RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 NFE2L2Q16236 605 aa13.05□□□□□ -0.32
CCHCR1-212ENST00000475684 NECAB2Q7Z6G3 386 aa13.05□□□□□ -0.32
CCHCR1-212ENST00000475684 SYMPKQ92797 1274 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-212ENST00000475684 FAM122AQ96E09 287 aa13.05□□□□□ -0.32
CCHCR1-212ENST00000475684 OTOFQ9HC10 1997 aa13.05□□□□□ -0.32
CCHCR1-212ENST00000475684 POTEB2H3BUK9 544 aa13.04□□□□□ -0.32
CCHCR1-212ENST00000475684 RBM5P52756 815 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCHCR1-212ENST00000475684 FAM109BQ6ICB4 259 aaPredicted RBP13.04□□□□□ -0.32
CCHCR1-212ENST00000475684 JARID2Q92833 1246 aaPredicted RBP13.04□□□□□ -0.32
CCHCR1-212ENST00000475684 CDC5LQ99459 802 aaKnown RBP13.04□□□□□ -0.32
CCHCR1-212ENST00000475684 SPDYE5A6NIY4 337 aa13.03□□□□□ -0.32
CCHCR1-212ENST00000475684 SNAPC2Q13487 334 aa13.03□□□□□ -0.32
CCHCR1-212ENST00000475684 CERS5Q8N5B7 392 aa13.03□□□□□ -0.32
CCHCR1-212ENST00000475684 BSDC1Q9NW68 430 aaPredicted RBP13.03□□□□□ -0.32
CCHCR1-212ENST00000475684 LEMD3Q9Y2U8 911 aa13.03□□□□□ -0.32
CCHCR1-212ENST00000475684 AOX1Q06278 1338 aa13.03□□□□□ -0.32
CCHCR1-212ENST00000475684 ADCY3O60266 1144 aa13.02□□□□□ -0.33
CCHCR1-212ENST00000475684 KLRK1P26718 216 aa13.02□□□□□ -0.33
CCHCR1-212ENST00000475684 TNFAIP1Q13829 316 aa13.02□□□□□ -0.33
CCHCR1-212ENST00000475684 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.02□□□□□ -0.33
CCHCR1-212ENST00000475684 DIS3LQ8TF46 1054 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-212ENST00000475684 BABAM1Q9NWV8 329 aa13.02□□□□□ -0.33
CCHCR1-212ENST00000475684 GABRQQ9UN88 632 aa13.02□□□□□ -0.33
CCHCR1-212ENST00000475684 ECM29Q5VYK3 1845 aa13.02□□□□□ -0.33
CCHCR1-212ENST00000475684 INHAP05111 366 aa13.01□□□□□ -0.33
CCHCR1-212ENST00000475684 PCCAP05165 728 aaPredicted RBP13.01□□□□□ -0.33
CCHCR1-212ENST00000475684 FCGRTP55899 365 aa13.01□□□□□ -0.33
CCHCR1-212ENST00000475684 ERO1BQ86YB8 467 aa13.01□□□□□ -0.33
CCHCR1-212ENST00000475684 CDAN1Q8IWY9 1227 aa13.01□□□□□ -0.33
CCHCR1-212ENST00000475684 MAFAQ8NHW3 353 aaPredicted RBP13.01□□□□□ -0.33
CCHCR1-212ENST00000475684 CRISPLD2Q9H0B8 497 aa13.01□□□□□ -0.33
CCHCR1-212ENST00000475684 PRUNE2Q8WUY3 3088 aa13□□□□□ -0.33
CCHCR1-212ENST00000475684 TNFRSF10AO00220 468 aa13□□□□□ -0.33
CCHCR1-212ENST00000475684 PDHXO00330 501 aa13□□□□□ -0.33
CCHCR1-212ENST00000475684 IRF6O14896 467 aa13□□□□□ -0.33
CCHCR1-212ENST00000475684 ELNP15502 786 aa13□□□□□ -0.33
CCHCR1-212ENST00000475684 PPP2R1AP30153 589 aa13□□□□□ -0.33
CCHCR1-212ENST00000475684 KRT24Q2M2I5 525 aa13□□□□□ -0.33
CCHCR1-212ENST00000475684 HDGFL1Q5TGJ6 251 aa13□□□□□ -0.33
CCHCR1-212ENST00000475684 RIC3Q7Z5B4 369 aa13□□□□□ -0.33
CCHCR1-212ENST00000475684 TEPSINQ96N21 525 aa13□□□□□ -0.33
CCHCR1-212ENST00000475684 PLEKHF1Q96S99 279 aa13□□□□□ -0.33
CCHCR1-212ENST00000475684 CD209Q9NNX6 404 aa13□□□□□ -0.33
CCHCR1-212ENST00000475684 PAK6Q9NQU5 681 aaPredicted RBP13□□□□□ -0.33
CCHCR1-212ENST00000475684 DBF4Q9UBU7 674 aaPredicted RBP13□□□□□ -0.33
CCHCR1-212ENST00000475684 ZNF70Q9UC06 446 aaPredicted RBP13□□□□□ -0.33
CCHCR1-212ENST00000475684 LAMA2P24043 3122 aaKnown RBP13□□□□□ -0.33
CCHCR1-212ENST00000475684 ALPK3Q96L96 1907 aa13□□□□□ -0.33
CCHCR1-212ENST00000475684 FAM205AQ6ZU69 1335 aa12.99□□□□□ -0.33
CCHCR1-212ENST00000475684 ADGRA2Q96PE1 1338 aa12.99□□□□□ -0.33
CCHCR1-212ENST00000475684 ZNF697Q5TEC3 545 aa12.99□□□□□ -0.33
CCHCR1-212ENST00000475684 ANKRD23Q86SG2 305 aa12.99□□□□□ -0.33
CCHCR1-212ENST00000475684 MYD88Q99836 296 aa12.99□□□□□ -0.33
CCHCR1-212ENST00000475684 TMEM39BQ9GZU3 492 aa12.99□□□□□ -0.33
CCHCR1-212ENST00000475684 HYPKQ9NX55 129 aa12.99□□□□□ -0.33
CCHCR1-212ENST00000475684 SNCAIPQ9Y6H5 919 aa12.99□□□□□ -0.33
CCHCR1-212ENST00000475684 MAPK8IP3Q9UPT6 1336 aa12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 TCP10L2B9ZVM9 353 aa12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 KCNJ4P48050 445 aa12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 CTSWP56202 376 aa12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 PPIL2Q13356 520 aa12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 SPDYE2Q495Y8 402 aa12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 ANKLE1Q8NAG6 615 aa12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 CCDC191Q8NCU4 936 aa12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 PXYLP1Q8TE99 480 aa12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 ZKSCAN4Q969J2 545 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 CDX2Q99626 313 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 ANKRD2Q9GZV1 360 aa12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 NBPF3Q9H094 633 aa12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 TDRD3Q9H7E2 651 aaKnown RBP12.98□□□□□ -0.33
CCHCR1-212ENST00000475684 TMEM265A0A087WTH1 108 aa12.97□□□□□ -0.33
CCHCR1-212ENST00000475684 TNNI2P48788 182 aa12.97□□□□□ -0.33
CCHCR1-212ENST00000475684 FLT3LGP49771 235 aa12.97□□□□□ -0.33
CCHCR1-212ENST00000475684 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
CCHCR1-212ENST00000475684 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-212ENST00000475684 WRNIP1Q96S55 665 aa12.97□□□□□ -0.33
CCHCR1-212ENST00000475684 GREM2Q9H772 168 aa12.97□□□□□ -0.33
CCHCR1-212ENST00000475684 CWC25Q9NXE8 425 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-212ENST00000475684 MUC3AQ02505 3323 aa12.97□□□□□ -0.33
CCHCR1-212ENST00000475684 IGHMBP2P38935 993 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-212ENST00000475684 FKBP1AP62942 108 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-212ENST00000475684 MDM2Q00987 491 aaPredicted RBP12.96□□□□□ -0.33
CCHCR1-212ENST00000475684 TTLL11Q8NHH1 800 aa12.96□□□□□ -0.33
CCHCR1-212ENST00000475684 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCHCR1-212ENST00000475684 C11orf49Q9H6J7 331 aa12.96□□□□□ -0.33
CCHCR1-212ENST00000475684 TAOK2Q9UL54 1235 aa12.96□□□□□ -0.33
CCHCR1-212ENST00000475684 JAG2Q9Y219 1238 aa12.96□□□□□ -0.33
CCHCR1-212ENST00000475684 SPEF2Q9C093 1822 aa12.96□□□□□ -0.33
CCHCR1-212ENST00000475684 BCRP11274 1271 aa12.95□□□□□ -0.34
CCHCR1-212ENST00000475684 RIPK4P57078 832 aa12.95□□□□□ -0.34
CCHCR1-212ENST00000475684 PPATQ06203 517 aa12.95□□□□□ -0.34
CCHCR1-212ENST00000475684 PNNQ9H307 717 aaKnown RBP12.95□□□□□ -0.34
CCHCR1-212ENST00000475684 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
CCHCR1-212ENST00000475684 IRF5Q13568 498 aa12.94□□□□□ -0.34
CCHCR1-212ENST00000475684 TJAP1Q5JTD0 557 aa12.94□□□□□ -0.34
CCHCR1-212ENST00000475684 PARK7Q99497 189 aaKnown RBP12.94□□□□□ -0.34
CCHCR1-212ENST00000475684 LAS1LQ9Y4W2 734 aaKnown RBP12.94□□□□□ -0.34
CCHCR1-212ENST00000475684 TNPO2O14787 897 aaKnown RBP12.93□□□□□ -0.34
CCHCR1-212ENST00000475684 CYP2C8P10632 490 aa12.93□□□□□ -0.34
CCHCR1-212ENST00000475684 IL1R1P14778 569 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms