RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 PHKA1P46020 1223 aa13.04□□□□□ -0.32
SP140-210ENST00000479539 CRKP46108 304 aa13.04□□□□□ -0.32
SP140-210ENST00000479539 PRAMEF18Q5VWM3 479 aa13.04□□□□□ -0.32
SP140-210ENST00000479539 CCDC102BQ68D86 513 aa13.04□□□□□ -0.32
SP140-210ENST00000479539 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
SP140-210ENST00000479539 DEFB129Q9H1M3 183 aa13.04□□□□□ -0.32
SP140-210ENST00000479539 NOP58Q9Y2X3 529 aaKnown RBP13.04□□□□□ -0.32
SP140-210ENST00000479539 AOX1Q06278 1338 aa13.04□□□□□ -0.32
SP140-210ENST00000479539 RBM5P52756 815 aaKnown RBP eCLIP13.03□□□□□ -0.32
SP140-210ENST00000479539 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
SP140-210ENST00000479539 MVPQ14764 893 aaKnown RBP13.03□□□□□ -0.32
SP140-210ENST00000479539 RGMBQ6NW40 437 aa13.03□□□□□ -0.32
SP140-210ENST00000479539 CEP85Q6P2H3 762 aa13.03□□□□□ -0.32
SP140-210ENST00000479539 XAGE2Q96GT9 111 aa13.03□□□□□ -0.32
SP140-210ENST00000479539 GPR108Q9NPR9 543 aa13.03□□□□□ -0.32
SP140-210ENST00000479539 DENND2AQ9ULE3 1009 aa13.03□□□□□ -0.32
SP140-210ENST00000479539 DDX19BQ9UMR2 479 aa13.03□□□□□ -0.32
SP140-210ENST00000479539 PPP2R3BQ9Y5P8 575 aa13.03□□□□□ -0.32
SP140-210ENST00000479539 PSME4Q14997 1843 aa13.02□□□□□ -0.32
SP140-210ENST00000479539 CLRN2A0PK11 232 aa13.02□□□□□ -0.33
SP140-210ENST00000479539 PDE3AQ14432 1141 aa13.02□□□□□ -0.33
SP140-210ENST00000479539 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
SP140-210ENST00000479539 TEKT1Q969V4 418 aa13.02□□□□□ -0.33
SP140-210ENST00000479539 ZDHHC15Q96MV8 337 aa13.02□□□□□ -0.33
SP140-210ENST00000479539 ZNF70Q9UC06 446 aaPredicted RBP13.02□□□□□ -0.33
SP140-210ENST00000479539 COG6Q9Y2V7 657 aa13.02□□□□□ -0.33
SP140-210ENST00000479539 SALL1Q9NSC2 1324 aa13.02□□□□□ -0.33
SP140-210ENST00000479539 FAM155AB1AL88 458 aaPredicted RBP13.01□□□□□ -0.33
SP140-210ENST00000479539 AOC2O75106 756 aa13.01□□□□□ -0.33
SP140-210ENST00000479539 SURF6O75683 361 aaKnown RBP13.01□□□□□ -0.33
SP140-210ENST00000479539 NF2P35240 595 aa13.01□□□□□ -0.33
SP140-210ENST00000479539 NOGQ13253 232 aa13.01□□□□□ -0.33
SP140-210ENST00000479539 GRM1Q13255 1194 aa13.01□□□□□ -0.33
SP140-210ENST00000479539 APOBEC3HQ6NTF7 200 aaKnown RBP13.01□□□□□ -0.33
SP140-210ENST00000479539 HHIPL2Q6UWX4 724 aa13.01□□□□□ -0.33
SP140-210ENST00000479539 CCDC102AQ96A19 550 aa13.01□□□□□ -0.33
SP140-210ENST00000479539 NEUROD6Q96NK8 337 aa13.01□□□□□ -0.33
SP140-210ENST00000479539 TDRD3Q9H7E2 651 aaKnown RBP13.01□□□□□ -0.33
SP140-210ENST00000479539 ZBTB40Q9NUA8 1239 aa13.01□□□□□ -0.33
SP140-210ENST00000479539 MAST3O60307 1309 aa13.01□□□□□ -0.33
SP140-210ENST00000479539 PDS5AQ29RF7 1337 aaKnown RBP13.01□□□□□ -0.33
SP140-210ENST00000479539 ZNF646O15015 1829 aaPredicted RBP13□□□□□ -0.33
SP140-210ENST00000479539 A0A1B0GUL6 1792 aa13□□□□□ -0.33
SP140-210ENST00000479539 COL1A1P02452 1464 aaPredicted RBP13□□□□□ -0.33
SP140-210ENST00000479539 UBE2Q2LH0YL09 131 aa13□□□□□ -0.33
SP140-210ENST00000479539 ZNF157P51786 506 aaPredicted RBP13□□□□□ -0.33
SP140-210ENST00000479539 RASGRF1Q13972 1273 aa13□□□□□ -0.33
SP140-210ENST00000479539 RASA3Q14644 834 aa13□□□□□ -0.33
SP140-210ENST00000479539 MOB2Q70IA6 237 aa13□□□□□ -0.33
SP140-210ENST00000479539 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
SP140-210ENST00000479539 GOLGA6L2Q8N9W4 650 aaPredicted RBP13□□□□□ -0.33
SP140-210ENST00000479539 CHMP4BQ9H444 224 aaKnown RBP13□□□□□ -0.33
SP140-210ENST00000479539 VEZTQ9HBM0 779 aa13□□□□□ -0.33
SP140-210ENST00000479539 FOXN1O15353 648 aa12.99□□□□□ -0.33
SP140-210ENST00000479539 LDHBP07195 334 aaKnown RBP12.99□□□□□ -0.33
SP140-210ENST00000479539 PRDX5P30044 214 aa12.99□□□□□ -0.33
SP140-210ENST00000479539 OS9Q13438 667 aaPredicted RBP12.99□□□□□ -0.33
SP140-210ENST00000479539 TNFAIP1Q13829 316 aa12.99□□□□□ -0.33
SP140-210ENST00000479539 SUPT20HL1Q3ZLR7 823 aa12.99□□□□□ -0.33
SP140-210ENST00000479539 TNNI3KQ59H18 835 aa12.99□□□□□ -0.33
SP140-210ENST00000479539 LDLRAD1Q5T700 205 aa12.99□□□□□ -0.33
SP140-210ENST00000479539 C20orf194Q5TEA3 1177 aa12.99□□□□□ -0.33
SP140-210ENST00000479539 IFFO2Q5TF58 517 aa12.99□□□□□ -0.33
SP140-210ENST00000479539 ARMC9Q7Z3E5 817 aa12.99□□□□□ -0.33
SP140-210ENST00000479539 AIDAQ96BJ3 306 aa12.99□□□□□ -0.33
SP140-210ENST00000479539 ZIC5Q96T25 663 aa12.99□□□□□ -0.33
SP140-210ENST00000479539 FPGT-TNNI3KV9GXZ4 949 aa12.99□□□□□ -0.33
SP140-210ENST00000479539 SLC10A3P09131 477 aa12.98□□□□□ -0.33
SP140-210ENST00000479539 MAP3K11Q16584 847 aa12.98□□□□□ -0.33
SP140-210ENST00000479539 GORABQ5T7V8 394 aa12.98□□□□□ -0.33
SP140-210ENST00000479539 NBPF12Q5TAG4 269 aaPredicted RBP12.98□□□□□ -0.33
SP140-210ENST00000479539 FKBP1CQ5VVH2 108 aa12.98□□□□□ -0.33
SP140-210ENST00000479539 ZGPATQ8N5A5 531 aaKnown RBP12.98□□□□□ -0.33
SP140-210ENST00000479539 TEPSINQ96N21 525 aa12.98□□□□□ -0.33
SP140-210ENST00000479539 HMG20BQ9P0W2 317 aa12.98□□□□□ -0.33
SP140-210ENST00000479539 PPP1R12BO60237 982 aaPredicted RBP12.97□□□□□ -0.33
SP140-210ENST00000479539 UQCRFS1P1P0C7P4 283 aa12.97□□□□□ -0.33
SP140-210ENST00000479539 ARID4AP29374 1257 aaPredicted RBP12.97□□□□□ -0.33
SP140-210ENST00000479539 CTCFP49711 727 aaPredicted RBP12.97□□□□□ -0.33
SP140-210ENST00000479539 KIF23Q02241 960 aaPredicted RBP12.97□□□□□ -0.33
SP140-210ENST00000479539 TTLL12Q14166 644 aaPredicted RBP12.97□□□□□ -0.33
SP140-210ENST00000479539 DIXDC1Q155Q3 683 aa12.97□□□□□ -0.33
SP140-210ENST00000479539 RASAL3Q86YV0 1011 aa12.97□□□□□ -0.33
SP140-210ENST00000479539 SIRT2Q8IXJ6 389 aa12.97□□□□□ -0.33
SP140-210ENST00000479539 FAM163AQ96GL9 167 aaPredicted RBP12.97□□□□□ -0.33
SP140-210ENST00000479539 DBNDD2Q9BQY9 259 aa12.97□□□□□ -0.33
SP140-210ENST00000479539 DAGLAQ9Y4D2 1042 aa12.97□□□□□ -0.33
SP140-210ENST00000479539 UNCXA6NJT0 531 aa12.96□□□□□ -0.33
SP140-210ENST00000479539 TCP10L2B9ZVM9 353 aa12.96□□□□□ -0.33
SP140-210ENST00000479539 TNNI2P48788 182 aa12.96□□□□□ -0.33
SP140-210ENST00000479539 PRKG1Q13976 671 aa12.96□□□□□ -0.33
SP140-210ENST00000479539 HSP90AB4PQ58FF6 505 aa12.96□□□□□ -0.33
SP140-210ENST00000479539 COL13A1Q5TAT6 717 aaPredicted RBP12.96□□□□□ -0.33
SP140-210ENST00000479539 SPTY2D1Q68D10 685 aaPredicted RBP12.96□□□□□ -0.33
SP140-210ENST00000479539 FAM83AQ86UY5 434 aa12.96□□□□□ -0.33
SP140-210ENST00000479539 ERC1Q8IUD2 1116 aa12.96□□□□□ -0.33
SP140-210ENST00000479539 SPATA5Q8NB90 893 aa12.96□□□□□ -0.33
SP140-210ENST00000479539 EAF2Q96CJ1 260 aaPredicted RBP12.96□□□□□ -0.33
SP140-210ENST00000479539 ZNF512BQ96KM6 892 aaPredicted RBP12.96□□□□□ -0.33
SP140-210ENST00000479539 BEGAINQ9BUH8 593 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms