RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 MAP7Q14244 749 aa6.36□□□□□ -1.39
XRN1-211ENST00000477237 KRTAP9-3Q9BYQ3 159 aa6.36□□□□□ -1.39
XRN1-211ENST00000477237 SOX17Q9H6I2 414 aaPredicted RBP6.36□□□□□ -1.39
XRN1-211ENST00000477237 STIM2Q9P246 746 aa6.36□□□□□ -1.39
XRN1-211ENST00000477237 PRRG2O14669 202 aa6.35□□□□□ -1.39
XRN1-211ENST00000477237 CD8BP10966 210 aa6.35□□□□□ -1.39
XRN1-211ENST00000477237 CDCA8Q53HL2 280 aa6.35□□□□□ -1.39
XRN1-211ENST00000477237 SEZ6L2Q6UXD5 910 aa6.35□□□□□ -1.39
XRN1-211ENST00000477237 FAM84AQ96KN4 292 aa6.35□□□□□ -1.39
XRN1-211ENST00000477237 CALR3Q96L12 384 aaKnown RBP6.35□□□□□ -1.39
XRN1-211ENST00000477237 NRSN2Q9GZP1 204 aa6.35□□□□□ -1.39
XRN1-211ENST00000477237 C1GALT1Q9NS00 363 aa6.35□□□□□ -1.39
XRN1-211ENST00000477237 DYNC1LI2O43237 492 aaPredicted RBP6.34□□□□□ -1.39
XRN1-211ENST00000477237 ESRRAP11474 423 aaPredicted RBP6.34□□□□□ -1.39
XRN1-211ENST00000477237 CFPP27918 469 aa6.34□□□□□ -1.39
XRN1-211ENST00000477237 GSTM4Q03013 218 aa6.34□□□□□ -1.39
XRN1-211ENST00000477237 SWI5Q1ZZU3 235 aa6.34□□□□□ -1.39
XRN1-211ENST00000477237 LRRN4CLQ8ND94 238 aa6.34□□□□□ -1.39
XRN1-211ENST00000477237 CLUAP1Q96AJ1 413 aa6.34□□□□□ -1.39
XRN1-211ENST00000477237 OSMRQ99650 979 aa6.34□□□□□ -1.39
XRN1-211ENST00000477237 ZKSCAN3Q9BRR0 538 aa6.34□□□□□ -1.39
XRN1-211ENST00000477237 ACSS3Q9H6R3 686 aa6.34□□□□□ -1.39
XRN1-211ENST00000477237 FAM105AQ9NUU6 356 aa6.34□□□□□ -1.39
XRN1-211ENST00000477237 NOVA2Q9UNW9 492 aaKnown RBP6.34□□□□□ -1.39
XRN1-211ENST00000477237 ACIN1Q9UKV3 1341 aaKnown RBP6.33□□□□□ -1.4
XRN1-211ENST00000477237 OGFOD3Q6PK18 319 aa6.33□□□□□ -1.4
XRN1-211ENST00000477237 XKR5Q6UX68 686 aa6.33□□□□□ -1.4
XRN1-211ENST00000477237 LCNL1Q6ZST4 164 aa6.33□□□□□ -1.4
XRN1-211ENST00000477237 ATCAYQ86WG3 371 aa6.33□□□□□ -1.4
XRN1-211ENST00000477237 PROSER2Q86WR7 435 aaPredicted RBP6.33□□□□□ -1.4
XRN1-211ENST00000477237 C1QL4Q86Z23 238 aa6.33□□□□□ -1.4
XRN1-211ENST00000477237 MISP3Q96FF7 219 aa6.33□□□□□ -1.4
XRN1-211ENST00000477237 CHRDQ9H2X0 955 aa6.33□□□□□ -1.4
XRN1-211ENST00000477237 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.33□□□□□ -1.4
XRN1-211ENST00000477237 CTSBP07858 339 aa6.32□□□□□ -1.4
XRN1-211ENST00000477237 RFX1P22670 979 aa6.32□□□□□ -1.4
XRN1-211ENST00000477237 CD96P40200 585 aa6.32□□□□□ -1.4
XRN1-211ENST00000477237 FAM69CQ0P6D2 419 aa6.32□□□□□ -1.4
XRN1-211ENST00000477237 DYMQ7RTS9 669 aa6.32□□□□□ -1.4
XRN1-211ENST00000477237 PLD6Q8N2A8 252 aaKnown RBP6.32□□□□□ -1.4
XRN1-211ENST00000477237 ABTB2Q8N961 1025 aa6.32□□□□□ -1.4
XRN1-211ENST00000477237 BHLHE22Q8NFJ8 381 aaPredicted RBP6.32□□□□□ -1.4
XRN1-211ENST00000477237 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.31□□□□□ -1.4
XRN1-211ENST00000477237 A6NHS1 94 aa6.31□□□□□ -1.4
XRN1-211ENST00000477237 LRRC10BA6NIK2 292 aa6.31□□□□□ -1.4
XRN1-211ENST00000477237 B8ZZF3 427 aa6.31□□□□□ -1.4
XRN1-211ENST00000477237 BUD31P41223 144 aaPredicted RBP6.31□□□□□ -1.4
XRN1-211ENST00000477237 CFAP70Q5T0N1 1121 aa6.31□□□□□ -1.4
XRN1-211ENST00000477237 ASAP3Q8TDY4 903 aa6.31□□□□□ -1.4
XRN1-211ENST00000477237 TOX2Q96NM4 488 aa6.31□□□□□ -1.4
XRN1-211ENST00000477237 GGNBP2Q9H3C7 697 aa6.31□□□□□ -1.4
XRN1-211ENST00000477237 LGR6Q9HBX8 967 aa6.31□□□□□ -1.4
XRN1-211ENST00000477237 RAP1GAPP47736 663 aa6.3□□□□□ -1.4
XRN1-211ENST00000477237 FAM181AQ8N9Y4 354 aa6.3□□□□□ -1.4
XRN1-211ENST00000477237 PI4K2BQ8TCG2 481 aa6.3□□□□□ -1.4
XRN1-211ENST00000477237 CXXC1Q9P0U4 656 aaPredicted RBP6.3□□□□□ -1.4
XRN1-211ENST00000477237 AKAP4Q5JQC9 854 aa6.29□□□□□ -1.4
XRN1-211ENST00000477237 NETO1Q8TDF5 533 aa6.29□□□□□ -1.4
XRN1-211ENST00000477237 PMEPA1Q969W9 287 aa6.29□□□□□ -1.4
XRN1-211ENST00000477237 BHLHE41Q9C0J9 482 aaPredicted RBP6.29□□□□□ -1.4
XRN1-211ENST00000477237 GSX1Q9H4S2 264 aaPredicted RBP6.29□□□□□ -1.4
XRN1-211ENST00000477237 ZMIZ1Q9ULJ6 1067 aa6.29□□□□□ -1.4
XRN1-211ENST00000477237 DAGLAQ9Y4D2 1042 aa6.29□□□□□ -1.4
XRN1-211ENST00000477237 U3KQE9 123 aa6.29□□□□□ -1.4
XRN1-211ENST00000477237 ZNF503-AS2A6NEH8 195 aa6.28□□□□□ -1.4
XRN1-211ENST00000477237 EREGO14944 169 aa6.28□□□□□ -1.4
XRN1-211ENST00000477237 MAOBP27338 520 aa6.28□□□□□ -1.4
XRN1-211ENST00000477237 ASPAP45381 313 aa6.28□□□□□ -1.4
XRN1-211ENST00000477237 MLANAQ16655 118 aa6.28□□□□□ -1.4
XRN1-211ENST00000477237 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
XRN1-211ENST00000477237 LRRC56Q8IYG6 542 aaPredicted RBP6.28□□□□□ -1.4
XRN1-211ENST00000477237 EDEM1Q92611 657 aa6.28□□□□□ -1.4
XRN1-211ENST00000477237 VAV3Q9UKW4 847 aa6.28□□□□□ -1.4
XRN1-211ENST00000477237 RPLP1P05386 114 aaKnown RBP6.27□□□□□ -1.41
XRN1-211ENST00000477237 PRKCQQ04759 706 aa6.27□□□□□ -1.41
XRN1-211ENST00000477237 CYP27C1Q4G0S4 372 aa6.27□□□□□ -1.41
XRN1-211ENST00000477237 ZSCAN18Q8TBC5 510 aaPredicted RBP6.27□□□□□ -1.41
XRN1-211ENST00000477237 LMCD1Q9NZU5 365 aa6.27□□□□□ -1.41
XRN1-211ENST00000477237 AP4E1Q9UPM8 1137 aa6.27□□□□□ -1.41
XRN1-211ENST00000477237 METTL12A8MUP2 240 aa6.26□□□□□ -1.41
XRN1-211ENST00000477237 TSPAN15O95858 294 aa6.26□□□□□ -1.41
XRN1-211ENST00000477237 ZSCAN22P10073 491 aaPredicted RBP6.26□□□□□ -1.41
XRN1-211ENST00000477237 C8orf34Q49A92 452 aa6.26□□□□□ -1.41
XRN1-211ENST00000477237 TPRNQ4KMQ1 711 aa6.26□□□□□ -1.41
XRN1-211ENST00000477237 TTLL10Q6ZVT0 673 aa6.26□□□□□ -1.41
XRN1-211ENST00000477237 ZSWIM9Q86XI8 627 aa6.26□□□□□ -1.41
XRN1-211ENST00000477237 SIAH1Q8IUQ4 282 aa6.26□□□□□ -1.41
XRN1-211ENST00000477237 STK32AQ8WU08 396 aa6.26□□□□□ -1.41
XRN1-211ENST00000477237 RAD18Q9NS91 495 aa6.26□□□□□ -1.41
XRN1-211ENST00000477237 CRIM1Q9NZV1 1036 aa6.26□□□□□ -1.41
XRN1-211ENST00000477237 ECEL1O95672 775 aa6.25□□□□□ -1.41
XRN1-211ENST00000477237 DNM1Q05193 864 aaKnown RBP6.25□□□□□ -1.41
XRN1-211ENST00000477237 POU4F3Q15319 338 aa6.25□□□□□ -1.41
XRN1-211ENST00000477237 ECM1Q16610 540 aa6.25□□□□□ -1.41
XRN1-211ENST00000477237 FLAD1Q8NFF5 587 aa6.25□□□□□ -1.41
XRN1-211ENST00000477237 LATS2Q9NRM7 1088 aa6.25□□□□□ -1.41
XRN1-211ENST00000477237 FAM53CQ9NYF3 392 aa6.25□□□□□ -1.41
XRN1-211ENST00000477237 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.24□□□□□ -1.41
XRN1-211ENST00000477237 EIF4EBP3O60516 100 aaPredicted RBP6.24□□□□□ -1.41
XRN1-211ENST00000477237 SLC24A1O60721 1099 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms