RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 SPC25Q9HBM1 224 aa16■□□□□ 0.15
SSPO-205ENST00000475488 GPCPD1Q9NPB8 672 aa16■□□□□ 0.15
SSPO-205ENST00000475488 RBM27Q9P2N5 1060 aaKnown RBP16■□□□□ 0.15
SSPO-205ENST00000475488 CCDC171Q6TFL3 1326 aa16■□□□□ 0.15
SSPO-205ENST00000475488 SETDB1Q15047 1291 aa16■□□□□ 0.15
SSPO-205ENST00000475488 MIGA1Q8NAN2 632 aa16■□□□□ 0.15
SSPO-205ENST00000475488 NCAPGQ9BPX3 1015 aa16■□□□□ 0.15
SSPO-205ENST00000475488 SWAP70Q9UH65 585 aa16■□□□□ 0.15
SSPO-205ENST00000475488 FEZ2Q9UHY8 353 aaPredicted RBP16■□□□□ 0.15
SSPO-205ENST00000475488 LEO1Q8WVC0 666 aaPredicted RBP16■□□□□ 0.15
SSPO-205ENST00000475488 CHPF2Q9P2E5 772 aa16■□□□□ 0.15
SSPO-205ENST00000475488 KIF22Q14807 665 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 TMCO4Q5TGY1 634 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 ATP5DP30049 168 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 PLCB4Q15147 1175 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 CARD10Q9BWT7 1032 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 EMILIN1Q9Y6C2 1016 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 TRAPPC3LQ5T215 181 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 CCDC42Q96M95 316 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.99■□□□□ 0.15
SSPO-205ENST00000475488 RRP9O43818 475 aaKnown RBP15.99■□□□□ 0.15
SSPO-205ENST00000475488 STMN2Q93045 179 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 ANO6Q4KMQ2 910 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 NECAB1Q8N987 351 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 RBM28Q9NW13 759 aaKnown RBP15.99■□□□□ 0.15
SSPO-205ENST00000475488 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 MCM6Q14566 821 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 LIN9Q5TKA1 542 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 CPLX4Q7Z7G2 160 aa15.99■□□□□ 0.15
SSPO-205ENST00000475488 IGF1RP08069 1367 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 SPDYE16A6NNV3 312 aaPredicted RBP15.98■□□□□ 0.15
SSPO-205ENST00000475488 KIF3CO14782 793 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 CEBPAP49715 358 aaPredicted RBP15.98■□□□□ 0.15
SSPO-205ENST00000475488 NAA25Q14CX7 972 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 SPDYE2Q495Y8 402 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 ARFGAP3Q9NP61 516 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 TRIM75PA6NK02 468 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 CEP120Q8N960 986 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 NAP1L4Q99733 375 aaKnown RBP15.98■□□□□ 0.15
SSPO-205ENST00000475488 OATP04181 439 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 VIMP08670 466 aaKnown RBP15.98■□□□□ 0.15
SSPO-205ENST00000475488 HOOK2Q96ED9 719 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 CALCOCO2Q13137 446 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 CALUO43852 315 aaPredicted RBP15.98■□□□□ 0.15
SSPO-205ENST00000475488 DNM2P50570 870 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 ZYXQ15942 572 aaKnown RBP15.98■□□□□ 0.15
SSPO-205ENST00000475488 CEP85LQ5SZL2 805 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 XAGE3Q8WTP9 111 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 MRRFQ96E11 262 aaKnown RBP15.98■□□□□ 0.15
SSPO-205ENST00000475488 CCNT1O60563 726 aaKnown RBP15.98■□□□□ 0.15
SSPO-205ENST00000475488 ABL1P00519 1130 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 PRKG1Q13976 671 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 PAG1Q9NWQ8 432 aa15.98■□□□□ 0.15
SSPO-205ENST00000475488 TLDC2A0PJX2 215 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 RAB3IPQ96QF0 476 aaPredicted RBP15.97■□□□□ 0.15
SSPO-205ENST00000475488 NR1I2O75469 434 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 PRPF6O94906 941 aaKnown RBP15.97■□□□□ 0.15
SSPO-205ENST00000475488 AZI2Q9H6S1 392 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 DDX39AO00148 427 aaKnown RBP15.97■□□□□ 0.15
SSPO-205ENST00000475488 SPOPO43791 374 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 CAVIN2O95810 425 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 ARID4AP29374 1257 aaPredicted RBP15.97■□□□□ 0.15
SSPO-205ENST00000475488 CASC4Q6P4E1 433 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 GIMAP6Q6P9H5 292 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 INTS8Q75QN2 995 aaKnown RBP15.97■□□□□ 0.15
SSPO-205ENST00000475488 MAEAQ7L5Y9 396 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 NUF2Q9BZD4 464 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 WDR46O15213 610 aaKnown RBP15.97■□□□□ 0.15
SSPO-205ENST00000475488 MED10Q9BTT4 135 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 PSMD6Q15008 389 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 SAMD15Q9P1V8 674 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 EXOC7Q9UPT5 735 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 RTL1A6NKG5 1358 aa15.97■□□□□ 0.15
SSPO-205ENST00000475488 DKC1O60832 514 aaKnown RBP eCLIP15.96■□□□□ 0.15
SSPO-205ENST00000475488 MUM1L1Q5H9M0 696 aa15.96■□□□□ 0.15
SSPO-205ENST00000475488 PKNOX2Q96KN3 472 aa15.96■□□□□ 0.15
SSPO-205ENST00000475488 NOX5Q96PH1 765 aa15.96■□□□□ 0.15
SSPO-205ENST00000475488 ERCC3P19447 782 aa15.96■□□□□ 0.15
SSPO-205ENST00000475488 DIXDC1Q155Q3 683 aa15.96■□□□□ 0.15
SSPO-205ENST00000475488 SV2BQ7L1I2 683 aa15.96■□□□□ 0.15
SSPO-205ENST00000475488 IFT140Q96RY7 1462 aa15.96■□□□□ 0.15
SSPO-205ENST00000475488 BRF1Q92994 677 aa15.96■□□□□ 0.15
SSPO-205ENST00000475488 ZNF830Q96NB3 372 aaPredicted RBP15.96■□□□□ 0.15
SSPO-205ENST00000475488 KRT19P08727 400 aa15.96■□□□□ 0.15
SSPO-205ENST00000475488 SDCCAG8Q86SQ7 713 aaPredicted RBP15.96■□□□□ 0.15
SSPO-205ENST00000475488 FCHSD1Q86WN1 690 aa15.96■□□□□ 0.15
SSPO-205ENST00000475488 CCDC26Q8TAB7 109 aa15.96■□□□□ 0.15
SSPO-205ENST00000475488 FAM47CQ5HY64 1035 aa15.96■□□□□ 0.14
SSPO-205ENST00000475488 RARSP54136 660 aaKnown RBP15.96■□□□□ 0.14
SSPO-205ENST00000475488 MAP7Q14244 749 aa15.96■□□□□ 0.14
SSPO-205ENST00000475488 FYB2Q5VWT5 728 aa15.96■□□□□ 0.14
SSPO-205ENST00000475488 AOPEPQ8N6M6 819 aa15.96■□□□□ 0.14
SSPO-205ENST00000475488 GNPATO15228 680 aa15.95■□□□□ 0.14
SSPO-205ENST00000475488 ANXA1P04083 346 aa15.95■□□□□ 0.14
SSPO-205ENST00000475488 ZKSCAN3Q9BRR0 538 aa15.95■□□□□ 0.14
SSPO-205ENST00000475488 TNFAIP3P21580 790 aa15.95■□□□□ 0.14
SSPO-205ENST00000475488 TBC1D9Q6ZT07 1266 aa15.95■□□□□ 0.14
SSPO-205ENST00000475488 GUCA1BQ9UMX6 200 aa15.95■□□□□ 0.14
SSPO-205ENST00000475488 GRM8O00222 908 aa15.95■□□□□ 0.14
SSPO-205ENST00000475488 ZBED4O75132 1171 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms