RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 SPDYE6P0CI01 402 aa17.52■□□□□ 0.4
PDE6D-204ENST00000477748 PRAMEF18Q5VWM3 479 aa17.52■□□□□ 0.4
PDE6D-204ENST00000477748 ARMC9Q7Z3E5 817 aa17.52■□□□□ 0.4
PDE6D-204ENST00000477748 C1orf115Q9H7X2 142 aa17.52■□□□□ 0.4
PDE6D-204ENST00000477748 MYH13Q9UKX3 1938 aa17.52■□□□□ 0.4
PDE6D-204ENST00000477748 PDE4DIPQ5VU43 2346 aa17.52■□□□□ 0.39
PDE6D-204ENST00000477748 CFAP100Q494V2 611 aa17.51■□□□□ 0.39
PDE6D-204ENST00000477748 MOB2Q70IA6 237 aa17.51■□□□□ 0.39
PDE6D-204ENST00000477748 CSRNP1Q96S65 589 aa17.51■□□□□ 0.39
PDE6D-204ENST00000477748 DEFB129Q9H1M3 183 aa17.51■□□□□ 0.39
PDE6D-204ENST00000477748 RNF186Q9NXI6 227 aa17.51■□□□□ 0.39
PDE6D-204ENST00000477748 ARAP2Q8WZ64 1704 aa17.5■□□□□ 0.39
PDE6D-204ENST00000477748 UBE2Q2LH0YL09 131 aa17.5■□□□□ 0.39
PDE6D-204ENST00000477748 ATP8B2P98198 1209 aa17.5■□□□□ 0.39
PDE6D-204ENST00000477748 TNRC18O15417 2968 aaPredicted RBP17.49■□□□□ 0.39
PDE6D-204ENST00000477748 RBM5P52756 815 aaKnown RBP eCLIP17.49■□□□□ 0.39
PDE6D-204ENST00000477748 TFCP2Q12800 502 aa17.49■□□□□ 0.39
PDE6D-204ENST00000477748 G3BP1Q13283 466 aaKnown RBP eCLIP17.49■□□□□ 0.39
PDE6D-204ENST00000477748 TBC1D22AQ8WUA7 517 aa17.49■□□□□ 0.39
PDE6D-204ENST00000477748 SERPINA10Q9UK55 444 aa17.49■□□□□ 0.39
PDE6D-204ENST00000477748 TTF2Q9UNY4 1162 aaKnown RBP17.49■□□□□ 0.39
PDE6D-204ENST00000477748 CASP8AP2Q9UKL3 1982 aa17.49■□□□□ 0.39
PDE6D-204ENST00000477748 ECM29Q5VYK3 1845 aa17.49■□□□□ 0.39
PDE6D-204ENST00000477748 TRPA1O75762 1119 aa17.48■□□□□ 0.39
PDE6D-204ENST00000477748 GNL3LQ9NVN8 582 aaKnown RBP17.48■□□□□ 0.39
PDE6D-204ENST00000477748 AKAP2Q9Y2D5 859 aa17.48■□□□□ 0.39
PDE6D-204ENST00000477748 PCDHAC2Q9Y5I4 1007 aa17.48■□□□□ 0.39
PDE6D-204ENST00000477748 ADORA1P30542 326 aa17.47■□□□□ 0.39
PDE6D-204ENST00000477748 TIMM10P62072 90 aa17.47■□□□□ 0.39
PDE6D-204ENST00000477748 TNFAIP1Q13829 316 aa17.47■□□□□ 0.39
PDE6D-204ENST00000477748 POLA2Q14181 598 aa17.47■□□□□ 0.39
PDE6D-204ENST00000477748 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
PDE6D-204ENST00000477748 SUPT20HL1Q3ZLR7 823 aa17.47■□□□□ 0.39
PDE6D-204ENST00000477748 LDLRAD1Q5T700 205 aa17.47■□□□□ 0.39
PDE6D-204ENST00000477748 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.47■□□□□ 0.39
PDE6D-204ENST00000477748 SSH3Q8TE77 659 aa17.47■□□□□ 0.39
PDE6D-204ENST00000477748 PRMT6Q96LA8 375 aaPredicted RBP17.47■□□□□ 0.39
PDE6D-204ENST00000477748 YTHDC1Q96MU7 727 aaKnown RBP17.47■□□□□ 0.39
PDE6D-204ENST00000477748 COG6Q9Y2V7 657 aa17.47■□□□□ 0.39
PDE6D-204ENST00000477748 A0A1B0GUL7 405 aa17.46■□□□□ 0.39
PDE6D-204ENST00000477748 CLRN2A0PK11 232 aa17.46■□□□□ 0.39
PDE6D-204ENST00000477748 UNCXA6NJT0 531 aa17.46■□□□□ 0.39
PDE6D-204ENST00000477748 SREBF2Q12772 1141 aa17.46■□□□□ 0.39
PDE6D-204ENST00000477748 MAP3K11Q16584 847 aa17.46■□□□□ 0.39
PDE6D-204ENST00000477748 MCOLN1Q9GZU1 580 aa17.46■□□□□ 0.39
PDE6D-204ENST00000477748 VEZTQ9HBM0 779 aa17.46■□□□□ 0.39
PDE6D-204ENST00000477748 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
PDE6D-204ENST00000477748 ANGEL1Q9UNK9 670 aaKnown RBP17.46■□□□□ 0.39
PDE6D-204ENST00000477748 AKAP11Q9UKA4 1901 aa17.46■□□□□ 0.39
PDE6D-204ENST00000477748 PPP1R12BO60237 982 aaPredicted RBP17.45■□□□□ 0.38
PDE6D-204ENST00000477748 SURF6O75683 361 aaKnown RBP17.45■□□□□ 0.38
PDE6D-204ENST00000477748 PHKA1P46020 1223 aa17.45■□□□□ 0.38
PDE6D-204ENST00000477748 OS9Q13438 667 aaPredicted RBP17.45■□□□□ 0.38
PDE6D-204ENST00000477748 DGKZQ13574 1117 aa17.45■□□□□ 0.38
PDE6D-204ENST00000477748 GRIK5Q16478 980 aa17.45■□□□□ 0.38
PDE6D-204ENST00000477748 SPDYE2Q495Y8 402 aa17.45■□□□□ 0.38
PDE6D-204ENST00000477748 WDR66Q8TBY9 1149 aa17.45■□□□□ 0.38
PDE6D-204ENST00000477748 NEUROD6Q96NK8 337 aa17.45■□□□□ 0.38
PDE6D-204ENST00000477748 SSC5DA1L4H1 1573 aa17.45■□□□□ 0.38
PDE6D-204ENST00000477748 CRKP46108 304 aa17.44■□□□□ 0.38
PDE6D-204ENST00000477748 TM4SF4P48230 202 aa17.44■□□□□ 0.38
PDE6D-204ENST00000477748 PRKG1Q13976 671 aa17.44■□□□□ 0.38
PDE6D-204ENST00000477748 CCDC102BQ68D86 513 aa17.44■□□□□ 0.38
PDE6D-204ENST00000477748 CEP85Q6P2H3 762 aa17.44■□□□□ 0.38
PDE6D-204ENST00000477748 XAGE2Q96GT9 111 aa17.44■□□□□ 0.38
PDE6D-204ENST00000477748 DENND2AQ9ULE3 1009 aa17.44■□□□□ 0.38
PDE6D-204ENST00000477748 SUGT1Q9Y2Z0 365 aa17.44■□□□□ 0.38
PDE6D-204ENST00000477748 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.44■□□□□ 0.38
PDE6D-204ENST00000477748 SEMA3EO15041 775 aa17.43■□□□□ 0.38
PDE6D-204ENST00000477748 HDLBPQ00341 1268 aaKnown RBP17.43■□□□□ 0.38
PDE6D-204ENST00000477748 RASA3Q14644 834 aa17.43■□□□□ 0.38
PDE6D-204ENST00000477748 CHMP4BQ9H444 224 aaKnown RBP17.43■□□□□ 0.38
PDE6D-204ENST00000477748 MAST3O60307 1309 aa17.43■□□□□ 0.38
PDE6D-204ENST00000477748 ZBTB48P10074 688 aaPredicted RBP17.42■□□□□ 0.38
PDE6D-204ENST00000477748 IREB2P48200 963 aaKnown RBP17.42■□□□□ 0.38
PDE6D-204ENST00000477748 PDE3AQ14432 1141 aa17.42■□□□□ 0.38
PDE6D-204ENST00000477748 GORABQ5T7V8 394 aa17.42■□□□□ 0.38
PDE6D-204ENST00000477748 SPRYD7Q5W111 196 aa17.42■□□□□ 0.38
PDE6D-204ENST00000477748 TEKT1Q969V4 418 aa17.42■□□□□ 0.38
PDE6D-204ENST00000477748 TDRD3Q9H7E2 651 aaKnown RBP17.42■□□□□ 0.38
PDE6D-204ENST00000477748 ZNF70Q9UC06 446 aaPredicted RBP17.42■□□□□ 0.38
PDE6D-204ENST00000477748 AOX1Q06278 1338 aa17.42■□□□□ 0.38
PDE6D-204ENST00000477748 TNNI2P48788 182 aa17.41■□□□□ 0.38
PDE6D-204ENST00000477748 NOM1Q5C9Z4 860 aaKnown RBP17.41■□□□□ 0.38
PDE6D-204ENST00000477748 SLC10A4Q96EP9 437 aa17.41■□□□□ 0.38
PDE6D-204ENST00000477748 NOP58Q9Y2X3 529 aaKnown RBP17.41■□□□□ 0.38
PDE6D-204ENST00000477748 MANSC4A6NHS7 340 aaPredicted RBP17.4■□□□□ 0.38
PDE6D-204ENST00000477748 ALDH1A1P00352 501 aa17.4■□□□□ 0.38
PDE6D-204ENST00000477748 MKRN3Q13064 507 aaKnown RBP17.4■□□□□ 0.38
PDE6D-204ENST00000477748 NBPF12Q5TAG4 269 aaPredicted RBP17.4■□□□□ 0.38
PDE6D-204ENST00000477748 C20orf194Q5TEA3 1177 aa17.4■□□□□ 0.38
PDE6D-204ENST00000477748 CTU1Q7Z7A3 348 aaKnown RBP17.4■□□□□ 0.38
PDE6D-204ENST00000477748 MRIQ9BWK5 157 aa17.4■□□□□ 0.38
PDE6D-204ENST00000477748 CFHR5Q9BXR6 569 aa17.4■□□□□ 0.38
PDE6D-204ENST00000477748 ZBTB40Q9NUA8 1239 aa17.4■□□□□ 0.38
PDE6D-204ENST00000477748 ZBTB22O15209 634 aa17.39■□□□□ 0.37
PDE6D-204ENST00000477748 LDHBP07195 334 aaKnown RBP17.39■□□□□ 0.37
PDE6D-204ENST00000477748 INHBEP58166 350 aa17.39■□□□□ 0.37
PDE6D-204ENST00000477748 RASGRF1Q13972 1273 aa17.39■□□□□ 0.37
PDE6D-204ENST00000477748 TNNI3KQ59H18 835 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms