RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 USP2O75604 605 aaPredicted RBP11.04□□□□□ -0.64
DDX56-211ENST00000479602 IL15P40933 162 aaPredicted RBP11.04□□□□□ -0.64
DDX56-211ENST00000479602 HDAC1Q13547 482 aaPredicted RBP11.04□□□□□ -0.64
DDX56-211ENST00000479602 PKN2Q16513 984 aaKnown RBP11.04□□□□□ -0.64
DDX56-211ENST00000479602 HSP90AB4PQ58FF6 505 aa11.04□□□□□ -0.64
DDX56-211ENST00000479602 VGLL2Q8N8G2 317 aa11.04□□□□□ -0.64
DDX56-211ENST00000479602 ZNF594Q96JF6 807 aaPredicted RBP11.04□□□□□ -0.64
DDX56-211ENST00000479602 GPR108Q9NPR9 543 aa11.04□□□□□ -0.64
DDX56-211ENST00000479602 HDAC9Q9UKV0 1011 aa11.04□□□□□ -0.64
DDX56-211ENST00000479602 PPP2R3BQ9Y5P8 575 aa11.04□□□□□ -0.64
DDX56-211ENST00000479602 TESPA1A2RU30 521 aaPredicted RBP11.03□□□□□ -0.64
DDX56-211ENST00000479602 EYA2O00167 538 aa11.03□□□□□ -0.64
DDX56-211ENST00000479602 SRGAP3O43295 1099 aa11.03□□□□□ -0.64
DDX56-211ENST00000479602 IGSF3O75054 1194 aa11.03□□□□□ -0.64
DDX56-211ENST00000479602 INHBEP58166 350 aa11.03□□□□□ -0.64
DDX56-211ENST00000479602 UBE4AQ14139 1066 aa11.03□□□□□ -0.64
DDX56-211ENST00000479602 DLGAP5Q15398 846 aa11.03□□□□□ -0.64
DDX56-211ENST00000479602 LDHAL6AQ6ZMR3 332 aa11.03□□□□□ -0.64
DDX56-211ENST00000479602 ARMC9Q7Z3E5 817 aa11.03□□□□□ -0.64
DDX56-211ENST00000479602 FBXO33Q7Z6M2 555 aa11.03□□□□□ -0.64
DDX56-211ENST00000479602 MRIQ9BWK5 157 aa11.03□□□□□ -0.64
DDX56-211ENST00000479602 PUS3Q9BZE2 481 aaKnown RBP11.03□□□□□ -0.64
DDX56-211ENST00000479602 HPS5Q9UPZ3 1129 aa11.03□□□□□ -0.64
DDX56-211ENST00000479602 SSC5DA1L4H1 1573 aa11.03□□□□□ -0.64
DDX56-211ENST00000479602 SPEF2Q9C093 1822 aa11.02□□□□□ -0.64
DDX56-211ENST00000479602 CENPFP49454 3210 aa11.02□□□□□ -0.64
DDX56-211ENST00000479602 COL1A1P02452 1464 aaPredicted RBP11.02□□□□□ -0.65
DDX56-211ENST00000479602 NF2P35240 595 aa11.02□□□□□ -0.65
DDX56-211ENST00000479602 CFAP100Q494V2 611 aa11.02□□□□□ -0.65
DDX56-211ENST00000479602 ERC1Q8IUD2 1116 aa11.02□□□□□ -0.65
DDX56-211ENST00000479602 SIRT2Q8IXJ6 389 aa11.02□□□□□ -0.65
DDX56-211ENST00000479602 TEPSINQ96N21 525 aa11.02□□□□□ -0.65
DDX56-211ENST00000479602 SERPINA10Q9UK55 444 aa11.02□□□□□ -0.65
DDX56-211ENST00000479602 FZD1Q9UP38 647 aa11.02□□□□□ -0.65
DDX56-211ENST00000479602 BRCA2P51587 3418 aa11.01□□□□□ -0.65
DDX56-211ENST00000479602 PNMA6EA0A0J9YXQ4 647 aa11.01□□□□□ -0.65
DDX56-211ENST00000479602 ZBTB48P10074 688 aaPredicted RBP11.01□□□□□ -0.65
DDX56-211ENST00000479602 GJA5P36382 358 aa11.01□□□□□ -0.65
DDX56-211ENST00000479602 KCNJ4P48050 445 aa11.01□□□□□ -0.65
DDX56-211ENST00000479602 SREBF2Q12772 1141 aa11.01□□□□□ -0.65
DDX56-211ENST00000479602 NBPF12Q5TAG4 269 aaPredicted RBP11.01□□□□□ -0.65
DDX56-211ENST00000479602 ATG9AQ7Z3C6 839 aa11.01□□□□□ -0.65
DDX56-211ENST00000479602 ZNF804AQ7Z570 1209 aa11.01□□□□□ -0.65
DDX56-211ENST00000479602 CLMNQ96JQ2 1002 aa11.01□□□□□ -0.65
DDX56-211ENST00000479602 CRBNQ96SW2 442 aa11.01□□□□□ -0.65
DDX56-211ENST00000479602 ANGEL1Q9UNK9 670 aaKnown RBP11.01□□□□□ -0.65
DDX56-211ENST00000479602 PDS5AQ29RF7 1337 aaKnown RBP11.01□□□□□ -0.65
DDX56-211ENST00000479602 AKAP11Q9UKA4 1901 aa11.01□□□□□ -0.65
DDX56-211ENST00000479602 KIAA0100Q14667 2235 aaKnown RBP11□□□□□ -0.65
DDX56-211ENST00000479602 IGF2BP3O00425 579 aaKnown RBP eCLIP11□□□□□ -0.65
DDX56-211ENST00000479602 RAB11FIP3O75154 756 aa11□□□□□ -0.65
DDX56-211ENST00000479602 PDE8BO95263 885 aa11□□□□□ -0.65
DDX56-211ENST00000479602 ALDH1A1P00352 501 aa11□□□□□ -0.65
DDX56-211ENST00000479602 FGFR2P21802 821 aa11□□□□□ -0.65
DDX56-211ENST00000479602 HIBADHP31937 336 aaKnown RBP11□□□□□ -0.65
DDX56-211ENST00000479602 RASA3Q14644 834 aa11□□□□□ -0.65
DDX56-211ENST00000479602 GRIK5Q16478 980 aa11□□□□□ -0.65
DDX56-211ENST00000479602 SUPT20HL1Q3ZLR7 823 aa11□□□□□ -0.65
DDX56-211ENST00000479602 SPDYE2Q495Y8 402 aa11□□□□□ -0.65
DDX56-211ENST00000479602 IFNL1Q8IU54 200 aa11□□□□□ -0.65
DDX56-211ENST00000479602 FBXW7Q969H0 707 aa11□□□□□ -0.65
DDX56-211ENST00000479602 SLC10A4Q96EP9 437 aa11□□□□□ -0.65
DDX56-211ENST00000479602 MS4A4AQ96JQ5 239 aa11□□□□□ -0.65
DDX56-211ENST00000479602 PTPN18Q99952 460 aa11□□□□□ -0.65
DDX56-211ENST00000479602 DCTPP1Q9H773 170 aa11□□□□□ -0.65
DDX56-211ENST00000479602 MANSC4A6NHS7 340 aaPredicted RBP10.99□□□□□ -0.65
DDX56-211ENST00000479602 PPP1R12BO60237 982 aaPredicted RBP10.99□□□□□ -0.65
DDX56-211ENST00000479602 GYG1P46976 350 aa10.99□□□□□ -0.65
DDX56-211ENST00000479602 HDLBPQ00341 1268 aaKnown RBP10.99□□□□□ -0.65
DDX56-211ENST00000479602 PRKG1Q13976 671 aa10.99□□□□□ -0.65
DDX56-211ENST00000479602 TTLL12Q14166 644 aaPredicted RBP10.99□□□□□ -0.65
DDX56-211ENST00000479602 FBXO46Q6PJ61 603 aaPredicted RBP10.99□□□□□ -0.65
DDX56-211ENST00000479602 SMC5Q8IY18 1101 aa10.99□□□□□ -0.65
DDX56-211ENST00000479602 GCC1Q96CN9 775 aa10.99□□□□□ -0.65
DDX56-211ENST00000479602 WNK4Q96J92 1243 aa10.99□□□□□ -0.65
DDX56-211ENST00000479602 ZNF70Q9UC06 446 aaPredicted RBP10.99□□□□□ -0.65
DDX56-211ENST00000479602 CLRN2A0PK11 232 aa10.98□□□□□ -0.65
DDX56-211ENST00000479602 F8W031 263 aaPredicted RBP10.98□□□□□ -0.65
DDX56-211ENST00000479602 FKTNO75072 461 aa10.98□□□□□ -0.65
DDX56-211ENST00000479602 CAP1Q01518 475 aa10.98□□□□□ -0.65
DDX56-211ENST00000479602 PUM3Q15397 648 aaKnown RBP10.98□□□□□ -0.65
DDX56-211ENST00000479602 LRRC24Q50LG9 513 aa10.98□□□□□ -0.65
DDX56-211ENST00000479602 TAF7LQ5H9L4 462 aa10.98□□□□□ -0.65
DDX56-211ENST00000479602 MFSD14BQ5SR56 506 aa10.98□□□□□ -0.65
DDX56-211ENST00000479602 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.98□□□□□ -0.65
DDX56-211ENST00000479602 CDAN1Q8IWY9 1227 aa10.98□□□□□ -0.65
DDX56-211ENST00000479602 ZNF512BQ96KM6 892 aaPredicted RBP10.98□□□□□ -0.65
DDX56-211ENST00000479602 CNNM1Q9NRU3 951 aa10.98□□□□□ -0.65
DDX56-211ENST00000479602 JAG2Q9Y219 1238 aa10.98□□□□□ -0.65
DDX56-211ENST00000479602 AKAP2Q9Y2D5 859 aa10.98□□□□□ -0.65
DDX56-211ENST00000479602 PCDHB15Q9Y5E8 787 aa10.98□□□□□ -0.65
DDX56-211ENST00000479602 SOX10P56693 466 aa10.97□□□□□ -0.65
DDX56-211ENST00000479602 MKRN3Q13064 507 aaKnown RBP10.97□□□□□ -0.65
DDX56-211ENST00000479602 TMED8Q6PL24 325 aaPredicted RBP10.97□□□□□ -0.65
DDX56-211ENST00000479602 ANKRD13AQ8IZ07 590 aa10.97□□□□□ -0.65
DDX56-211ENST00000479602 EXOC6Q8TAG9 804 aa10.97□□□□□ -0.65
DDX56-211ENST00000479602 LPIN2Q92539 896 aa10.97□□□□□ -0.65
DDX56-211ENST00000479602 KIF1BPQ96EK5 621 aa10.97□□□□□ -0.65
DDX56-211ENST00000479602 TDRD3Q9H7E2 651 aaKnown RBP10.97□□□□□ -0.65
DDX56-211ENST00000479602 TTF2Q9UNY4 1162 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms