RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 RIC3Q7Z5B4 369 aa9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 TDHQ8IZJ6 230 aa9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 PAWRQ96IZ0 340 aaKnown RBP9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 CRISPLD2Q9H0B8 497 aa9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 GREM2Q9H772 168 aa9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 CSADQ9Y600 493 aa9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 ZNF646O15015 1829 aaPredicted RBP9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 MUC3AQ02505 3323 aa9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 MYPNQ86TC9 1320 aa9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 RPTORQ8N122 1335 aa9.53□□□□□ -0.88
SPTLC1-205ENST00000477888 COL9A1P20849 921 aa9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 CTSWP56202 376 aa9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 FKBP1AP62942 108 aaKnown RBP9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 PRKCZQ05513 592 aa9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 SNAPC2Q13487 334 aa9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 TNFAIP1Q13829 316 aa9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 SPDYE2Q495Y8 402 aa9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 FAM109BQ6ICB4 259 aaPredicted RBP9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 ERO1BQ86YB8 467 aa9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 SLAIN1Q8ND83 568 aa9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 MYD88Q99836 296 aa9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 PNNQ9H307 717 aaKnown RBP9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 PAK6Q9NQU5 681 aaPredicted RBP9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 CWC25Q9NXE8 425 aaPredicted RBP9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 ZNF70Q9UC06 446 aaPredicted RBP9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 ZMYND8Q9ULU4 1186 aaPredicted RBP9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 SNCAIPQ9Y6H5 919 aa9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 EYSQ5T1H1 3165 aa9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 ADGRA2Q96PE1 1338 aa9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 IRS2Q9Y4H2 1338 aa9.52□□□□□ -0.89
SPTLC1-205ENST00000477888 MAGEA10P43363 369 aaPredicted RBP9.51□□□□□ -0.89
SPTLC1-205ENST00000477888 DIS3LQ8TF46 1054 aaKnown RBP9.51□□□□□ -0.89
SPTLC1-205ENST00000477888 DEFB118Q96PH6 123 aa9.51□□□□□ -0.89
SPTLC1-205ENST00000477888 TMEM39BQ9GZU3 492 aa9.51□□□□□ -0.89
SPTLC1-205ENST00000477888 ANKRD2Q9GZV1 360 aa9.51□□□□□ -0.89
SPTLC1-205ENST00000477888 GABRQQ9UN88 632 aa9.51□□□□□ -0.89
SPTLC1-205ENST00000477888 MAPK8IP3Q9UPT6 1336 aa9.51□□□□□ -0.89
SPTLC1-205ENST00000477888 IL1R1P14778 569 aa9.5□□□□□ -0.89
SPTLC1-205ENST00000477888 RBM5P52756 815 aaKnown RBP eCLIP9.5□□□□□ -0.89
SPTLC1-205ENST00000477888 PPIL2Q13356 520 aa9.5□□□□□ -0.89
SPTLC1-205ENST00000477888 C15orf52Q6ZUT6 534 aaKnown RBP9.5□□□□□ -0.89
SPTLC1-205ENST00000477888 NECAB2Q7Z6G3 386 aa9.5□□□□□ -0.89
SPTLC1-205ENST00000477888 ANKRD23Q86SG2 305 aa9.5□□□□□ -0.89
SPTLC1-205ENST00000477888 C7orf61Q8IZ16 206 aa9.5□□□□□ -0.89
SPTLC1-205ENST00000477888 PXYLP1Q8TE99 480 aa9.5□□□□□ -0.89
SPTLC1-205ENST00000477888 TDRD3Q9H7E2 651 aaKnown RBP9.5□□□□□ -0.89
SPTLC1-205ENST00000477888 PHAXQ9H814 394 aaKnown RBP9.5□□□□□ -0.89
SPTLC1-205ENST00000477888 PRUNE2Q8WUY3 3088 aa9.5□□□□□ -0.89
SPTLC1-205ENST00000477888 TCP10L2B9ZVM9 353 aa9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 SNAP23O00161 211 aa9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 PDHXO00330 501 aa9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 ADCY3O60266 1144 aa9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 INHAP05111 366 aa9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 BCRP11274 1271 aa9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 SYN1P17600 705 aa9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 TMPOP42166 694 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 FCGRTP55899 365 aa9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 GOLGA2Q08379 1002 aa9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 MOGSQ13724 837 aa9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 DUSP27Q5VZP5 1158 aa9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 SAMD1Q6SPF0 538 aaPredicted RBP9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 ZKSCAN4Q969J2 545 aaPredicted RBP9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 METTL22Q9BUU2 404 aaPredicted RBP9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 UBE2OQ9C0C9 1292 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 TTC28Q96AY4 2481 aa9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 LAMA2P24043 3122 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-205ENST00000477888 ZSWIM8A7E2V4 1837 aa9.48□□□□□ -0.89
SPTLC1-205ENST00000477888 ELNP15502 786 aa9.48□□□□□ -0.89
SPTLC1-205ENST00000477888 IGHMBP2P38935 993 aaKnown RBP9.48□□□□□ -0.89
SPTLC1-205ENST00000477888 FLT3LGP49771 235 aa9.48□□□□□ -0.89
SPTLC1-205ENST00000477888 PPATQ06203 517 aa9.48□□□□□ -0.89
SPTLC1-205ENST00000477888 CHRNDQ07001 517 aa9.48□□□□□ -0.89
SPTLC1-205ENST00000477888 LMOD3Q0VAK6 560 aa9.48□□□□□ -0.89
SPTLC1-205ENST00000477888 DZIP1LQ8IYY4 767 aaKnown RBP9.48□□□□□ -0.89
SPTLC1-205ENST00000477888 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1-205ENST00000477888 SERPINA10Q9UK55 444 aa9.48□□□□□ -0.89
SPTLC1-205ENST00000477888 JAG2Q9Y219 1238 aa9.48□□□□□ -0.89
SPTLC1-205ENST00000477888 FAM205AQ6ZU69 1335 aa9.48□□□□□ -0.89
SPTLC1-205ENST00000477888 IGKV5-2P06315 115 aa9.47□□□□□ -0.89
SPTLC1-205ENST00000477888 PRKCSHP14314 528 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1-205ENST00000477888 KCNJ4P48050 445 aa9.47□□□□□ -0.89
SPTLC1-205ENST00000477888 IRF5Q13568 498 aa9.47□□□□□ -0.89
SPTLC1-205ENST00000477888 ANKLE1Q8NAG6 615 aa9.47□□□□□ -0.89
SPTLC1-205ENST00000477888 WRNIP1Q96S55 665 aa9.47□□□□□ -0.89
SPTLC1-205ENST00000477888 RAPGEFL1Q9UHV5 662 aa9.47□□□□□ -0.89
SPTLC1-205ENST00000477888 KCNH4Q9UQ05 1017 aa9.47□□□□□ -0.89
SPTLC1-205ENST00000477888 TAF5LO75529 589 aa9.46□□□□□ -0.9
SPTLC1-205ENST00000477888 ITGA6P23229 1130 aa9.46□□□□□ -0.9
SPTLC1-205ENST00000477888 TNNI2P48788 182 aa9.46□□□□□ -0.9
SPTLC1-205ENST00000477888 SYMPKQ92797 1274 aaKnown RBP9.46□□□□□ -0.9
SPTLC1-205ENST00000477888 FAM161BQ96MY7 647 aa9.46□□□□□ -0.9
SPTLC1-205ENST00000477888 MPHOSPH8Q99549 860 aa9.46□□□□□ -0.9
SPTLC1-205ENST00000477888 CDX2Q99626 313 aaPredicted RBP9.46□□□□□ -0.9
SPTLC1-205ENST00000477888 NBPF3Q9H094 633 aa9.46□□□□□ -0.9
SPTLC1-205ENST00000477888 TTF2Q9UNY4 1162 aaKnown RBP9.46□□□□□ -0.9
SPTLC1-205ENST00000477888 LAS1LQ9Y4W2 734 aaKnown RBP9.46□□□□□ -0.9
SPTLC1-205ENST00000477888 DLG5Q8TDM6 1919 aa9.46□□□□□ -0.9
SPTLC1-205ENST00000477888 H7C1W4 665 aa9.45□□□□□ -0.9
SPTLC1-205ENST00000477888 CSF1RP07333 972 aa9.45□□□□□ -0.9
SPTLC1-205ENST00000477888 CYP2C8P10632 490 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms