RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 TDRD3Q9H7E2 651 aaKnown RBP19.84■□□□□ 0.77
SMG5-204ENST00000476954 SNCAIPQ9Y6H5 919 aa19.84■□□□□ 0.77
SMG5-204ENST00000476954 MYPNQ86TC9 1320 aa19.83■□□□□ 0.77
SMG5-204ENST00000476954 WDHD1O75717 1129 aaPredicted RBP19.83■□□□□ 0.77
SMG5-204ENST00000476954 FMNL1O95466 1100 aaPredicted RBP19.83■□□□□ 0.77
SMG5-204ENST00000476954 CETPP11597 493 aa19.83■□□□□ 0.77
SMG5-204ENST00000476954 CCDC146Q8IYE0 955 aa19.83■□□□□ 0.77
SMG5-204ENST00000476954 CCER1Q8TC90 406 aaPredicted RBP19.83■□□□□ 0.77
SMG5-204ENST00000476954 MTMR10Q9NXD2 777 aa19.83■□□□□ 0.77
SMG5-204ENST00000476954 CSADQ9Y600 493 aa19.83■□□□□ 0.77
SMG5-204ENST00000476954 MGAMO43451 1857 aa19.82■□□□□ 0.76
SMG5-204ENST00000476954 TCP10L2B9ZVM9 353 aa19.82■□□□□ 0.76
SMG5-204ENST00000476954 ELL2O00472 640 aaPredicted RBP19.82■□□□□ 0.76
SMG5-204ENST00000476954 IRF6O14896 467 aa19.82■□□□□ 0.76
SMG5-204ENST00000476954 TAF5LO75529 589 aa19.82■□□□□ 0.76
SMG5-204ENST00000476954 CHRNDQ07001 517 aa19.82■□□□□ 0.76
SMG5-204ENST00000476954 HELBQ8NG08 1087 aaPredicted RBP19.82■□□□□ 0.76
SMG5-204ENST00000476954 GDF15Q99988 308 aa19.82■□□□□ 0.76
SMG5-204ENST00000476954 SGPL1O95470 568 aa19.81■□□□□ 0.76
SMG5-204ENST00000476954 PRKCZQ05513 592 aa19.81■□□□□ 0.76
SMG5-204ENST00000476954 MAP3K2Q9Y2U5 619 aa19.81■□□□□ 0.76
SMG5-204ENST00000476954 ADGRA2Q96PE1 1338 aa19.8■□□□□ 0.76
SMG5-204ENST00000476954 IL1R1P14778 569 aa19.8■□□□□ 0.76
SMG5-204ENST00000476954 ITGA6P23229 1130 aa19.8■□□□□ 0.76
SMG5-204ENST00000476954 TNFAIP1Q13829 316 aa19.8■□□□□ 0.76
SMG5-204ENST00000476954 CWF19L2Q2TBE0 894 aaKnown RBP19.8■□□□□ 0.76
SMG5-204ENST00000476954 ZKSCAN4Q969J2 545 aaPredicted RBP19.8■□□□□ 0.76
SMG5-204ENST00000476954 ZCCHC17Q9NP64 241 aaKnown RBP19.8■□□□□ 0.76
SMG5-204ENST00000476954 MBIPQ9NS73 344 aa19.8■□□□□ 0.76
SMG5-204ENST00000476954 ZMYND8Q9ULU4 1186 aaPredicted RBP19.8■□□□□ 0.76
SMG5-204ENST00000476954 BCAMP50895 628 aa19.79■□□□□ 0.76
SMG5-204ENST00000476954 UBXN2AP68543 259 aa19.79■□□□□ 0.76
SMG5-204ENST00000476954 SNAPC2Q13487 334 aa19.79■□□□□ 0.76
SMG5-204ENST00000476954 GPR153Q6NV75 609 aa19.79■□□□□ 0.76
SMG5-204ENST00000476954 UBE3BQ7Z3V4 1068 aa19.79■□□□□ 0.76
SMG5-204ENST00000476954 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.79■□□□□ 0.76
SMG5-204ENST00000476954 MPHOSPH8Q99549 860 aa19.79■□□□□ 0.76
SMG5-204ENST00000476954 GABRQQ9UN88 632 aa19.79■□□□□ 0.76
SMG5-204ENST00000476954 HOXD10P28358 340 aa19.78■□□□□ 0.76
SMG5-204ENST00000476954 FKBP1AP62942 108 aaKnown RBP19.78■□□□□ 0.76
SMG5-204ENST00000476954 ERO1BQ86YB8 467 aa19.78■□□□□ 0.76
SMG5-204ENST00000476954 BMP8BP34820 402 aa19.77■□□□□ 0.76
SMG5-204ENST00000476954 DIS3LQ8TF46 1054 aaKnown RBP19.77■□□□□ 0.76
SMG5-204ENST00000476954 PAWRQ96IZ0 340 aaKnown RBP19.77■□□□□ 0.76
SMG5-204ENST00000476954 DEFB118Q96PH6 123 aa19.77■□□□□ 0.76
SMG5-204ENST00000476954 TFRCP02786 760 aaKnown RBP19.76■□□□□ 0.75
SMG5-204ENST00000476954 ELNP15502 786 aa19.76■□□□□ 0.75
SMG5-204ENST00000476954 CACNB3P54284 484 aa19.76■□□□□ 0.75
SMG5-204ENST00000476954 PPIL2Q13356 520 aa19.76■□□□□ 0.75
SMG5-204ENST00000476954 C15orf52Q6ZUT6 534 aaKnown RBP19.76■□□□□ 0.75
SMG5-204ENST00000476954 ZNF804AQ7Z570 1209 aa19.76■□□□□ 0.75
SMG5-204ENST00000476954 DZIP1LQ8IYY4 767 aaKnown RBP19.76■□□□□ 0.75
SMG5-204ENST00000476954 C7orf61Q8IZ16 206 aa19.76■□□□□ 0.75
SMG5-204ENST00000476954 WRNIP1Q96S55 665 aa19.76■□□□□ 0.75
SMG5-204ENST00000476954 TTF2Q9UNY4 1162 aaKnown RBP19.76■□□□□ 0.75
SMG5-204ENST00000476954 PI4KAP2A4QPH2 592 aa19.75■□□□□ 0.75
SMG5-204ENST00000476954 H7C1W4 665 aa19.75■□□□□ 0.75
SMG5-204ENST00000476954 PDHXO00330 501 aa19.75■□□□□ 0.75
SMG5-204ENST00000476954 PI4KAP1Q8N8J0 262 aa19.75■□□□□ 0.75
SMG5-204ENST00000476954 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.75■□□□□ 0.75
SMG5-204ENST00000476954 NEURL1BA8MQ27 555 aa19.74■□□□□ 0.75
SMG5-204ENST00000476954 DDX58O95786 925 aaKnown RBP19.74■□□□□ 0.75
SMG5-204ENST00000476954 SYN1P17600 705 aa19.74■□□□□ 0.75
SMG5-204ENST00000476954 LRIT3Q3SXY7 679 aa19.74■□□□□ 0.75
SMG5-204ENST00000476954 SLAIN1Q8ND83 568 aa19.74■□□□□ 0.75
SMG5-204ENST00000476954 ADCY3O60266 1144 aa19.73■□□□□ 0.75
SMG5-204ENST00000476954 INHAP05111 366 aa19.73■□□□□ 0.75
SMG5-204ENST00000476954 GRIK5Q16478 980 aa19.73■□□□□ 0.75
SMG5-204ENST00000476954 KSR2Q6VAB6 950 aa19.73■□□□□ 0.75
SMG5-204ENST00000476954 ANKRD23Q86SG2 305 aa19.73■□□□□ 0.75
SMG5-204ENST00000476954 SERPINA10Q9UK55 444 aa19.73■□□□□ 0.75
SMG5-204ENST00000476954 TTC28Q96AY4 2481 aa19.73■□□□□ 0.75
SMG5-204ENST00000476954 CRKP46108 304 aa19.72■□□□□ 0.75
SMG5-204ENST00000476954 TNNI2P48788 182 aa19.72■□□□□ 0.75
SMG5-204ENST00000476954 MFSD14BQ5SR56 506 aa19.72■□□□□ 0.75
SMG5-204ENST00000476954 C8orf58Q8NAV2 365 aa19.72■□□□□ 0.75
SMG5-204ENST00000476954 FAM205AQ6ZU69 1335 aa19.72■□□□□ 0.75
SMG5-204ENST00000476954 DOCK3Q8IZD9 2030 aa19.71■□□□□ 0.75
SMG5-204ENST00000476954 CSF1RP07333 972 aa19.71■□□□□ 0.75
SMG5-204ENST00000476954 BCRP11274 1271 aa19.71■□□□□ 0.75
SMG5-204ENST00000476954 MAGEA10P43363 369 aaPredicted RBP19.71■□□□□ 0.75
SMG5-204ENST00000476954 FCGRTP55899 365 aa19.71■□□□□ 0.75
SMG5-204ENST00000476954 MOGSQ13724 837 aa19.71■□□□□ 0.75
SMG5-204ENST00000476954 PLA2G12BQ9BX93 195 aa19.71■□□□□ 0.75
SMG5-204ENST00000476954 ZNF853P0CG23 659 aa19.7■□□□□ 0.74
SMG5-204ENST00000476954 CYP2C8P10632 490 aa19.7■□□□□ 0.74
SMG5-204ENST00000476954 INPP5BP32019 993 aa19.7■□□□□ 0.74
SMG5-204ENST00000476954 FLT3LGP49771 235 aa19.7■□□□□ 0.74
SMG5-204ENST00000476954 CASP7P55210 303 aa19.7■□□□□ 0.74
SMG5-204ENST00000476954 TDHQ8IZJ6 230 aa19.7■□□□□ 0.74
SMG5-204ENST00000476954 CRISPLD2Q9H0B8 497 aa19.7■□□□□ 0.74
SMG5-204ENST00000476954 PLIN1O60240 522 aa19.69■□□□□ 0.74
SMG5-204ENST00000476954 PPATQ06203 517 aa19.69■□□□□ 0.74
SMG5-204ENST00000476954 GUCD1Q96NT3 240 aa19.69■□□□□ 0.74
SMG5-204ENST00000476954 PAK6Q9NQU5 681 aaPredicted RBP19.69■□□□□ 0.74
SMG5-204ENST00000476954 PRDM6Q9NQX0 595 aa19.69■□□□□ 0.74
SMG5-204ENST00000476954 RPTORQ8N122 1335 aa19.69■□□□□ 0.74
SMG5-204ENST00000476954 ANKRD18BA2A2Z9 1011 aa19.68■□□□□ 0.74
SMG5-204ENST00000476954 NEXNQ0ZGT2 675 aa19.68■□□□□ 0.74
SMG5-204ENST00000476954 MIGA2Q7L4E1 593 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 218.4 ms