RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 IGSF3O75054 1194 aa13.56□□□□□ -0.24
CLDN11-205ENST00000480067 LMOD1P29536 600 aaPredicted RBP13.56□□□□□ -0.24
CLDN11-205ENST00000480067 LRRFIP1Q32MZ4 808 aaKnown RBP13.56□□□□□ -0.24
CLDN11-205ENST00000480067 SLC9C2Q5TAH2 1124 aa13.56□□□□□ -0.24
CLDN11-205ENST00000480067 SLF2Q8IX21 1173 aa13.56□□□□□ -0.24
CLDN11-205ENST00000480067 KBTBD3Q8NAB2 608 aa13.56□□□□□ -0.24
CLDN11-205ENST00000480067 FSD1Q9BTV5 496 aa13.56□□□□□ -0.24
CLDN11-205ENST00000480067 SCN9AQ15858 1988 aa13.56□□□□□ -0.24
CLDN11-205ENST00000480067 GSPT1P15170 499 aaKnown RBP13.55□□□□□ -0.24
CLDN11-205ENST00000480067 SCNN1DP51172 638 aa13.55□□□□□ -0.24
CLDN11-205ENST00000480067 GSTO1P78417 241 aa13.55□□□□□ -0.24
CLDN11-205ENST00000480067 MECOMQ03112 1051 aa13.55□□□□□ -0.24
CLDN11-205ENST00000480067 ZSCAN25Q6NSZ9 544 aa13.55□□□□□ -0.24
CLDN11-205ENST00000480067 MICALL2Q8IY33 904 aa13.55□□□□□ -0.24
CLDN11-205ENST00000480067 GPRC5DQ9NZD1 345 aa13.55□□□□□ -0.24
CLDN11-205ENST00000480067 SDSP20132 328 aa13.54□□□□□ -0.24
CLDN11-205ENST00000480067 KCNA4P22459 653 aa13.54□□□□□ -0.24
CLDN11-205ENST00000480067 RBM5P52756 815 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLDN11-205ENST00000480067 BMP2KLQ5H9B9 411 aa13.54□□□□□ -0.24
CLDN11-205ENST00000480067 NAA16Q6N069 864 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-205ENST00000480067 MAGEB6Q8N7X4 407 aa13.54□□□□□ -0.24
CLDN11-205ENST00000480067 TEKT1Q969V4 418 aa13.54□□□□□ -0.24
CLDN11-205ENST00000480067 NSUN4Q96CB9 384 aaKnown RBP13.54□□□□□ -0.24
CLDN11-205ENST00000480067 L3MBTL3Q96JM7 780 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-205ENST00000480067 MRIQ9BWK5 157 aa13.54□□□□□ -0.24
CLDN11-205ENST00000480067 SERPINA10Q9UK55 444 aa13.54□□□□□ -0.24
CLDN11-205ENST00000480067 IQCA1LA6NCM1 817 aa13.54□□□□□ -0.24
CLDN11-205ENST00000480067 LDHCP07864 332 aa13.54□□□□□ -0.24
CLDN11-205ENST00000480067 ZNF280AP59817 542 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-205ENST00000480067 HDLBPQ00341 1268 aaKnown RBP13.54□□□□□ -0.24
CLDN11-205ENST00000480067 MAPK8IP2Q13387 824 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-205ENST00000480067 DIXDC1Q155Q3 683 aa13.54□□□□□ -0.24
CLDN11-205ENST00000480067 RBM26Q5T8P6 1007 aaKnown RBP13.54□□□□□ -0.24
CLDN11-205ENST00000480067 TMED8Q6PL24 325 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-205ENST00000480067 ZNF526Q8TF50 670 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-205ENST00000480067 TIAM2Q8IVF5 1701 aa13.53□□□□□ -0.24
CLDN11-205ENST00000480067 AKAP11Q9UKA4 1901 aa13.53□□□□□ -0.24
CLDN11-205ENST00000480067 ZFYP08048 801 aaPredicted RBP13.53□□□□□ -0.24
CLDN11-205ENST00000480067 PDE6AP16499 860 aa13.53□□□□□ -0.24
CLDN11-205ENST00000480067 CYP7A1P22680 504 aa13.53□□□□□ -0.24
CLDN11-205ENST00000480067 EPS15P42566 896 aa13.53□□□□□ -0.24
CLDN11-205ENST00000480067 CRKP46108 304 aa13.53□□□□□ -0.24
CLDN11-205ENST00000480067 DLGAP5Q15398 846 aa13.53□□□□□ -0.24
CLDN11-205ENST00000480067 HHIPL2Q6UWX4 724 aa13.53□□□□□ -0.24
CLDN11-205ENST00000480067 TICAM2Q86XR7 235 aa13.53□□□□□ -0.24
CLDN11-205ENST00000480067 MYOZ2Q9NPC6 264 aa13.53□□□□□ -0.24
CLDN11-205ENST00000480067 HACL1Q9UJ83 578 aa13.53□□□□□ -0.24
CLDN11-205ENST00000480067 SHTN1A0MZ66 631 aa13.52□□□□□ -0.25
CLDN11-205ENST00000480067 RNF113AO15541 343 aaKnown RBP13.52□□□□□ -0.25
CLDN11-205ENST00000480067 CFAP100Q494V2 611 aa13.52□□□□□ -0.25
CLDN11-205ENST00000480067 SAMD7Q7Z3H4 446 aa13.52□□□□□ -0.25
CLDN11-205ENST00000480067 ZNF384Q8TF68 577 aa13.52□□□□□ -0.25
CLDN11-205ENST00000480067 FAM163AQ96GL9 167 aaPredicted RBP13.52□□□□□ -0.25
CLDN11-205ENST00000480067 ADARB2Q9NS39 739 aaKnown RBP13.52□□□□□ -0.25
CLDN11-205ENST00000480067 ZNF532Q9HCE3 1301 aa13.52□□□□□ -0.25
CLDN11-205ENST00000480067 VEGFAP15692 232 aaPredicted RBP13.51□□□□□ -0.25
CLDN11-205ENST00000480067 ADD2P35612 726 aa13.51□□□□□ -0.25
CLDN11-205ENST00000480067 UBE3CQ15386 1083 aa13.51□□□□□ -0.25
CLDN11-205ENST00000480067 TBC1D10BQ4KMP7 808 aaPredicted RBP13.51□□□□□ -0.25
CLDN11-205ENST00000480067 ZDHHC15Q96MV8 337 aa13.51□□□□□ -0.25
CLDN11-205ENST00000480067 NOL10Q9BSC4 688 aaKnown RBP13.51□□□□□ -0.25
CLDN11-205ENST00000480067 RRAGCQ9HB90 399 aa13.51□□□□□ -0.25
CLDN11-205ENST00000480067 HIP1O00291 1037 aa13.5□□□□□ -0.25
CLDN11-205ENST00000480067 BAG3O95817 575 aa13.5□□□□□ -0.25
CLDN11-205ENST00000480067 YY1P25490 414 aa13.5□□□□□ -0.25
CLDN11-205ENST00000480067 EPHX2P34913 555 aa13.5□□□□□ -0.25
CLDN11-205ENST00000480067 DAGLAQ9Y4D2 1042 aa13.5□□□□□ -0.25
CLDN11-205ENST00000480067 MYH13Q9UKX3 1938 aa13.5□□□□□ -0.25
CLDN11-205ENST00000480067 MROH7-TTC4A0A0A0MT08 1334 aa13.5□□□□□ -0.25
CLDN11-205ENST00000480067 TCRBV5S4A2TA0A5A2 114 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 MYO1BO43795 1136 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 CHGBP05060 677 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 KIF4BQ2VIQ3 1234 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 SLFNL1Q499Z3 407 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 PNMA8AQ86V59 439 aaPredicted RBP13.49□□□□□ -0.25
CLDN11-205ENST00000480067 MIGA1Q8NAN2 632 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 MTMR14Q8NCE2 650 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 PRMT6Q96LA8 375 aaPredicted RBP13.49□□□□□ -0.25
CLDN11-205ENST00000480067 TAF1DQ9H5J8 278 aaPredicted RBP13.49□□□□□ -0.25
CLDN11-205ENST00000480067 DIAPH3Q9NSV4 1193 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 GAKO14976 1311 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 GPR75-ASB3A0A0A6YYF3 556 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 SPDYE2BA6NHP3 402 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 POTECB2RU33 542 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 WNT10BO00744 389 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 EGFRP00533 1210 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 SPDYE6P0CI01 402 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 BTDP43251 543 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 APOBEC3HQ6NTF7 200 aaKnown RBP13.49□□□□□ -0.25
CLDN11-205ENST00000480067 USP50Q70EL3 339 aaPredicted RBP13.49□□□□□ -0.25
CLDN11-205ENST00000480067 ADGRA1Q86SQ6 560 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 APPBP2Q92624 585 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 GPBP1L1Q9HC44 474 aaPredicted RBP13.49□□□□□ -0.25
CLDN11-205ENST00000480067 AATFQ9NY61 560 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLDN11-205ENST00000480067 PCDHAC2Q9Y5I4 1007 aa13.49□□□□□ -0.25
CLDN11-205ENST00000480067 PSME4Q14997 1843 aa13.48□□□□□ -0.25
CLDN11-205ENST00000480067 MAGEB6P1A0A0J9YX57 407 aa13.48□□□□□ -0.25
CLDN11-205ENST00000480067 NBPF9Q3BBW0 867 aa13.48□□□□□ -0.25
CLDN11-205ENST00000480067 CASC1Q6TDU7 716 aa13.48□□□□□ -0.25
CLDN11-205ENST00000480067 CWC27Q6UX04 472 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms