RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 ADD2P35612 726 aa16.48■□□□□ 0.23
SMARCAL1-211ENST00000479008 MECOMQ03112 1051 aa16.48■□□□□ 0.23
SMARCAL1-211ENST00000479008 LRRFIP1Q32MZ4 808 aaKnown RBP16.48■□□□□ 0.23
SMARCAL1-211ENST00000479008 SLFNL1Q499Z3 407 aa16.48■□□□□ 0.23
SMARCAL1-211ENST00000479008 SLC9C2Q5TAH2 1124 aa16.48■□□□□ 0.23
SMARCAL1-211ENST00000479008 DIAPH3Q9NSV4 1193 aa16.48■□□□□ 0.23
SMARCAL1-211ENST00000479008 TTF2Q9UNY4 1162 aaKnown RBP16.48■□□□□ 0.23
SMARCAL1-211ENST00000479008 SUGT1Q9Y2Z0 365 aa16.48■□□□□ 0.23
SMARCAL1-211ENST00000479008 ZBTB12Q9Y330 459 aaPredicted RBP16.48■□□□□ 0.23
SMARCAL1-211ENST00000479008 HIP1O00291 1037 aa16.47■□□□□ 0.23
SMARCAL1-211ENST00000479008 ZFYP08048 801 aaPredicted RBP16.47■□□□□ 0.23
SMARCAL1-211ENST00000479008 CHMLP26374 656 aa16.47■□□□□ 0.23
SMARCAL1-211ENST00000479008 NAA16Q6N069 864 aaPredicted RBP16.47■□□□□ 0.23
SMARCAL1-211ENST00000479008 KIAA0825Q8IV33 1275 aa16.47■□□□□ 0.23
SMARCAL1-211ENST00000479008 NSUN4Q96CB9 384 aaKnown RBP16.47■□□□□ 0.23
SMARCAL1-211ENST00000479008 ZNF532Q9HCE3 1301 aa16.46■□□□□ 0.23
SMARCAL1-211ENST00000479008 IGSF3O75054 1194 aa16.46■□□□□ 0.23
SMARCAL1-211ENST00000479008 CYP7A1P22680 504 aa16.46■□□□□ 0.23
SMARCAL1-211ENST00000479008 NMIQ13287 307 aaPredicted RBP16.46■□□□□ 0.23
SMARCAL1-211ENST00000479008 UBE3CQ15386 1083 aa16.46■□□□□ 0.23
SMARCAL1-211ENST00000479008 TICAM2Q86XR7 235 aa16.46■□□□□ 0.23
SMARCAL1-211ENST00000479008 AGBL3Q8NEM8 1001 aa16.46■□□□□ 0.23
SMARCAL1-211ENST00000479008 ZNF384Q8TF68 577 aa16.46■□□□□ 0.23
SMARCAL1-211ENST00000479008 GMLQ99445 158 aa16.46■□□□□ 0.23
SMARCAL1-211ENST00000479008 MAST3O60307 1309 aa16.45■□□□□ 0.22
SMARCAL1-211ENST00000479008 TCRBV5S4A2TA0A5A2 114 aa16.45■□□□□ 0.22
SMARCAL1-211ENST00000479008 SCNN1DP51172 638 aa16.45■□□□□ 0.22
SMARCAL1-211ENST00000479008 GSTO1P78417 241 aa16.45■□□□□ 0.22
SMARCAL1-211ENST00000479008 DIXDC1Q155Q3 683 aa16.45■□□□□ 0.22
SMARCAL1-211ENST00000479008 CASC1Q6TDU7 716 aa16.45■□□□□ 0.22
SMARCAL1-211ENST00000479008 CWC27Q6UX04 472 aaKnown RBP16.45■□□□□ 0.22
SMARCAL1-211ENST00000479008 APPBP2Q92624 585 aa16.45■□□□□ 0.22
SMARCAL1-211ENST00000479008 FAM227BQ96M60 508 aa16.45■□□□□ 0.22
SMARCAL1-211ENST00000479008 ZC3H4Q9UPT8 1303 aaKnown RBP16.45■□□□□ 0.22
SMARCAL1-211ENST00000479008 A0A0D9SFI3 127 aa16.44■□□□□ 0.22
SMARCAL1-211ENST00000479008 LDHCP07864 332 aa16.44■□□□□ 0.22
SMARCAL1-211ENST00000479008 RPS12P25398 132 aaKnown RBP16.44■□□□□ 0.22
SMARCAL1-211ENST00000479008 GMPSP49915 693 aaPredicted RBP16.44■□□□□ 0.22
SMARCAL1-211ENST00000479008 ZMYM1Q5SVZ6 1142 aa16.44■□□□□ 0.22
SMARCAL1-211ENST00000479008 ADGRA1Q86SQ6 560 aa16.44■□□□□ 0.22
SMARCAL1-211ENST00000479008 GPC2Q8N158 579 aa16.44■□□□□ 0.22
SMARCAL1-211ENST00000479008 SEC62Q99442 399 aaKnown RBP16.44■□□□□ 0.22
SMARCAL1-211ENST00000479008 ECM29Q5VYK3 1845 aa16.44■□□□□ 0.22
SMARCAL1-211ENST00000479008 CDK5RAP2Q96SN8 1893 aa16.44■□□□□ 0.22
SMARCAL1-211ENST00000479008 DDNO94850 711 aaPredicted RBP16.43■□□□□ 0.22
SMARCAL1-211ENST00000479008 TMED8Q6PL24 325 aaPredicted RBP16.43■□□□□ 0.22
SMARCAL1-211ENST00000479008 SLF2Q8IX21 1173 aa16.43■□□□□ 0.22
SMARCAL1-211ENST00000479008 RUFY2Q8WXA3 655 aa16.43■□□□□ 0.22
SMARCAL1-211ENST00000479008 HELLSQ9NRZ9 838 aa16.43■□□□□ 0.22
SMARCAL1-211ENST00000479008 HDAC9Q9UKV0 1011 aa16.43■□□□□ 0.22
SMARCAL1-211ENST00000479008 MROH7-TTC4A0A0A0MT08 1334 aa16.43■□□□□ 0.22
SMARCAL1-211ENST00000479008 M0R2C6 588 aa16.42■□□□□ 0.22
SMARCAL1-211ENST00000479008 USP17L8P0C7I0 530 aa16.42■□□□□ 0.22
SMARCAL1-211ENST00000479008 CRKP46108 304 aa16.42■□□□□ 0.22
SMARCAL1-211ENST00000479008 C8orf34Q49A92 452 aa16.42■□□□□ 0.22
SMARCAL1-211ENST00000479008 MIGA1Q8NAN2 632 aa16.42■□□□□ 0.22
SMARCAL1-211ENST00000479008 OSBP2Q969R2 916 aa16.42■□□□□ 0.22
SMARCAL1-211ENST00000479008 TEKT1Q969V4 418 aa16.42■□□□□ 0.22
SMARCAL1-211ENST00000479008 PUS7LQ9H0K6 701 aaKnown RBP16.42■□□□□ 0.22
SMARCAL1-211ENST00000479008 DAGLAQ9Y4D2 1042 aa16.42■□□□□ 0.22
SMARCAL1-211ENST00000479008 GAKO14976 1311 aa16.42■□□□□ 0.22
SMARCAL1-211ENST00000479008 MAGEB6P1A0A0J9YX57 407 aa16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 SHTN1A0MZ66 631 aa16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 RBM5P52756 815 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 HDLBPQ00341 1268 aaKnown RBP16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 MCMDC2Q4G0Z9 681 aa16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 DPY19L2Q6NUT2 758 aa16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 HHIPL2Q6UWX4 724 aa16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 OGFOD1Q8N543 542 aa16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 DPF2Q92785 391 aa16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 FAM163AQ96GL9 167 aaPredicted RBP16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 NOL10Q9BSC4 688 aaKnown RBP16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 ESYT1Q9BSJ8 1104 aa16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 IL25Q9H293 177 aa16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 SERPINA10Q9UK55 444 aa16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 RAD50Q92878 1312 aa16.41■□□□□ 0.22
SMARCAL1-211ENST00000479008 SGSM2O43147 1006 aa16.4■□□□□ 0.22
SMARCAL1-211ENST00000479008 MBD4O95243 580 aa16.4■□□□□ 0.22
SMARCAL1-211ENST00000479008 BTDP43251 543 aa16.4■□□□□ 0.22
SMARCAL1-211ENST00000479008 DYNLL1P63167 89 aaKnown RBP16.4■□□□□ 0.22
SMARCAL1-211ENST00000479008 CFAP100Q494V2 611 aa16.4■□□□□ 0.22
SMARCAL1-211ENST00000479008 MICALL2Q8IY33 904 aa16.4■□□□□ 0.22
SMARCAL1-211ENST00000479008 AIDAQ96BJ3 306 aa16.4■□□□□ 0.22
SMARCAL1-211ENST00000479008 MRIQ9BWK5 157 aa16.4■□□□□ 0.22
SMARCAL1-211ENST00000479008 AATFQ9NY61 560 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMARCAL1-211ENST00000479008 CNOT7Q9UIV1 285 aaKnown RBP16.4■□□□□ 0.22
SMARCAL1-211ENST00000479008 PCDHAC2Q9Y5I4 1007 aa16.4■□□□□ 0.22
SMARCAL1-211ENST00000479008 FOCADQ5VW36 1801 aa16.4■□□□□ 0.22
SMARCAL1-211ENST00000479008 GPR75-ASB3A0A0A6YYF3 556 aa16.39■□□□□ 0.21
SMARCAL1-211ENST00000479008 GPAA1O43292 621 aa16.39■□□□□ 0.21
SMARCAL1-211ENST00000479008 ZNF280AP59817 542 aaPredicted RBP16.39■□□□□ 0.21
SMARCAL1-211ENST00000479008 ZNF589Q86UQ0 364 aaPredicted RBP16.39■□□□□ 0.21
SMARCAL1-211ENST00000479008 LCORLQ8N3X6 602 aa16.39■□□□□ 0.21
SMARCAL1-211ENST00000479008 ARMT1Q9H993 441 aa16.39■□□□□ 0.21
SMARCAL1-211ENST00000479008 GPRC5DQ9NZD1 345 aa16.39■□□□□ 0.21
SMARCAL1-211ENST00000479008 SCN4AP35499 1836 aa16.39■□□□□ 0.21
SMARCAL1-211ENST00000479008 CCDC171Q6TFL3 1326 aa16.39■□□□□ 0.21
SMARCAL1-211ENST00000479008 UTRNP46939 3433 aa16.38■□□□□ 0.21
SMARCAL1-211ENST00000479008 NAV1Q8NEY1 1877 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms