RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 FBXO3Q9UK99 471 aa21.38■■□□□ 1.01
SMARCD3-210ENST00000477169 AKAP11Q9UKA4 1901 aa21.37■■□□□ 1.01
SMARCD3-210ENST00000477169 CLRN2A0PK11 232 aa21.37■■□□□ 1.01
SMARCD3-210ENST00000477169 FRAT2O75474 233 aaPredicted RBP21.37■■□□□ 1.01
SMARCD3-210ENST00000477169 TRPA1O75762 1119 aa21.37■■□□□ 1.01
SMARCD3-210ENST00000477169 TBC1D22AQ8WUA7 517 aa21.37■■□□□ 1.01
SMARCD3-210ENST00000477169 ABHD8Q96I13 439 aa21.37■■□□□ 1.01
SMARCD3-210ENST00000477169 IQSEC3Q9UPP2 1182 aaPredicted RBP21.37■■□□□ 1.01
SMARCD3-210ENST00000477169 CASP8AP2Q9UKL3 1982 aa21.36■■□□□ 1.01
SMARCD3-210ENST00000477169 BCAMP50895 628 aa21.36■■□□□ 1.01
SMARCD3-210ENST00000477169 PRKG1Q13976 671 aa21.36■■□□□ 1.01
SMARCD3-210ENST00000477169 SUPT20HL1Q3ZLR7 823 aa21.36■■□□□ 1.01
SMARCD3-210ENST00000477169 LDLRAD1Q5T700 205 aa21.36■■□□□ 1.01
SMARCD3-210ENST00000477169 ATG9AQ7Z3C6 839 aa21.36■■□□□ 1.01
SMARCD3-210ENST00000477169 CHMP4BQ9H444 224 aaKnown RBP21.36■■□□□ 1.01
SMARCD3-210ENST00000477169 VEZTQ9HBM0 779 aa21.36■■□□□ 1.01
SMARCD3-210ENST00000477169 CHAF1AQ13111 956 aaPredicted RBP21.35■■□□□ 1.01
SMARCD3-210ENST00000477169 MAP3K11Q16584 847 aa21.35■■□□□ 1.01
SMARCD3-210ENST00000477169 LPIN2Q92539 896 aa21.35■■□□□ 1.01
SMARCD3-210ENST00000477169 CRBNQ96SW2 442 aa21.35■■□□□ 1.01
SMARCD3-210ENST00000477169 ANGEL1Q9UNK9 670 aaKnown RBP21.35■■□□□ 1.01
SMARCD3-210ENST00000477169 AOX1Q06278 1338 aa21.34■■□□□ 1.01
SMARCD3-210ENST00000477169 PNMA6EA0A0J9YXQ4 647 aa21.34■■□□□ 1.01
SMARCD3-210ENST00000477169 SRGAP3O43295 1099 aa21.34■■□□□ 1.01
SMARCD3-210ENST00000477169 PPP1R12BO60237 982 aaPredicted RBP21.34■■□□□ 1.01
SMARCD3-210ENST00000477169 CIAO1O76071 339 aa21.34■■□□□ 1.01
SMARCD3-210ENST00000477169 SLC5A1P13866 664 aa21.34■■□□□ 1.01
SMARCD3-210ENST00000477169 CRKP46108 304 aa21.34■■□□□ 1.01
SMARCD3-210ENST00000477169 HDLBPQ00341 1268 aaKnown RBP21.34■■□□□ 1.01
SMARCD3-210ENST00000477169 TNFAIP1Q13829 316 aa21.34■■□□□ 1.01
SMARCD3-210ENST00000477169 ZNF70Q9UC06 446 aaPredicted RBP21.34■■□□□ 1.01
SMARCD3-210ENST00000477169 ARAP2Q8WZ64 1704 aa21.33■■□□□ 1.01
SMARCD3-210ENST00000477169 UNCXA6NJT0 531 aa21.33■■□□□ 1.01
SMARCD3-210ENST00000477169 TM4SF4P48230 202 aa21.33■■□□□ 1.01
SMARCD3-210ENST00000477169 ATP8B2P98198 1209 aa21.33■■□□□ 1.01
SMARCD3-210ENST00000477169 RASA3Q14644 834 aa21.33■■□□□ 1.01
SMARCD3-210ENST00000477169 SPDYE2Q495Y8 402 aa21.33■■□□□ 1.01
SMARCD3-210ENST00000477169 MRIQ9BWK5 157 aa21.33■■□□□ 1.01
SMARCD3-210ENST00000477169 TDRD3Q9H7E2 651 aaKnown RBP21.33■■□□□ 1.01
SMARCD3-210ENST00000477169 GRIK5Q16478 980 aa21.32■■□□□ 1
SMARCD3-210ENST00000477169 CEP85Q6P2H3 762 aa21.32■■□□□ 1
SMARCD3-210ENST00000477169 CEP126Q9P2H0 1117 aa21.32■■□□□ 1
SMARCD3-210ENST00000477169 SUGT1Q9Y2Z0 365 aa21.32■■□□□ 1
SMARCD3-210ENST00000477169 IL15P40933 162 aaPredicted RBP21.31■■□□□ 1
SMARCD3-210ENST00000477169 POLA2Q14181 598 aa21.31■■□□□ 1
SMARCD3-210ENST00000477169 NBPF12Q5TAG4 269 aaPredicted RBP21.31■■□□□ 1
SMARCD3-210ENST00000477169 SIL1Q9H173 461 aa21.31■■□□□ 1
SMARCD3-210ENST00000477169 COPRSQ9NQ92 184 aa21.31■■□□□ 1
SMARCD3-210ENST00000477169 FZD1Q9UP38 647 aa21.31■■□□□ 1
SMARCD3-210ENST00000477169 PA2G4Q9UQ80 394 aaKnown RBP21.31■■□□□ 1
SMARCD3-210ENST00000477169 SSH3Q8TE77 659 aa21.3■■□□□ 1
SMARCD3-210ENST00000477169 TEKT1Q969V4 418 aa21.3■■□□□ 1
SMARCD3-210ENST00000477169 SLC10A4Q96EP9 437 aa21.3■■□□□ 1
SMARCD3-210ENST00000477169 MCOLN1Q9GZU1 580 aa21.3■■□□□ 1
SMARCD3-210ENST00000477169 SSC5DA1L4H1 1573 aa21.3■■□□□ 1
SMARCD3-210ENST00000477169 IREB2P48200 963 aaKnown RBP21.29■■□□□ 1
SMARCD3-210ENST00000477169 SREBF2Q12772 1141 aa21.29■■□□□ 1
SMARCD3-210ENST00000477169 DGKZQ13574 1117 aa21.29■■□□□ 1
SMARCD3-210ENST00000477169 ATP2B3Q16720 1220 aa21.29■■□□□ 1
SMARCD3-210ENST00000477169 SPRYD7Q5W111 196 aa21.29■■□□□ 1
SMARCD3-210ENST00000477169 WDR66Q8TBY9 1149 aa21.29■■□□□ 1
SMARCD3-210ENST00000477169 MAST3O60307 1309 aa21.29■■□□□ 1
SMARCD3-210ENST00000477169 USP2O75604 605 aaPredicted RBP21.28■■□□□ 1
SMARCD3-210ENST00000477169 TNNI2P48788 182 aa21.28■■□□□ 1
SMARCD3-210ENST00000477169 MKRN3Q13064 507 aaKnown RBP21.28■■□□□ 1
SMARCD3-210ENST00000477169 CENPBP07199 599 aaPredicted RBP21.27■■□□□ 1
SMARCD3-210ENST00000477169 INHBEP58166 350 aa21.27■■□□□ 1
SMARCD3-210ENST00000477169 SIRT2Q8IXJ6 389 aa21.27■■□□□ 1
SMARCD3-210ENST00000477169 RPAP2Q8IXW5 612 aaPredicted RBP21.27■■□□□ 1
SMARCD3-210ENST00000477169 ZDHHC15Q96MV8 337 aa21.27■■□□□ 1
SMARCD3-210ENST00000477169 GNL3LQ9NVN8 582 aaKnown RBP21.27■■□□□ 1
SMARCD3-210ENST00000477169 TCP10L2B9ZVM9 353 aa21.26■□□□□ 0.99
SMARCD3-210ENST00000477169 ZBTB48P10074 688 aaPredicted RBP21.26■□□□□ 0.99
SMARCD3-210ENST00000477169 HHIPL2Q6UWX4 724 aa21.26■□□□□ 0.99
SMARCD3-210ENST00000477169 ANKRD13AQ8IZ07 590 aa21.26■□□□□ 0.99
SMARCD3-210ENST00000477169 EXOC6Q8TAG9 804 aa21.26■□□□□ 0.99
SMARCD3-210ENST00000477169 TEPSINQ96N21 525 aa21.26■□□□□ 0.99
SMARCD3-210ENST00000477169 MANSC4A6NHS7 340 aaPredicted RBP21.25■□□□□ 0.99
SMARCD3-210ENST00000477169 CCDC85CA6NKD9 419 aa21.25■□□□□ 0.99
SMARCD3-210ENST00000477169 ZBTB22O15209 634 aa21.25■□□□□ 0.99
SMARCD3-210ENST00000477169 IRX6P78412 446 aaPredicted RBP21.25■□□□□ 0.99
SMARCD3-210ENST00000477169 CLMNQ96JQ2 1002 aa21.25■□□□□ 0.99
SMARCD3-210ENST00000477169 TBC1D8O95759 1140 aa21.24■□□□□ 0.99
SMARCD3-210ENST00000477169 APOBEC3HQ6NTF7 200 aaKnown RBP21.24■□□□□ 0.99
SMARCD3-210ENST00000477169 WNK4Q96J92 1243 aa21.24■□□□□ 0.99
SMARCD3-210ENST00000477169 CFHR5Q9BXR6 569 aa21.24■□□□□ 0.99
SMARCD3-210ENST00000477169 TMEM39BQ9GZU3 492 aa21.24■□□□□ 0.99
SMARCD3-210ENST00000477169 TMOD2Q9NZR1 351 aa21.24■□□□□ 0.99
SMARCD3-210ENST00000477169 MYH13Q9UKX3 1938 aa21.23■□□□□ 0.99
SMARCD3-210ENST00000477169 SEMA3EO15041 775 aa21.23■□□□□ 0.99
SMARCD3-210ENST00000477169 ALDH1A1P00352 501 aa21.23■□□□□ 0.99
SMARCD3-210ENST00000477169 NOM1Q5C9Z4 860 aaKnown RBP21.23■□□□□ 0.99
SMARCD3-210ENST00000477169 FKBP1CQ5VVH2 108 aa21.23■□□□□ 0.99
SMARCD3-210ENST00000477169 FAM83AQ86UY5 434 aa21.23■□□□□ 0.99
SMARCD3-210ENST00000477169 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.23■□□□□ 0.99
SMARCD3-210ENST00000477169 DENND2AQ9ULE3 1009 aa21.23■□□□□ 0.99
SMARCD3-210ENST00000477169 PCDHB15Q9Y5E8 787 aa21.23■□□□□ 0.99
SMARCD3-210ENST00000477169 NOP58Q9Y2X3 529 aaKnown RBP21.22■□□□□ 0.99
SMARCD3-210ENST00000477169 HMMRO75330 724 aa21.21■□□□□ 0.99
SMARCD3-210ENST00000477169 SURF6O75683 361 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms