RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 EYA2O00167 538 aa11.29□□□□□ -0.6
CMC1-209ENST00000477739 FOXN1O15353 648 aa11.29□□□□□ -0.6
CMC1-209ENST00000477739 RAD21O60216 631 aa11.29□□□□□ -0.6
CMC1-209ENST00000477739 FAM193AP78312 1265 aa11.29□□□□□ -0.6
CMC1-209ENST00000477739 BAZ2BQ9UIF8 2168 aaKnown RBP11.29□□□□□ -0.6
CMC1-209ENST00000477739 NUTM2BA6NNL0 878 aaPredicted RBP11.29□□□□□ -0.6
CMC1-209ENST00000477739 NUTM2EB1AL46 878 aaPredicted RBP11.29□□□□□ -0.6
CMC1-209ENST00000477739 TDO2P48775 406 aa11.29□□□□□ -0.6
CMC1-209ENST00000477739 IFIT5Q13325 482 aaKnown RBP11.29□□□□□ -0.6
CMC1-209ENST00000477739 NUTM2AQ8IVF1 878 aaPredicted RBP11.29□□□□□ -0.6
CMC1-209ENST00000477739 HAUS7Q99871 368 aa11.29□□□□□ -0.6
CMC1-209ENST00000477739 CARD6Q9BX69 1037 aa11.29□□□□□ -0.6
CMC1-209ENST00000477739 ZNF202O95125 648 aa11.29□□□□□ -0.6
CMC1-209ENST00000477739 TOP1P11387 765 aaKnown RBP11.29□□□□□ -0.6
CMC1-209ENST00000477739 LRRFIP1Q32MZ4 808 aaKnown RBP11.29□□□□□ -0.6
CMC1-209ENST00000477739 SENP2Q9HC62 589 aa11.29□□□□□ -0.6
CMC1-209ENST00000477739 ZCCHC17Q9NP64 241 aaKnown RBP11.29□□□□□ -0.6
CMC1-209ENST00000477739 LRRC37A3O60309 1634 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 SMTNL1A8MU46 457 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 IFIT3O14879 490 aaKnown RBP11.28□□□□□ -0.6
CMC1-209ENST00000477739 ZSCAN20P17040 1043 aaPredicted RBP11.28□□□□□ -0.6
CMC1-209ENST00000477739 GTF2E1P29083 439 aaPredicted RBP11.28□□□□□ -0.6
CMC1-209ENST00000477739 PDIA3P30101 505 aaKnown RBP11.28□□□□□ -0.6
CMC1-209ENST00000477739 METAP2P50579 478 aaKnown RBP eCLIP11.28□□□□□ -0.6
CMC1-209ENST00000477739 CPLX2Q6PUV4 134 aaKnown RBP11.28□□□□□ -0.6
CMC1-209ENST00000477739 BRINP3Q76B58 766 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 SMYD4Q8IYR2 804 aaPredicted RBP11.28□□□□□ -0.6
CMC1-209ENST00000477739 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 AIDAQ96BJ3 306 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 FUCA2Q9BTY2 467 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 PUS7LQ9H0K6 701 aaKnown RBP11.28□□□□□ -0.6
CMC1-209ENST00000477739 TMEM232C9JQI7 657 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 FGAP02671 866 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 RFX5P48382 616 aaPredicted RBP11.28□□□□□ -0.6
CMC1-209ENST00000477739 FAM160A1Q05DH4 1040 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 MCM6Q14566 821 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 FBXO38Q6PIJ6 1188 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 DNAJC10Q8IXB1 793 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 CCDC191Q8NCU4 936 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 CACNA1FO60840 1977 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 RGPD2P0DJD1 1756 aa11.28□□□□□ -0.6
CMC1-209ENST00000477739 STARD3NLO95772 234 aa11.27□□□□□ -0.6
CMC1-209ENST00000477739 SMAP1Q8IYB5 467 aaPredicted RBP11.27□□□□□ -0.6
CMC1-209ENST00000477739 GOLGA8AA7E2F4 631 aa11.27□□□□□ -0.61
CMC1-209ENST00000477739 TMEM67Q5HYA8 995 aa11.27□□□□□ -0.61
CMC1-209ENST00000477739 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.61
CMC1-209ENST00000477739 PLEKHA4Q9H4M7 779 aa11.27□□□□□ -0.61
CMC1-209ENST00000477739 SLAIN2Q9P270 581 aa11.27□□□□□ -0.61
CMC1-209ENST00000477739 MAST3O60307 1309 aa11.27□□□□□ -0.61
CMC1-209ENST00000477739 AKAP17AQ02040 695 aaKnown RBP11.27□□□□□ -0.61
CMC1-209ENST00000477739 XAGE2Q96GT9 111 aa11.27□□□□□ -0.61
CMC1-209ENST00000477739 WDR17Q8IZU2 1322 aa11.27□□□□□ -0.61
CMC1-209ENST00000477739 ANKRD65E5RJM6 399 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 GPAA1O43292 621 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 CTDNEP1O95476 244 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 KCNQ4P56696 695 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 SMIM5Q71RC9 77 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 NEK11Q8NG66 645 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 IRX2Q9BZI1 471 aaPredicted RBP11.26□□□□□ -0.61
CMC1-209ENST00000477739 ZSCAN16Q9H4T2 348 aaPredicted RBP11.26□□□□□ -0.61
CMC1-209ENST00000477739 TRMT112Q9UI30 125 aaKnown RBP11.26□□□□□ -0.61
CMC1-209ENST00000477739 CHD2O14647 1828 aaKnown RBP11.26□□□□□ -0.61
CMC1-209ENST00000477739 ERVV-2B6SEH9 535 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 H7C1W4 665 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 PFKFB1P16118 471 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 TNNT3P45378 269 aaPredicted RBP11.26□□□□□ -0.61
CMC1-209ENST00000477739 RABL6Q3YEC7 729 aaPredicted RBP11.26□□□□□ -0.61
CMC1-209ENST00000477739 KMT5BQ4FZB7 885 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 DPF2Q92785 391 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 ASAP1Q9ULH1 1129 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 TNS3Q68CZ2 1445 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 RNF113AO15541 343 aaKnown RBP11.26□□□□□ -0.61
CMC1-209ENST00000477739 HMGB1P09429 215 aaKnown RBP11.26□□□□□ -0.61
CMC1-209ENST00000477739 CCT6AP40227 531 aaKnown RBP11.26□□□□□ -0.61
CMC1-209ENST00000477739 TMEM87AQ8NBN3 555 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 DHX58Q96C10 678 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 FANCLQ9NW38 375 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 PRDM4Q9UKN5 801 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 AKAP2Q9Y2D5 859 aa11.26□□□□□ -0.61
CMC1-209ENST00000477739 KIF28PB7ZC32 967 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 SLU7O95391 586 aaKnown RBP11.25□□□□□ -0.61
CMC1-209ENST00000477739 ADAMTS2O95450 1211 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 TFRCP02786 760 aaKnown RBP11.25□□□□□ -0.61
CMC1-209ENST00000477739 FOXO4P98177 505 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 FANCCQ00597 558 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 IL17RAQ96F46 866 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 NAPBQ9H115 298 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
CMC1-209ENST00000477739 CDC25AP30304 524 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 IARSP41252 1262 aaKnown RBP11.25□□□□□ -0.61
CMC1-209ENST00000477739 SRRTQ9BXP5 876 aaKnown RBP11.25□□□□□ -0.61
CMC1-209ENST00000477739 ARMT1Q9H993 441 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 LRP2BPQ9P2M1 347 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 RANBP6O60518 1105 aaKnown RBP11.25□□□□□ -0.61
CMC1-209ENST00000477739 RHOXF2BP0C7M4 288 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 IBSPP21815 317 aaPredicted RBP11.25□□□□□ -0.61
CMC1-209ENST00000477739 TERF1P54274 439 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 ENOX2Q16206 610 aaKnown RBP11.25□□□□□ -0.61
CMC1-209ENST00000477739 VPS37DQ86XT2 251 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms