RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 SPEM2Q0P670 501 aa10.35□□□□□ -0.75
GAPVD1-217ENST00000479511 IFRD2Q12894 506 aaPredicted RBP10.35□□□□□ -0.75
GAPVD1-217ENST00000479511 MPP2Q14168 576 aa10.35□□□□□ -0.75
GAPVD1-217ENST00000479511 DHX32Q7L7V1 743 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-217ENST00000479511 HOMER1Q86YM7 354 aa10.35□□□□□ -0.75
GAPVD1-217ENST00000479511 CRBNQ96SW2 442 aa10.35□□□□□ -0.75
GAPVD1-217ENST00000479511 MUC3BQ9H195 1237 aa10.35□□□□□ -0.75
GAPVD1-217ENST00000479511 MIR1-1HGQ9H1L0 117 aa10.35□□□□□ -0.75
GAPVD1-217ENST00000479511 TMEM39AQ9NV64 488 aa10.35□□□□□ -0.75
GAPVD1-217ENST00000479511 TMEM260Q9NX78 707 aa10.35□□□□□ -0.75
GAPVD1-217ENST00000479511 DNMT3LQ9UJW3 386 aa10.35□□□□□ -0.75
GAPVD1-217ENST00000479511 PDE2AO00408 941 aaPredicted RBP10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 CILPO75339 1184 aa10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 ATP11AP98196 1134 aa10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 CWF19L2Q2TBE0 894 aaKnown RBP10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 TKFCQ3LXA3 575 aa10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 FIGNL1Q6PIW4 674 aa10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 GK5Q6ZS86 529 aa10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 TRIM46Q7Z4K8 759 aa10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 REC114Q7Z4M0 266 aa10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 STK35Q8TDR2 534 aa10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 STAG1Q8WVM7 1258 aa10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 BHMTQ93088 406 aa10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 SLKQ9H2G2 1235 aaPredicted RBP10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 RASSF4Q9H2L5 321 aa10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 ZNRF3Q9ULT6 936 aa10.34□□□□□ -0.75
GAPVD1-217ENST00000479511 UNC13AQ9UPW8 1703 aa10.33□□□□□ -0.76
GAPVD1-217ENST00000479511 J3QW42 95 aa10.33□□□□□ -0.76
GAPVD1-217ENST00000479511 PARNO95453 639 aaKnown RBP10.33□□□□□ -0.76
GAPVD1-217ENST00000479511 ZNF165P49910 485 aa10.33□□□□□ -0.76
GAPVD1-217ENST00000479511 PLEKHG6Q3KR16 790 aa10.33□□□□□ -0.76
GAPVD1-217ENST00000479511 LARP1BQ659C4 914 aaKnown RBP10.33□□□□□ -0.76
GAPVD1-217ENST00000479511 LSRQ86X29 649 aaPredicted RBP10.33□□□□□ -0.76
GAPVD1-217ENST00000479511 OR6P1Q8NGX9 317 aa10.33□□□□□ -0.76
GAPVD1-217ENST00000479511 ZBTB42B2RXF5 422 aa10.32□□□□□ -0.76
GAPVD1-217ENST00000479511 NRLP54845 237 aa10.32□□□□□ -0.76
GAPVD1-217ENST00000479511 MLLT1Q03111 559 aaPredicted RBP10.32□□□□□ -0.76
GAPVD1-217ENST00000479511 LAMC2Q13753 1193 aa10.32□□□□□ -0.76
GAPVD1-217ENST00000479511 SCARF1Q14162 830 aa10.32□□□□□ -0.76
GAPVD1-217ENST00000479511 LBRQ14739 615 aaKnown RBP10.32□□□□□ -0.76
GAPVD1-217ENST00000479511 REXO1Q8N1G1 1221 aaKnown RBP10.32□□□□□ -0.76
GAPVD1-217ENST00000479511 PBX4Q9BYU1 374 aa10.32□□□□□ -0.76
GAPVD1-217ENST00000479511 NDFIP2Q9NV92 336 aa10.32□□□□□ -0.76
GAPVD1-217ENST00000479511 NRG2O14511 850 aaPredicted RBP10.31□□□□□ -0.76
GAPVD1-217ENST00000479511 BNIP3LO60238 219 aa10.31□□□□□ -0.76
GAPVD1-217ENST00000479511 GJB6O95452 261 aa10.31□□□□□ -0.76
GAPVD1-217ENST00000479511 ARSHQ5FYA8 562 aa10.31□□□□□ -0.76
GAPVD1-217ENST00000479511 RIPOR1Q6ZS17 1223 aa10.31□□□□□ -0.76
GAPVD1-217ENST00000479511 GRIN3AQ8TCU5 1115 aa10.31□□□□□ -0.76
GAPVD1-217ENST00000479511 DDX56Q9NY93 547 aaKnown RBP10.31□□□□□ -0.76
GAPVD1-217ENST00000479511 MARK1Q9P0L2 795 aa10.31□□□□□ -0.76
GAPVD1-217ENST00000479511 LOC102724428A0A0B4J2F2 783 aa10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 B2RBV5 119 aa10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 DIAPH1O60610 1272 aaKnown RBP10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 LMNB1P20700 586 aa10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 CASP7P55210 303 aa10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 SIK1P57059 783 aa10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 FXNQ16595 210 aa10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 ADAMTSL4Q6UY14 1074 aa10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 RUFY4Q6ZNE9 571 aa10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 HFE2Q6ZVN8 426 aa10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 C16orf86Q6ZW13 317 aa10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 RBBP8NLQ8NC74 664 aaPredicted RBP10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 POP1Q99575 1024 aaKnown RBP10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 PDZRN3Q9UPQ7 1066 aa10.3□□□□□ -0.76
GAPVD1-217ENST00000479511 CD33P20138 364 aa10.29□□□□□ -0.76
GAPVD1-217ENST00000479511 NME2P22392 152 aa10.29□□□□□ -0.76
GAPVD1-217ENST00000479511 MASP1P48740 699 aa10.29□□□□□ -0.76
GAPVD1-217ENST00000479511 PTPN11Q06124 597 aaPredicted RBP10.29□□□□□ -0.76
GAPVD1-217ENST00000479511 ZNF423Q2M1K9 1284 aa10.29□□□□□ -0.76
GAPVD1-217ENST00000479511 C2orf27AQ580R0 203 aa10.29□□□□□ -0.76
GAPVD1-217ENST00000479511 GAL3ST3Q96A11 431 aa10.29□□□□□ -0.76
GAPVD1-217ENST00000479511 IRF2BPLQ9H1B7 796 aa10.29□□□□□ -0.76
GAPVD1-217ENST00000479511 NUCKS1Q9H1E3 243 aaKnown RBP10.29□□□□□ -0.76
GAPVD1-217ENST00000479511 POLR3KQ9Y2Y1 108 aaPredicted RBP10.29□□□□□ -0.76
GAPVD1-217ENST00000479511 BICRAQ9NZM4 1560 aa10.28□□□□□ -0.76
GAPVD1-217ENST00000479511 PPP2R3AQ06190 1150 aa10.28□□□□□ -0.76
GAPVD1-217ENST00000479511 PPP2R5EQ16537 467 aa10.28□□□□□ -0.76
GAPVD1-217ENST00000479511 MTERF2Q49AM1 385 aa10.28□□□□□ -0.76
GAPVD1-217ENST00000479511 SPATC1Q76KD6 591 aa10.28□□□□□ -0.76
GAPVD1-217ENST00000479511 JMYQ8N9B5 988 aa10.28□□□□□ -0.76
GAPVD1-217ENST00000479511 ABHD17AQ96GS6 310 aa10.28□□□□□ -0.76
GAPVD1-217ENST00000479511 ZFP42Q96MM3 310 aa10.28□□□□□ -0.76
GAPVD1-217ENST00000479511 EFCC1Q9HA90 598 aa10.28□□□□□ -0.76
GAPVD1-217ENST00000479511 PFDN2Q9UHV9 154 aa10.28□□□□□ -0.76
GAPVD1-217ENST00000479511 CYP8B1Q9UNU6 501 aa10.28□□□□□ -0.76
GAPVD1-217ENST00000479511 GPLD1P80108 840 aa10.27□□□□□ -0.77
GAPVD1-217ENST00000479511 PCDH1Q08174 1060 aa10.27□□□□□ -0.77
GAPVD1-217ENST00000479511 SULF2Q8IWU5 870 aa10.27□□□□□ -0.77
GAPVD1-217ENST00000479511 THAP3Q8WTV1 239 aaPredicted RBP10.27□□□□□ -0.77
GAPVD1-217ENST00000479511 FEZ1Q99689 392 aa10.27□□□□□ -0.77
GAPVD1-217ENST00000479511 CLEC4MQ9H2X3 399 aaPredicted RBP10.27□□□□□ -0.77
GAPVD1-217ENST00000479511 ANTXR1Q9H6X2 564 aa10.27□□□□□ -0.77
GAPVD1-217ENST00000479511 EHMT1Q9H9B1 1298 aa10.27□□□□□ -0.77
GAPVD1-217ENST00000479511 SAMM50Q9Y512 469 aa10.27□□□□□ -0.77
GAPVD1-217ENST00000479511 PPME1Q9Y570 386 aa10.27□□□□□ -0.77
GAPVD1-217ENST00000479511 PCDHB14Q9Y5E9 798 aa10.27□□□□□ -0.77
GAPVD1-217ENST00000479511 IMPDH2P12268 514 aa10.26□□□□□ -0.77
GAPVD1-217ENST00000479511 LLGL2Q6P1M3 1020 aa10.26□□□□□ -0.77
GAPVD1-217ENST00000479511 MPRIPQ6WCQ1 1025 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms