -0.95
CALD1-219ENST00000480638 EIF4EBP3O60516 100 aaPredicted RBP9.11□□□□□ -0.95
CALD1-219ENST00000480638 ALX3O95076 343 aa9.11□□□□□ -0.95
CALD1-219ENST00000480638 IREB2P48200 963 aaKnown RBP9.11□□□□□ -0.95
CALD1-219ENST00000480638 ZNF157P51786 506 aaPredicted RBP9.11□□□□□ -0.95
CALD1-219ENST00000480638 XPCQ01831 940 aaPredicted RBP9.11□□□□□ -0.95
CALD1-219ENST00000480638 KIAA1211Q6ZU35 1233 aa9.11□□□□□ -0.95
CALD1-219ENST00000480638 DDX54Q8TDD1 881 aaKnown RBP9.11□□□□□ -0.95
CALD1-219ENST00000480638 GIPC2Q8TF65 315 aa9.11□□□□□ -0.95
CALD1-219ENST00000480638 FAM161BQ96MY7 647 aa9.11□□□□□ -0.95
CALD1-219ENST00000480638 USP26Q9BXU7 913 aa9.11□□□□□ -0.95
CALD1-219ENST00000480638 PPM1HQ9ULR3 514 aa9.11□□□□□ -0.95
CALD1-219ENST00000480638 LOC100289279A0A1B0GTE1 492 aa9.1□□□□□ -0.95
CALD1-219ENST00000480638 PSMD2Q13200 908 aa9.1□□□□□ -0.95
CALD1-219ENST00000480638 Q6ZS46 218 aa9.1□□□□□ -0.95
CALD1-219ENST00000480638 TMC4Q7Z404 712 aa9.1□□□□□ -0.95
CALD1-219ENST00000480638 TMEM39AQ9NV64 488 aa9.09□□□□□ -0.95
CALD1-219ENST00000480638 CYP11A1P05108 521 aa9.08□□□□□ -0.96
CALD1-219ENST00000480638 TPTE2Q6XPS3 522 aa9.08□□□□□ -0.96
CALD1-219ENST00000480638 ANKRD24Q8TF21 1146 aa9.08□□□□□ -0.96
CALD1-219ENST00000480638 MEGF10Q96KG7 1140 aa9.08□□□□□ -0.96
CALD1-219ENST00000480638 RUSC1Q9BVN2 902 aa9.08□□□□□ -0.96
CALD1-219ENST00000480638 FBXO24O75426 580 aa9.07□□□□□ -0.96
CALD1-219ENST00000480638 ECEL1O95672 775 aa9.07□□□□□ -0.96
CALD1-219ENST00000480638 DLGAP3O95886 979 aa9.07□□□□□ -0.96
CALD1-219ENST00000480638 CTSBP07858 339 aa9.07□□□□□ -0.96
CALD1-219ENST00000480638 MAOBP27338 520 aa9.07□□□□□ -0.96
CALD1-219ENST00000480638 PPP2R3AQ06190 1150 aa9.07□□□□□ -0.96
CALD1-219ENST00000480638 AP3B2Q13367 1082 aa9.07□□□□□ -0.96
CALD1-219ENST00000480638 POU4F3Q15319 338 aa9.07□□□□□ -0.96
CALD1-219ENST00000480638 ZNF326Q5BKZ1 582 aaKnown RBP9.07□□□□□ -0.96
CALD1-219ENST00000480638 NECAB3Q96P71 396 aaPredicted RBP9.07□□□□□ -0.96
CALD1-219ENST00000480638 SSBP4Q9BWG4 385 aaPredicted RBP9.07□□□□□ -0.96
CALD1-219ENST00000480638 RNF208Q9H0X6 261 aa9.07□□□□□ -0.96
CALD1-219ENST00000480638 SORBS3O60504 671 aa9.06□□□□□ -0.96
CALD1-219ENST00000480638 GLB1P16278 677 aa9.06□□□□□ -0.96
CALD1-219ENST00000480638 CORO1BQ9BR76 489 aa9.06□□□□□ -0.96
CALD1-219ENST00000480638 CEP44Q9C0F1 390 aa9.06□□□□□ -0.96
CALD1-219ENST00000480638 TPSG1Q9NRR2 321 aa9.06□□□□□ -0.96
CALD1-219ENST00000480638 TTF2Q9UNY4 1162 aaKnown RBP9.06□□□□□ -0.96
CALD1-219ENST00000480638 MEGF11A6BM72 1044 aa9.05□□□□□ -0.96
CALD1-219ENST00000480638 ENC1O14682 589 aa9.05□□□□□ -0.96
CALD1-219ENST00000480638 ZNF16P17020 682 aaPredicted RBP9.05□□□□□ -0.96
CALD1-219ENST00000480638 DZIP1LQ8IYY4 767 aaKnown RBP9.05□□□□□ -0.96
CALD1-219ENST00000480638 TMPRSS13Q9BYE2 586 aa9.05□□□□□ -0.96
CALD1-219ENST00000480638 MRS2Q9HD23 443 aa9.05□□□□□ -0.96
CALD1-219ENST00000480638 CTSHP09668 335 aa9.04□□□□□ -0.96
CALD1-219ENST00000480638 DOC2BQ14184 412 aa9.04□□□□□ -0.96
CALD1-219ENST00000480638 SULF2Q8IWU5 870 aa9.04□□□□□ -0.96
CALD1-219ENST00000480638 CEP41Q9BYV8 373 aa9.04□□□□□ -0.96
CALD1-219ENST00000480638 VTI1BQ9UEU0 232 aa9.04□□□□□ -0.96
CALD1-219ENST00000480638 CCDC9Q9Y3X0 531 aaKnown RBP9.04□□□□□ -0.96
CALD1-219ENST00000480638 CELA3AP09093 270 aa9.03□□□□□ -0.96
CALD1-219ENST00000480638 MEI1Q5TIA1 1274 aa9.03□□□□□ -0.96
CALD1-219ENST00000480638 ANKRD34AQ69YU3 496 aa9.03□□□□□ -0.96
CALD1-219ENST00000480638 STK35Q8TDR2 534 aa9.03□□□□□ -0.96
CALD1-219ENST00000480638 CRELD1Q96HD1 420 aa9.03□□□□□ -0.96
CALD1-219ENST00000480638 UBL7Q96S82 380 aaPredicted RBP9.03□□□□□ -0.96
CALD1-219ENST00000480638 PAGE1O75459 146 aa9.02□□□□□ -0.97
CALD1-219ENST00000480638 GSTP1P09211 210 aaKnown RBP9.02□□□□□ -0.97
CALD1-219ENST00000480638 NME2P22392 152 aa9.02□□□□□ -0.97
CALD1-219ENST00000480638 EXOSC6Q5RKV6 272 aaKnown RBP9.02□□□□□ -0.97
CALD1-219ENST00000480638 HP1BP3Q5SSJ5 553 aaPredicted RBP9.02□□□□□ -0.97
CALD1-219ENST00000480638 NUTM2GQ5VZR2 741 aa9.02□□□□□ -0.97
CALD1-219ENST00000480638 FDX2Q6P4F2 183 aa9.02□□□□□ -0.97
CALD1-219ENST00000480638 PDZD3Q86UT5 571 aa9.02□□□□□ -0.97
CALD1-219ENST00000480638 RGS22Q8NE09 1264 aa9.02□□□□□ -0.97
CALD1-219ENST00000480638 TP53INP1Q96A56 240 aa9.02□□□□□ -0.97
CALD1-219ENST00000480638 SUGCTQ9HAC7 445 aa9.02□□□□□ -0.97
CALD1-219ENST00000480638 RBM47A0AV96 593 aaKnown RBP9.01□□□□□ -0.97
CALD1-219ENST00000480638 ITGAEP38570 1179 aa9.01□□□□□ -0.97
CALD1-219ENST00000480638 PDE3AQ14432 1141 aa9.01□□□□□ -0.97
CALD1-219ENST00000480638 SV2BQ7L1I2 683 aa9.01□□□□□ -0.97
CALD1-219ENST00000480638 SMG8Q8ND04 991 aaKnown RBP9.01□□□□□ -0.97
CALD1-219ENST00000480638 CYP4F12Q9HCS2 524 aa9.01□□□□□ -0.97
CALD1-219ENST00000480638 TIAF1O95411 115 aa9□□□□□ -0.97
CALD1-219ENST00000480638 ARNTP27540 789 aa9□□□□□ -0.97
CALD1-219ENST00000480638 PREPP48147 710 aa9□□□□□ -0.97
CALD1-219ENST00000480638 ST13P50502 369 aaKnown RBP9□□□□□ -0.97
CALD1-219ENST00000480638 MRPL58Q14197 206 aaKnown RBP9□□□□□ -0.97
CALD1-219ENST00000480638 UVSSAQ2YD98 709 aa9□□□□□ -0.97
CALD1-219ENST00000480638 FAM46AQ96IP4 442 aaKnown RBP9□□□□□ -0.97
CALD1-219ENST00000480638 ZC3H12CQ9C0D7 883 aaKnown RBP9□□□□□ -0.97
CALD1-219ENST00000480638 CCDC86Q9H6F5 360 aaKnown RBP9□□□□□ -0.97
CALD1-219ENST00000480638 CCDC85BQ15834 202 aaPredicted RBP8.99□□□□□ -0.97
CALD1-219ENST00000480638 EMILIN2Q9BXX0 1053 aa8.99□□□□□ -0.97
CALD1-219ENST00000480638 BCL11AQ9H165 835 aa8.99□□□□□ -0.97
CALD1-219ENST00000480638 SAMM50Q9Y512 469 aa8.99□□□□□ -0.97
CALD1-219ENST00000480638 SART1O43290 800 aaKnown RBP8.98□□□□□ -0.97
CALD1-219ENST00000480638 BMP6P22004 513 aa8.98□□□□□ -0.97
CALD1-219ENST00000480638 ZNF252P-AS1Q0IIN9 211 aa8.98□□□□□ -0.97
CALD1-219ENST00000480638 TAF1CQ15572 869 aaPredicted RBP8.98□□□□□ -0.97
CALD1-219ENST00000480638 RSPO4Q2I0M5 234 aaPredicted RBP8.98□□□□□ -0.97
CALD1-219ENST00000480638 NKAPLQ5M9Q1 402 aa8.98□□□□□ -0.97
CALD1-219ENST00000480638 PCNX4Q63HM2 1172 aa8.98□□□□□ -0.97
CALD1-219ENST00000480638 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.98□□□□□ -0.97
CALD1-219ENST00000480638 ARMC10Q8N2F6 343 aa8.98□□□□□ -0.97
CALD1-219ENST00000480638 KCNB2Q92953 911 aa8.98□□□□□ -0.97
CALD1-219ENST00000480638 WDR18Q9BV38 432 aa8.98□□□□□ -0.97
CALD1-219ENST00000480638 KRT82Q9NSB4 513 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms