RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SERPINA10Q9UK55 444 aa21.84■■□□□ 1.09
PTPN7-209ENST00000477554 SUPT16HQ9Y5B9 1047 aaKnown RBP21.84■■□□□ 1.09
PTPN7-209ENST00000477554 FAM155AB1AL88 458 aaPredicted RBP21.83■■□□□ 1.09
PTPN7-209ENST00000477554 UBE2Q2LH0YL09 131 aa21.83■■□□□ 1.09
PTPN7-209ENST00000477554 DIXDC1Q155Q3 683 aa21.83■■□□□ 1.09
PTPN7-209ENST00000477554 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.83■■□□□ 1.09
PTPN7-209ENST00000477554 DEFB129Q9H1M3 183 aa21.83■■□□□ 1.09
PTPN7-209ENST00000477554 ZBTB40Q9NUA8 1239 aa21.83■■□□□ 1.09
PTPN7-209ENST00000477554 ZNF70Q9UC06 446 aaPredicted RBP21.83■■□□□ 1.09
PTPN7-209ENST00000477554 PAPPA2Q9BXP8 1791 aa21.83■■□□□ 1.08
PTPN7-209ENST00000477554 FOXN1O15353 648 aa21.82■■□□□ 1.08
PTPN7-209ENST00000477554 C2orf69Q8N8R5 385 aa21.82■■□□□ 1.08
PTPN7-209ENST00000477554 TLR7Q9NYK1 1049 aaKnown RBP21.82■■□□□ 1.08
PTPN7-209ENST00000477554 EXOC6BQ9Y2D4 811 aa21.82■■□□□ 1.08
PTPN7-209ENST00000477554 MMP14P50281 582 aa21.81■■□□□ 1.08
PTPN7-209ENST00000477554 SPDYE2Q495Y8 402 aa21.81■■□□□ 1.08
PTPN7-209ENST00000477554 APOBEC3HQ6NTF7 200 aaKnown RBP21.81■■□□□ 1.08
PTPN7-209ENST00000477554 APOBEC3FQ8IUX4 373 aaKnown RBP21.81■■□□□ 1.08
PTPN7-209ENST00000477554 TBC1D22AQ8WUA7 517 aa21.81■■□□□ 1.08
PTPN7-209ENST00000477554 NOP58Q9Y2X3 529 aaKnown RBP21.81■■□□□ 1.08
PTPN7-209ENST00000477554 NBPF12Q5TAG4 269 aaPredicted RBP21.8■■□□□ 1.08
PTPN7-209ENST00000477554 DBNDD2Q9BQY9 259 aa21.8■■□□□ 1.08
PTPN7-209ENST00000477554 WBP1LQ9NX94 342 aa21.8■■□□□ 1.08
PTPN7-209ENST00000477554 TCP10L2B9ZVM9 353 aa21.8■■□□□ 1.08
PTPN7-209ENST00000477554 TNNI3KQ59H18 835 aa21.8■■□□□ 1.08
PTPN7-209ENST00000477554 COL13A1Q5TAT6 717 aaPredicted RBP21.8■■□□□ 1.08
PTPN7-209ENST00000477554 RGMBQ6NW40 437 aa21.8■■□□□ 1.08
PTPN7-209ENST00000477554 ZNF384Q8TF68 577 aa21.8■■□□□ 1.08
PTPN7-209ENST00000477554 HHIPL1Q96JK4 782 aa21.8■■□□□ 1.08
PTPN7-209ENST00000477554 AKAP2Q9Y2D5 859 aa21.8■■□□□ 1.08
PTPN7-209ENST00000477554 FPGT-TNNI3KV9GXZ4 949 aa21.8■■□□□ 1.08
PTPN7-209ENST00000477554 OS9Q13438 667 aaPredicted RBP21.79■■□□□ 1.08
PTPN7-209ENST00000477554 RASA3Q14644 834 aa21.79■■□□□ 1.08
PTPN7-209ENST00000477554 TBC1D9Q6ZT07 1266 aa21.79■■□□□ 1.08
PTPN7-209ENST00000477554 WDR66Q8TBY9 1149 aa21.79■■□□□ 1.08
PTPN7-209ENST00000477554 TMEM39BQ9GZU3 492 aa21.79■■□□□ 1.08
PTPN7-209ENST00000477554 HMG20BQ9P0W2 317 aa21.79■■□□□ 1.08
PTPN7-209ENST00000477554 TSKSQ9UJT2 592 aa21.79■■□□□ 1.08
PTPN7-209ENST00000477554 DENND2AQ9ULE3 1009 aa21.79■■□□□ 1.08
PTPN7-209ENST00000477554 AKAP11Q9UKA4 1901 aa21.78■■□□□ 1.08
PTPN7-209ENST00000477554 MCAMP43121 646 aa21.78■■□□□ 1.08
PTPN7-209ENST00000477554 ZNF157P51786 506 aaPredicted RBP21.78■■□□□ 1.08
PTPN7-209ENST00000477554 RRP1P56182 461 aaKnown RBP21.78■■□□□ 1.08
PTPN7-209ENST00000477554 TEKT1Q969V4 418 aa21.78■■□□□ 1.08
PTPN7-209ENST00000477554 EAF2Q96CJ1 260 aaPredicted RBP21.78■■□□□ 1.08
PTPN7-209ENST00000477554 ZDHHC15Q96MV8 337 aa21.78■■□□□ 1.08
PTPN7-209ENST00000477554 TEPSINQ96N21 525 aa21.78■■□□□ 1.08
PTPN7-209ENST00000477554 CCDC8Q9H0W5 538 aaPredicted RBP21.78■■□□□ 1.08
PTPN7-209ENST00000477554 GNL3LQ9NVN8 582 aaKnown RBP21.78■■□□□ 1.08
PTPN7-209ENST00000477554 DDX19BQ9UMR2 479 aa21.78■■□□□ 1.08
PTPN7-209ENST00000477554 DAGLAQ9Y4D2 1042 aa21.78■■□□□ 1.08
PTPN7-209ENST00000477554 MYO5AQ9Y4I1 1855 aaKnown RBP21.78■■□□□ 1.08
PTPN7-209ENST00000477554 ECE1P42892 770 aa21.77■■□□□ 1.08
PTPN7-209ENST00000477554 RASAL3Q86YV0 1011 aa21.77■■□□□ 1.08
PTPN7-209ENST00000477554 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.77■■□□□ 1.08
PTPN7-209ENST00000477554 MYH2Q9UKX2 1941 aa21.77■■□□□ 1.08
PTPN7-209ENST00000477554 APBB1O00213 710 aa21.76■■□□□ 1.07
PTPN7-209ENST00000477554 MYO1BO43795 1136 aa21.76■■□□□ 1.07
PTPN7-209ENST00000477554 MS4A1P11836 297 aa21.76■■□□□ 1.07
PTPN7-209ENST00000477554 TTLL12Q14166 644 aaPredicted RBP21.76■■□□□ 1.07
PTPN7-209ENST00000477554 SNRKQ9NRH2 765 aa21.76■■□□□ 1.07
PTPN7-209ENST00000477554 DBNLQ9UJU6 430 aaKnown RBP21.76■■□□□ 1.07
PTPN7-209ENST00000477554 SALL1Q9NSC2 1324 aa21.76■■□□□ 1.07
PTPN7-209ENST00000477554 OTOFQ9HC10 1997 aa21.75■■□□□ 1.07
PTPN7-209ENST00000477554 LDHBP07195 334 aaKnown RBP21.75■■□□□ 1.07
PTPN7-209ENST00000477554 SLC10A3P09131 477 aa21.75■■□□□ 1.07
PTPN7-209ENST00000477554 ARID4AP29374 1257 aaPredicted RBP21.75■■□□□ 1.07
PTPN7-209ENST00000477554 HDLBPQ00341 1268 aaKnown RBP21.75■■□□□ 1.07
PTPN7-209ENST00000477554 MKRN3Q13064 507 aaKnown RBP21.75■■□□□ 1.07
PTPN7-209ENST00000477554 PDE3AQ14432 1141 aa21.75■■□□□ 1.07
PTPN7-209ENST00000477554 ABCF2Q9UG63 623 aa21.75■■□□□ 1.07
PTPN7-209ENST00000477554 NDUFB9Q9Y6M9 179 aa21.75■■□□□ 1.07
PTPN7-209ENST00000477554 SEMA3EO15041 775 aa21.74■■□□□ 1.07
PTPN7-209ENST00000477554 CLMNQ96JQ2 1002 aa21.74■■□□□ 1.07
PTPN7-209ENST00000477554 IL1RAPL2Q9NP60 686 aa21.74■■□□□ 1.07
PTPN7-209ENST00000477554 ANGEL1Q9UNK9 670 aaKnown RBP21.74■■□□□ 1.07
PTPN7-209ENST00000477554 SUGT1Q9Y2Z0 365 aa21.74■■□□□ 1.07
PTPN7-209ENST00000477554 NFIAQ12857 509 aa21.73■■□□□ 1.07
PTPN7-209ENST00000477554 GORABQ5T7V8 394 aa21.73■■□□□ 1.07
PTPN7-209ENST00000477554 CDC42EP5Q6NZY7 148 aa21.73■■□□□ 1.07
PTPN7-209ENST00000477554 HHIPL2Q6UWX4 724 aa21.73■■□□□ 1.07
PTPN7-209ENST00000477554 SPATA5Q8NB90 893 aa21.73■■□□□ 1.07
PTPN7-209ENST00000477554 BCL11AQ9H165 835 aa21.73■■□□□ 1.07
PTPN7-209ENST00000477554 GPR108Q9NPR9 543 aa21.73■■□□□ 1.07
PTPN7-209ENST00000477554 KIF23Q02241 960 aaPredicted RBP21.72■■□□□ 1.07
PTPN7-209ENST00000477554 ZFPM1Q8IX07 1006 aa21.72■■□□□ 1.07
PTPN7-209ENST00000477554 MRIQ9BWK5 157 aa21.72■■□□□ 1.07
PTPN7-209ENST00000477554 ZBTB22O15209 634 aa21.72■■□□□ 1.07
PTPN7-209ENST00000477554 MAP2K2P36507 400 aa21.72■■□□□ 1.07
PTPN7-209ENST00000477554 FKBP1BP68106 108 aa21.72■■□□□ 1.07
PTPN7-209ENST00000477554 USP2O75604 605 aaPredicted RBP21.71■■□□□ 1.07
PTPN7-209ENST00000477554 SLURP2P0DP57 97 aa21.71■■□□□ 1.07
PTPN7-209ENST00000477554 HSPA8P11142 646 aaKnown RBP21.71■■□□□ 1.07
PTPN7-209ENST00000477554 LBX1P52954 281 aa21.71■■□□□ 1.07
PTPN7-209ENST00000477554 MECOMQ03112 1051 aa21.71■■□□□ 1.07
PTPN7-209ENST00000477554 LDLRAD1Q5T700 205 aa21.71■■□□□ 1.07
PTPN7-209ENST00000477554 PPP2R3BQ9Y5P8 575 aa21.71■■□□□ 1.07
PTPN7-209ENST00000477554 MAST3O60307 1309 aa21.71■■□□□ 1.07
PTPN7-209ENST00000477554 PDS5AQ29RF7 1337 aaKnown RBP21.71■■□□□ 1.07
PTPN7-209ENST00000477554 NF2P35240 595 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms