RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 CENPFP49454 3210 aa12.21□□□□□ -0.45
CCM2-210ENST00000478169 GYG1P46976 350 aa12.21□□□□□ -0.45
CCM2-210ENST00000478169 GTF2A2P52657 109 aa12.21□□□□□ -0.45
CCM2-210ENST00000478169 MAP3K9P80192 1104 aa12.21□□□□□ -0.45
CCM2-210ENST00000478169 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.21□□□□□ -0.45
CCM2-210ENST00000478169 TEPSINQ96N21 525 aa12.21□□□□□ -0.45
CCM2-210ENST00000478169 TDRD3Q9H7E2 651 aaKnown RBP12.21□□□□□ -0.45
CCM2-210ENST00000478169 MKI67P46013 3256 aaKnown RBP12.21□□□□□ -0.46
CCM2-210ENST00000478169 CRKP46108 304 aa12.2□□□□□ -0.46
CCM2-210ENST00000478169 HDLBPQ00341 1268 aaKnown RBP12.2□□□□□ -0.46
CCM2-210ENST00000478169 SRCIN1Q9C0H9 1055 aa12.2□□□□□ -0.46
CCM2-210ENST00000478169 ZFYVE28Q9HCC9 887 aa12.2□□□□□ -0.46
CCM2-210ENST00000478169 MROH5Q6ZUA9 1318 aa12.19□□□□□ -0.46
CCM2-210ENST00000478169 TCP10L2B9ZVM9 353 aa12.19□□□□□ -0.46
CCM2-210ENST00000478169 VGLL4Q14135 290 aa12.19□□□□□ -0.46
CCM2-210ENST00000478169 TAF1CQ15572 869 aaPredicted RBP12.19□□□□□ -0.46
CCM2-210ENST00000478169 HABP4Q5JVS0 413 aaKnown RBP12.19□□□□□ -0.46
CCM2-210ENST00000478169 FBXO33Q7Z6M2 555 aa12.19□□□□□ -0.46
CCM2-210ENST00000478169 NBPF11Q86T75 865 aa12.19□□□□□ -0.46
CCM2-210ENST00000478169 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCM2-210ENST00000478169 TBC1D22AQ8WUA7 517 aa12.19□□□□□ -0.46
CCM2-210ENST00000478169 BRI3BPQ8WY22 251 aa12.19□□□□□ -0.46
CCM2-210ENST00000478169 TMEM106CQ9BVX2 250 aa12.19□□□□□ -0.46
CCM2-210ENST00000478169 MRIQ9BWK5 157 aa12.19□□□□□ -0.46
CCM2-210ENST00000478169 TMEM39BQ9GZU3 492 aa12.19□□□□□ -0.46
CCM2-210ENST00000478169 MRS2Q9HD23 443 aa12.19□□□□□ -0.46
CCM2-210ENST00000478169 RIPOR2Q9Y4F9 1068 aa12.19□□□□□ -0.46
CCM2-210ENST00000478169 CSADQ9Y600 493 aa12.19□□□□□ -0.46
CCM2-210ENST00000478169 AK9Q5TCS8 1911 aa12.18□□□□□ -0.46
CCM2-210ENST00000478169 CCL15-CCL14A0A0B4J2E2 113 aa12.18□□□□□ -0.46
CCM2-210ENST00000478169 WDHD1O75717 1129 aaPredicted RBP12.18□□□□□ -0.46
CCM2-210ENST00000478169 EN2P19622 333 aaPredicted RBP12.18□□□□□ -0.46
CCM2-210ENST00000478169 CAP1Q01518 475 aa12.18□□□□□ -0.46
CCM2-210ENST00000478169 CCL15Q16663 113 aa12.18□□□□□ -0.46
CCM2-210ENST00000478169 SLC4A10Q6U841 1118 aa12.18□□□□□ -0.46
CCM2-210ENST00000478169 VPS37DQ86XT2 251 aa12.18□□□□□ -0.46
CCM2-210ENST00000478169 CDAN1Q8IWY9 1227 aa12.18□□□□□ -0.46
CCM2-210ENST00000478169 KAZALD1Q96I82 304 aa12.18□□□□□ -0.46
CCM2-210ENST00000478169 SUCLG2Q96I99 432 aa12.18□□□□□ -0.46
CCM2-210ENST00000478169 ZNF333Q96JL9 665 aa12.18□□□□□ -0.46
CCM2-210ENST00000478169 PUS3Q9BZE2 481 aaKnown RBP12.18□□□□□ -0.46
CCM2-210ENST00000478169 ZCCHC17Q9NP64 241 aaKnown RBP12.18□□□□□ -0.46
CCM2-210ENST00000478169 SALL2Q9Y467 1007 aaPredicted RBP12.18□□□□□ -0.46
CCM2-210ENST00000478169 MYH13Q9UKX3 1938 aa12.17□□□□□ -0.46
CCM2-210ENST00000478169 CEP290O15078 2479 aa12.17□□□□□ -0.46
CCM2-210ENST00000478169 UTYO14607 1347 aa12.17□□□□□ -0.46
CCM2-210ENST00000478169 SPDYE5A6NIY4 337 aa12.17□□□□□ -0.46
CCM2-210ENST00000478169 SLC9C1Q4G0N8 1177 aa12.17□□□□□ -0.46
CCM2-210ENST00000478169 CAVIN4Q5BKX8 364 aa12.17□□□□□ -0.46
CCM2-210ENST00000478169 FAM43AQ8N2R8 423 aa12.17□□□□□ -0.46
CCM2-210ENST00000478169 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
CCM2-210ENST00000478169 TEKT1Q969V4 418 aa12.17□□□□□ -0.46
CCM2-210ENST00000478169 HOOK2Q96ED9 719 aa12.17□□□□□ -0.46
CCM2-210ENST00000478169 TLR2O60603 784 aa12.16□□□□□ -0.46
CCM2-210ENST00000478169 FRAT2O75474 233 aaPredicted RBP12.16□□□□□ -0.46
CCM2-210ENST00000478169 GNRH1P01148 92 aa12.16□□□□□ -0.46
CCM2-210ENST00000478169 NBPF7P0C2Y1 421 aaPredicted RBP12.16□□□□□ -0.46
CCM2-210ENST00000478169 CETPP11597 493 aa12.16□□□□□ -0.46
CCM2-210ENST00000478169 RABL6Q3YEC7 729 aaPredicted RBP12.16□□□□□ -0.46
CCM2-210ENST00000478169 FKBP1CQ5VVH2 108 aa12.16□□□□□ -0.46
CCM2-210ENST00000478169 FAM83AQ86UY5 434 aa12.16□□□□□ -0.46
CCM2-210ENST00000478169 ERO1BQ86YB8 467 aa12.16□□□□□ -0.46
CCM2-210ENST00000478169 OTUD5Q96G74 571 aa12.16□□□□□ -0.46
CCM2-210ENST00000478169 ZDHHC15Q96MV8 337 aa12.16□□□□□ -0.46
CCM2-210ENST00000478169 SPINK5Q9NQ38 1064 aaPredicted RBP12.16□□□□□ -0.46
CCM2-210ENST00000478169 TMOD2Q9NZR1 351 aa12.16□□□□□ -0.46
CCM2-210ENST00000478169 SUGT1Q9Y2Z0 365 aa12.16□□□□□ -0.46
CCM2-210ENST00000478169 PTCH2Q9Y6C5 1203 aa12.16□□□□□ -0.46
CCM2-210ENST00000478169 MAST3O60307 1309 aa12.15□□□□□ -0.46
CCM2-210ENST00000478169 PDE8BO95263 885 aa12.15□□□□□ -0.46
CCM2-210ENST00000478169 CHAF1AQ13111 956 aaPredicted RBP12.15□□□□□ -0.46
CCM2-210ENST00000478169 SNAPC2Q13487 334 aa12.15□□□□□ -0.46
CCM2-210ENST00000478169 KIF22Q14807 665 aa12.15□□□□□ -0.46
CCM2-210ENST00000478169 GRIK5Q16478 980 aa12.15□□□□□ -0.46
CCM2-210ENST00000478169 METTL24Q5JXM2 366 aa12.15□□□□□ -0.46
CCM2-210ENST00000478169 BICC1Q9H694 974 aaKnown RBP12.15□□□□□ -0.46
CCM2-210ENST00000478169 IQSEC3Q9UPP2 1182 aaPredicted RBP12.15□□□□□ -0.46
CCM2-210ENST00000478169 SNCAIPQ9Y6H5 919 aa12.15□□□□□ -0.46
CCM2-210ENST00000478169 KIF16BQ96L93 1317 aa12.14□□□□□ -0.47
CCM2-210ENST00000478169 IRF6O14896 467 aa12.14□□□□□ -0.47
CCM2-210ENST00000478169 PRMT2P55345 433 aa12.14□□□□□ -0.47
CCM2-210ENST00000478169 PPIL2Q13356 520 aa12.14□□□□□ -0.47
CCM2-210ENST00000478169 SLC4A8Q2Y0W8 1093 aa12.14□□□□□ -0.47
CCM2-210ENST00000478169 LRRC24Q50LG9 513 aa12.14□□□□□ -0.47
CCM2-210ENST00000478169 DCAF15Q66K64 600 aa12.14□□□□□ -0.47
CCM2-210ENST00000478169 HHIPL2Q6UWX4 724 aa12.14□□□□□ -0.47
CCM2-210ENST00000478169 VGLL2Q8N8G2 317 aa12.14□□□□□ -0.47
CCM2-210ENST00000478169 WRNIP1Q96S55 665 aa12.14□□□□□ -0.47
CCM2-210ENST00000478169 BRCA2P51587 3418 aa12.14□□□□□ -0.47
CCM2-210ENST00000478169 RPAP1Q9BWH6 1393 aaPredicted RBP12.14□□□□□ -0.47
CCM2-210ENST00000478169 ZSWIM8A7E2V4 1837 aa12.14□□□□□ -0.47
CCM2-210ENST00000478169 BTBD19C9JJ37 291 aa12.13□□□□□ -0.47
CCM2-210ENST00000478169 BCAMP50895 628 aa12.13□□□□□ -0.47
CCM2-210ENST00000478169 CACNB3P54284 484 aa12.13□□□□□ -0.47
CCM2-210ENST00000478169 LACTBP83111 547 aaPredicted RBP12.13□□□□□ -0.47
CCM2-210ENST00000478169 PPATQ06203 517 aa12.13□□□□□ -0.47
CCM2-210ENST00000478169 APOBEC3HQ6NTF7 200 aaKnown RBP12.13□□□□□ -0.47
CCM2-210ENST00000478169 ANKRD44Q8N8A2 993 aa12.13□□□□□ -0.47
CCM2-210ENST00000478169 ZKSCAN4Q969J2 545 aaPredicted RBP12.13□□□□□ -0.47
CCM2-210ENST00000478169 ANP32CO43423 234 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms