RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TIAM2Q8IVF5 1701 aa13.08□□□□□ -0.32
VTI1A-204ENST00000480057 EP400Q96L91 3159 aa13.07□□□□□ -0.32
VTI1A-204ENST00000480057 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-204ENST00000480057 FRAT2O75474 233 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-204ENST00000480057 CYP7A1P22680 504 aa13.07□□□□□ -0.32
VTI1A-204ENST00000480057 EN1Q05925 392 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-204ENST00000480057 NBR1Q14596 966 aa13.07□□□□□ -0.32
VTI1A-204ENST00000480057 STOX1Q6ZVD7 989 aa13.07□□□□□ -0.32
VTI1A-204ENST00000480057 CCDC125Q86Z20 511 aa13.07□□□□□ -0.32
VTI1A-204ENST00000480057 MASTLQ96GX5 879 aa13.07□□□□□ -0.32
VTI1A-204ENST00000480057 NACAP1Q9BZK3 213 aa13.07□□□□□ -0.32
VTI1A-204ENST00000480057 ANO8Q9HCE9 1232 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-204ENST00000480057 FOXD4L1Q9NU39 408 aa13.07□□□□□ -0.32
VTI1A-204ENST00000480057 RNF216Q9NWF9 866 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-204ENST00000480057 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
VTI1A-204ENST00000480057 COL11A2P13942 1736 aaPredicted RBP13.06□□□□□ -0.32
VTI1A-204ENST00000480057 DDX11L8A8MPP1 907 aa13.06□□□□□ -0.32
VTI1A-204ENST00000480057 MBD4O95243 580 aa13.06□□□□□ -0.32
VTI1A-204ENST00000480057 IL1R1P14778 569 aa13.06□□□□□ -0.32
VTI1A-204ENST00000480057 CPA1P15085 419 aa13.06□□□□□ -0.32
VTI1A-204ENST00000480057 KLRK1P26718 216 aa13.06□□□□□ -0.32
VTI1A-204ENST00000480057 TOB2Q14106 344 aaPredicted RBP13.06□□□□□ -0.32
VTI1A-204ENST00000480057 STYK1Q6J9G0 422 aa13.06□□□□□ -0.32
VTI1A-204ENST00000480057 GIMAP6Q6P9H5 292 aa13.06□□□□□ -0.32
VTI1A-204ENST00000480057 TNPO1Q92973 898 aaKnown RBP13.06□□□□□ -0.32
VTI1A-204ENST00000480057 RAI14Q9P0K7 980 aa13.06□□□□□ -0.32
VTI1A-204ENST00000480057 ABCF2Q9UG63 623 aa13.06□□□□□ -0.32
VTI1A-204ENST00000480057 MAGEB6P1A0A0J9YX57 407 aa13.05□□□□□ -0.32
VTI1A-204ENST00000480057 WTIPA6NIX2 430 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-204ENST00000480057 UFL1O94874 794 aa13.05□□□□□ -0.32
VTI1A-204ENST00000480057 MCM4P33991 863 aa13.05□□□□□ -0.32
VTI1A-204ENST00000480057 EVCP57679 992 aa13.05□□□□□ -0.32
VTI1A-204ENST00000480057 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
VTI1A-204ENST00000480057 NAA16Q6N069 864 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-204ENST00000480057 CERS3Q8IU89 383 aa13.05□□□□□ -0.32
VTI1A-204ENST00000480057 IFNL3Q8IZI9 196 aa13.05□□□□□ -0.32
VTI1A-204ENST00000480057 NCOA7Q8NI08 942 aa13.05□□□□□ -0.32
VTI1A-204ENST00000480057 TBC1D16Q8TBP0 767 aa13.05□□□□□ -0.32
VTI1A-204ENST00000480057 SLC16A10Q8TF71 515 aa13.05□□□□□ -0.32
VTI1A-204ENST00000480057 NSUN4Q96CB9 384 aaKnown RBP13.05□□□□□ -0.32
VTI1A-204ENST00000480057 TMX4Q9H1E5 349 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-204ENST00000480057 TPCN1Q9ULQ1 816 aa13.05□□□□□ -0.32
VTI1A-204ENST00000480057 NSFL1CQ9UNZ2 370 aaKnown RBP13.05□□□□□ -0.32
VTI1A-204ENST00000480057 IQSEC3Q9UPP2 1182 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-204ENST00000480057 GSG1L2A8MUP6 293 aa13.04□□□□□ -0.32
VTI1A-204ENST00000480057 APPP05067 770 aa13.04□□□□□ -0.32
VTI1A-204ENST00000480057 NT5C2P49902 561 aa13.04□□□□□ -0.32
VTI1A-204ENST00000480057 GSTO1P78417 241 aa13.04□□□□□ -0.32
VTI1A-204ENST00000480057 TRDNQ13061 729 aa13.04□□□□□ -0.32
VTI1A-204ENST00000480057 ME3Q16798 604 aa13.04□□□□□ -0.32
VTI1A-204ENST00000480057 TTLL5Q6EMB2 1281 aa13.04□□□□□ -0.32
VTI1A-204ENST00000480057 Q6ZUG5 572 aa13.04□□□□□ -0.32
VTI1A-204ENST00000480057 NOL8Q76FK4 1167 aaKnown RBP13.04□□□□□ -0.32
VTI1A-204ENST00000480057 RALYLQ86SE5 291 aaKnown RBP13.04□□□□□ -0.32
VTI1A-204ENST00000480057 TXNRD3Q86VQ6 643 aa13.04□□□□□ -0.32
VTI1A-204ENST00000480057 MB21D2Q8IYB1 491 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-204ENST00000480057 RIOK1Q9BRS2 568 aaKnown RBP13.04□□□□□ -0.32
VTI1A-204ENST00000480057 NAPBQ9H115 298 aa13.04□□□□□ -0.32
VTI1A-204ENST00000480057 ARMT1Q9H993 441 aa13.04□□□□□ -0.32
VTI1A-204ENST00000480057 CD209Q9NNX6 404 aa13.04□□□□□ -0.32
VTI1A-204ENST00000480057 SMC3Q9UQE7 1217 aa13.04□□□□□ -0.32
VTI1A-204ENST00000480057 BRD1O95696 1058 aa13.03□□□□□ -0.32
VTI1A-204ENST00000480057 PCP11498 1178 aaKnown RBP13.03□□□□□ -0.32
VTI1A-204ENST00000480057 MCM5P33992 734 aa13.03□□□□□ -0.32
VTI1A-204ENST00000480057 LCORLQ8N3X6 602 aa13.03□□□□□ -0.32
VTI1A-204ENST00000480057 TBC1D22AQ8WUA7 517 aa13.03□□□□□ -0.32
VTI1A-204ENST00000480057 ZNF274Q96GC6 653 aaPredicted RBP13.03□□□□□ -0.32
VTI1A-204ENST00000480057 LLPHQ9BRT6 129 aaKnown RBP13.03□□□□□ -0.32
VTI1A-204ENST00000480057 MTA3Q9BTC8 594 aa13.03□□□□□ -0.32
VTI1A-204ENST00000480057 CNNM2Q9H8M5 875 aa13.03□□□□□ -0.32
VTI1A-204ENST00000480057 EPB41L4AQ9HCS5 686 aaPredicted RBP13.03□□□□□ -0.32
VTI1A-204ENST00000480057 SLC4A4Q9Y6R1 1079 aa13.03□□□□□ -0.32
VTI1A-204ENST00000480057 FAM205AQ6ZU69 1335 aa13.03□□□□□ -0.32
VTI1A-204ENST00000480057 WDR33Q9C0J8 1336 aaKnown RBP13.03□□□□□ -0.32
VTI1A-204ENST00000480057 H0YIN7 160 aa13.02□□□□□ -0.33
VTI1A-204ENST00000480057 GOLGA6L22H0YM25 854 aa13.02□□□□□ -0.33
VTI1A-204ENST00000480057 LARGE1O95461 756 aa13.02□□□□□ -0.33
VTI1A-204ENST00000480057 LDHCP07864 332 aa13.02□□□□□ -0.33
VTI1A-204ENST00000480057 MECOMQ03112 1051 aa13.02□□□□□ -0.33
VTI1A-204ENST00000480057 C2CD5Q86YS7 1000 aa13.02□□□□□ -0.33
VTI1A-204ENST00000480057 CCDC83Q8IWF9 413 aa13.02□□□□□ -0.33
VTI1A-204ENST00000480057 MPNDQ8N594 471 aa13.02□□□□□ -0.33
VTI1A-204ENST00000480057 GTF3C6Q969F1 213 aa13.02□□□□□ -0.33
VTI1A-204ENST00000480057 CNKSR1Q969H4 720 aa13.02□□□□□ -0.33
VTI1A-204ENST00000480057 COA1Q9GZY4 146 aa13.02□□□□□ -0.33
VTI1A-204ENST00000480057 RNF41Q9H4P4 317 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-204ENST00000480057 ANAPC4Q9UJX5 808 aa13.02□□□□□ -0.33
VTI1A-204ENST00000480057 SUGT1Q9Y2Z0 365 aa13.02□□□□□ -0.33
VTI1A-204ENST00000480057 A0A0G2JLW4 131 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 PFKFB2O60825 505 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 LDHBP07195 334 aaKnown RBP13.01□□□□□ -0.33
VTI1A-204ENST00000480057 PDCP20941 246 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 TDO2P48775 406 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 FGD1P98174 961 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 CHAF1AQ13111 956 aaPredicted RBP13.01□□□□□ -0.33
VTI1A-204ENST00000480057 GRIPAP1Q4V328 841 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 MSL1Q68DK7 614 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 CC2D2BQ6DHV5 1058 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 ADGRA1Q86SQ6 560 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms