RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 ZGPATQ8N5A5 531 aaKnown RBP16.54■□□□□ 0.24
ACTN4-205ENST00000477174 TEKT1Q969V4 418 aa16.54■□□□□ 0.24
ACTN4-205ENST00000477174 GBA2Q9HCG7 927 aaPredicted RBP16.54■□□□□ 0.24
ACTN4-205ENST00000477174 PCDHAC2Q9Y5I4 1007 aa16.54■□□□□ 0.24
ACTN4-205ENST00000477174 ZNF646O15015 1829 aaPredicted RBP16.54■□□□□ 0.24
ACTN4-205ENST00000477174 ECE1P42892 770 aa16.53■□□□□ 0.24
ACTN4-205ENST00000477174 FKBP1BP68106 108 aa16.53■□□□□ 0.24
ACTN4-205ENST00000477174 ZDHHC15Q96MV8 337 aa16.53■□□□□ 0.24
ACTN4-205ENST00000477174 DEFB129Q9H1M3 183 aa16.53■□□□□ 0.24
ACTN4-205ENST00000477174 PCNTO95613 3336 aa16.52■□□□□ 0.24
ACTN4-205ENST00000477174 LDHBP07195 334 aaKnown RBP16.52■□□□□ 0.24
ACTN4-205ENST00000477174 UQCRFS1P1P0C7P4 283 aa16.52■□□□□ 0.24
ACTN4-205ENST00000477174 RRP1P56182 461 aaKnown RBP16.52■□□□□ 0.24
ACTN4-205ENST00000477174 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.24
ACTN4-205ENST00000477174 SPTY2D1Q68D10 685 aaPredicted RBP16.52■□□□□ 0.24
ACTN4-205ENST00000477174 SCAF8Q9UPN6 1271 aaKnown RBP16.52■□□□□ 0.24
ACTN4-205ENST00000477174 EXOC6BQ9Y2D4 811 aa16.52■□□□□ 0.24
ACTN4-205ENST00000477174 PPP2R3BQ9Y5P8 575 aa16.52■□□□□ 0.24
ACTN4-205ENST00000477174 ARID4AP29374 1257 aaPredicted RBP16.51■□□□□ 0.23
ACTN4-205ENST00000477174 NF2P35240 595 aa16.51■□□□□ 0.23
ACTN4-205ENST00000477174 HUNKP57058 714 aa16.51■□□□□ 0.23
ACTN4-205ENST00000477174 TNFAIP1Q13829 316 aa16.51■□□□□ 0.23
ACTN4-205ENST00000477174 SPDYE2Q495Y8 402 aa16.51■□□□□ 0.23
ACTN4-205ENST00000477174 PRAMEF18Q5VWM3 479 aa16.51■□□□□ 0.23
ACTN4-205ENST00000477174 ZNF512BQ96KM6 892 aaPredicted RBP16.51■□□□□ 0.23
ACTN4-205ENST00000477174 TDRD3Q9H7E2 651 aaKnown RBP16.51■□□□□ 0.23
ACTN4-205ENST00000477174 ZNF70Q9UC06 446 aaPredicted RBP16.51■□□□□ 0.23
ACTN4-205ENST00000477174 POLR2AP24928 1970 aaKnown RBP16.51■□□□□ 0.23
ACTN4-205ENST00000477174 WDR33Q9C0J8 1336 aaKnown RBP16.5■□□□□ 0.23
ACTN4-205ENST00000477174 CLRN2A0PK11 232 aa16.5■□□□□ 0.23
ACTN4-205ENST00000477174 RAB11FIP3O75154 756 aa16.5■□□□□ 0.23
ACTN4-205ENST00000477174 PRDX5P30044 214 aa16.5■□□□□ 0.23
ACTN4-205ENST00000477174 APOBEC3HQ6NTF7 200 aaKnown RBP16.5■□□□□ 0.23
ACTN4-205ENST00000477174 SPATA5Q8NB90 893 aa16.5■□□□□ 0.23
ACTN4-205ENST00000477174 EAF2Q96CJ1 260 aaPredicted RBP16.5■□□□□ 0.23
ACTN4-205ENST00000477174 CAPNS2Q96L46 248 aa16.5■□□□□ 0.23
ACTN4-205ENST00000477174 VEZTQ9HBM0 779 aa16.5■□□□□ 0.23
ACTN4-205ENST00000477174 HMG20BQ9P0W2 317 aa16.5■□□□□ 0.23
ACTN4-205ENST00000477174 COL1A1P02452 1464 aaPredicted RBP16.49■□□□□ 0.23
ACTN4-205ENST00000477174 SUPT20HL1Q3ZLR7 823 aa16.49■□□□□ 0.23
ACTN4-205ENST00000477174 FKBP1CQ5VVH2 108 aa16.49■□□□□ 0.23
ACTN4-205ENST00000477174 PAXIP1Q6ZW49 1069 aaPredicted RBP16.49■□□□□ 0.23
ACTN4-205ENST00000477174 SLF2Q8IX21 1173 aa16.49■□□□□ 0.23
ACTN4-205ENST00000477174 RHPN1Q8TCX5 695 aa16.49■□□□□ 0.23
ACTN4-205ENST00000477174 KIF1BPQ96EK5 621 aa16.49■□□□□ 0.23
ACTN4-205ENST00000477174 DBNDD2Q9BQY9 259 aa16.49■□□□□ 0.23
ACTN4-205ENST00000477174 ABCF2Q9UG63 623 aa16.49■□□□□ 0.23
ACTN4-205ENST00000477174 AOX1Q06278 1338 aa16.48■□□□□ 0.23
ACTN4-205ENST00000477174 MAP2K2P36507 400 aa16.48■□□□□ 0.23
ACTN4-205ENST00000477174 RASA3Q14644 834 aa16.48■□□□□ 0.23
ACTN4-205ENST00000477174 TTC39AQ5SRH9 613 aa16.48■□□□□ 0.23
ACTN4-205ENST00000477174 CYP4F22Q6NT55 531 aa16.48■□□□□ 0.23
ACTN4-205ENST00000477174 RGMBQ6NW40 437 aa16.48■□□□□ 0.23
ACTN4-205ENST00000477174 CCDC102AQ96A19 550 aa16.48■□□□□ 0.23
ACTN4-205ENST00000477174 FAM163AQ96GL9 167 aaPredicted RBP16.48■□□□□ 0.23
ACTN4-205ENST00000477174 DBNLQ9UJU6 430 aaKnown RBP16.48■□□□□ 0.23
ACTN4-205ENST00000477174 TRPM7Q96QT4 1865 aa16.48■□□□□ 0.23
ACTN4-205ENST00000477174 MCAMP43121 646 aa16.47■□□□□ 0.23
ACTN4-205ENST00000477174 TNNI2P48788 182 aa16.47■□□□□ 0.23
ACTN4-205ENST00000477174 ERICH6Q7L0X2 663 aa16.47■□□□□ 0.23
ACTN4-205ENST00000477174 CLASRPQ8N2M8 674 aaKnown RBP16.47■□□□□ 0.23
ACTN4-205ENST00000477174 CCDC8Q9H0W5 538 aaPredicted RBP16.47■□□□□ 0.23
ACTN4-205ENST00000477174 TMOD2Q9NZR1 351 aa16.47■□□□□ 0.23
ACTN4-205ENST00000477174 IGSF3O75054 1194 aa16.46■□□□□ 0.23
ACTN4-205ENST00000477174 MAP2K1Q02750 393 aaPredicted RBP16.46■□□□□ 0.23
ACTN4-205ENST00000477174 DIXDC1Q155Q3 683 aa16.46■□□□□ 0.23
ACTN4-205ENST00000477174 PI16Q6UXB8 463 aa16.46■□□□□ 0.23
ACTN4-205ENST00000477174 ARMC9Q7Z3E5 817 aa16.46■□□□□ 0.23
ACTN4-205ENST00000477174 AACSQ86V21 672 aa16.46■□□□□ 0.23
ACTN4-205ENST00000477174 DZIP1Q86YF9 867 aaKnown RBP16.46■□□□□ 0.23
ACTN4-205ENST00000477174 DAGLAQ9Y4D2 1042 aa16.46■□□□□ 0.23
ACTN4-205ENST00000477174 TCP10L2B9ZVM9 353 aa16.45■□□□□ 0.22
ACTN4-205ENST00000477174 PPP1R12BO60237 982 aaPredicted RBP16.45■□□□□ 0.22
ACTN4-205ENST00000477174 ZNF157P51786 506 aaPredicted RBP16.45■□□□□ 0.22
ACTN4-205ENST00000477174 NOGQ13253 232 aa16.45■□□□□ 0.22
ACTN4-205ENST00000477174 GRM1Q13255 1194 aa16.45■□□□□ 0.22
ACTN4-205ENST00000477174 TTLL12Q14166 644 aaPredicted RBP16.45■□□□□ 0.22
ACTN4-205ENST00000477174 FAM83AQ86UY5 434 aa16.45■□□□□ 0.22
ACTN4-205ENST00000477174 IL1RAPL2Q9NP60 686 aa16.45■□□□□ 0.22
ACTN4-205ENST00000477174 UNCXA6NJT0 531 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 UBE2Q2LH0YL09 131 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 APBB1O00213 710 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 LDHCP07864 332 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 GSTO1P78417 241 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 MECOMQ03112 1051 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 AAMPQ13685 434 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 MAP3K11Q16584 847 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 LDLRAD1Q5T700 205 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 NBPF12Q5TAG4 269 aaPredicted RBP16.44■□□□□ 0.22
ACTN4-205ENST00000477174 CDC42EP5Q6NZY7 148 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 TBC1D9Q6ZT07 1266 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 DCTPP1Q9H773 170 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 WBP1LQ9NX94 342 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 TLR7Q9NYK1 1049 aaKnown RBP16.44■□□□□ 0.22
ACTN4-205ENST00000477174 LRP2BPQ9P2M1 347 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 GAKO14976 1311 aa16.44■□□□□ 0.22
ACTN4-205ENST00000477174 FAM155AB1AL88 458 aaPredicted RBP16.43■□□□□ 0.22
ACTN4-205ENST00000477174 IFIT2P09913 472 aaKnown RBP16.43■□□□□ 0.22
ACTN4-205ENST00000477174 MOB2Q70IA6 237 aa16.43■□□□□ 0.22
ACTN4-205ENST00000477174 TEPSINQ96N21 525 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms