RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 MYH3P11055 1940 aa8.68□□□□□ -1.02
LSAMP-204ENST00000475403 DDX58O95786 925 aaKnown RBP8.67□□□□□ -1.02
LSAMP-204ENST00000475403 KLRK1P26718 216 aa8.67□□□□□ -1.02
LSAMP-204ENST00000475403 TNNI2P48788 182 aa8.67□□□□□ -1.02
LSAMP-204ENST00000475403 SNAPC2Q13487 334 aa8.67□□□□□ -1.02
LSAMP-204ENST00000475403 NEUROD2Q15784 382 aa8.67□□□□□ -1.02
LSAMP-204ENST00000475403 PKNOX2Q96KN3 472 aa8.67□□□□□ -1.02
LSAMP-204ENST00000475403 GREM2Q9H772 168 aa8.67□□□□□ -1.02
LSAMP-204ENST00000475403 ZCCHC17Q9NP64 241 aaKnown RBP8.67□□□□□ -1.02
LSAMP-204ENST00000475403 PCDHAC2Q9Y5I4 1007 aa8.67□□□□□ -1.02
LSAMP-204ENST00000475403 BTBD19C9JJ37 291 aa8.66□□□□□ -1.02
LSAMP-204ENST00000475403 TFRCP02786 760 aaKnown RBP8.66□□□□□ -1.02
LSAMP-204ENST00000475403 OSBPP22059 807 aa8.66□□□□□ -1.02
LSAMP-204ENST00000475403 MAP3K9P80192 1104 aa8.66□□□□□ -1.02
LSAMP-204ENST00000475403 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.66□□□□□ -1.02
LSAMP-204ENST00000475403 ZNF804AQ7Z570 1209 aa8.66□□□□□ -1.02
LSAMP-204ENST00000475403 UBE2Q1Q7Z7E8 422 aa8.66□□□□□ -1.02
LSAMP-204ENST00000475403 SLAIN1Q8ND83 568 aa8.66□□□□□ -1.02
LSAMP-204ENST00000475403 PRMT6Q96LA8 375 aaPredicted RBP8.66□□□□□ -1.02
LSAMP-204ENST00000475403 CD209Q9NNX6 404 aa8.66□□□□□ -1.02
LSAMP-204ENST00000475403 DAXXQ9UER7 740 aaPredicted RBP8.66□□□□□ -1.02
LSAMP-204ENST00000475403 CPA4Q9UI42 421 aa8.66□□□□□ -1.02
LSAMP-204ENST00000475403 JAG2Q9Y219 1238 aa8.66□□□□□ -1.02
LSAMP-204ENST00000475403 SPDYE5A6NIY4 337 aa8.65□□□□□ -1.02
LSAMP-204ENST00000475403 TCP10L2B9ZVM9 353 aa8.65□□□□□ -1.02
LSAMP-204ENST00000475403 ANP32CO43423 234 aa8.65□□□□□ -1.02
LSAMP-204ENST00000475403 FCGRTP55899 365 aa8.65□□□□□ -1.02
LSAMP-204ENST00000475403 DUSP27Q5VZP5 1158 aa8.65□□□□□ -1.02
LSAMP-204ENST00000475403 C7orf61Q8IZ16 206 aa8.65□□□□□ -1.02
LSAMP-204ENST00000475403 CERS5Q8N5B7 392 aa8.65□□□□□ -1.02
LSAMP-204ENST00000475403 TTLL11Q8NHH1 800 aa8.65□□□□□ -1.02
LSAMP-204ENST00000475403 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.65□□□□□ -1.02
LSAMP-204ENST00000475403 CCDC136Q96JN2 1154 aa8.65□□□□□ -1.02
LSAMP-204ENST00000475403 WRNIP1Q96S55 665 aa8.65□□□□□ -1.02
LSAMP-204ENST00000475403 UNC93B1Q9H1C4 597 aa8.65□□□□□ -1.02
LSAMP-204ENST00000475403 CHL1O00533 1208 aa8.64□□□□□ -1.03
LSAMP-204ENST00000475403 SGPL1O95470 568 aa8.64□□□□□ -1.03
LSAMP-204ENST00000475403 ANP32AP39687 249 aaKnown RBP8.64□□□□□ -1.03
LSAMP-204ENST00000475403 TMPOP42166 694 aaKnown RBP8.64□□□□□ -1.03
LSAMP-204ENST00000475403 PRKCZQ05513 592 aa8.64□□□□□ -1.03
LSAMP-204ENST00000475403 NEXNQ0ZGT2 675 aa8.64□□□□□ -1.03
LSAMP-204ENST00000475403 SPDYE2Q495Y8 402 aa8.64□□□□□ -1.03
LSAMP-204ENST00000475403 ERO1BQ86YB8 467 aa8.64□□□□□ -1.03
LSAMP-204ENST00000475403 TDHQ8IZJ6 230 aa8.64□□□□□ -1.03
LSAMP-204ENST00000475403 IPO9Q96P70 1041 aaKnown RBP8.64□□□□□ -1.03
LSAMP-204ENST00000475403 METTL22Q9BUU2 404 aaPredicted RBP8.64□□□□□ -1.03
LSAMP-204ENST00000475403 TMEM39BQ9GZU3 492 aa8.64□□□□□ -1.03
LSAMP-204ENST00000475403 PHAXQ9H814 394 aaKnown RBP8.64□□□□□ -1.03
LSAMP-204ENST00000475403 MTMR10Q9NXD2 777 aa8.64□□□□□ -1.03
LSAMP-204ENST00000475403 ZNF70Q9UC06 446 aaPredicted RBP8.64□□□□□ -1.03
LSAMP-204ENST00000475403 TAOK2Q9UL54 1235 aa8.64□□□□□ -1.03
LSAMP-204ENST00000475403 ZMYND8Q9ULU4 1186 aaPredicted RBP8.64□□□□□ -1.03
LSAMP-204ENST00000475403 ARAP2Q8WZ64 1704 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 AOX1Q06278 1338 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 RPTORQ8N122 1335 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 PDHXO00330 501 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 IRF6O14896 467 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 CAPN2P17655 700 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 ITGA6P23229 1130 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 BMP8BP34820 402 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 BCAMP50895 628 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 FKBP1AP62942 108 aaKnown RBP8.63□□□□□ -1.03
LSAMP-204ENST00000475403 CHRNDQ07001 517 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 PPIL2Q13356 520 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 LRIT3Q3SXY7 679 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 GLIPR1L2Q4G1C9 344 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 C17orf99Q6UX52 265 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 NECAB2Q7Z6G3 386 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 HOOK2Q96ED9 719 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 DEFB118Q96PH6 123 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 PARK7Q99497 189 aaKnown RBP8.63□□□□□ -1.03
LSAMP-204ENST00000475403 UBE2OQ9C0C9 1292 aaKnown RBP8.63□□□□□ -1.03
LSAMP-204ENST00000475403 TDRD3Q9H7E2 651 aaKnown RBP8.63□□□□□ -1.03
LSAMP-204ENST00000475403 TMOD2Q9NZR1 351 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 TTF2Q9UNY4 1162 aaKnown RBP8.63□□□□□ -1.03
LSAMP-204ENST00000475403 SNCAIPQ9Y6H5 919 aa8.63□□□□□ -1.03
LSAMP-204ENST00000475403 IRS2Q9Y4H2 1338 aa8.62□□□□□ -1.03
LSAMP-204ENST00000475403 VCANP13611 3396 aa8.62□□□□□ -1.03
LSAMP-204ENST00000475403 ADCY3O60266 1144 aa8.62□□□□□ -1.03
LSAMP-204ENST00000475403 INHAP05111 366 aa8.62□□□□□ -1.03
LSAMP-204ENST00000475403 CTGFP29279 349 aa8.62□□□□□ -1.03
LSAMP-204ENST00000475403 MFSD14BQ5SR56 506 aa8.62□□□□□ -1.03
LSAMP-204ENST00000475403 UBE3BQ7Z3V4 1068 aa8.62□□□□□ -1.03
LSAMP-204ENST00000475403 CDAN1Q8IWY9 1227 aa8.62□□□□□ -1.03
LSAMP-204ENST00000475403 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.62□□□□□ -1.03
LSAMP-204ENST00000475403 PAWRQ96IZ0 340 aaKnown RBP8.62□□□□□ -1.03
LSAMP-204ENST00000475403 PRDM6Q9NQX0 595 aa8.62□□□□□ -1.03
LSAMP-204ENST00000475403 SERPINA10Q9UK55 444 aa8.62□□□□□ -1.03
LSAMP-204ENST00000475403 MAP3K2Q9Y2U5 619 aa8.62□□□□□ -1.03
LSAMP-204ENST00000475403 ADGRA2Q96PE1 1338 aa8.61□□□□□ -1.03
LSAMP-204ENST00000475403 TAF5LO75529 589 aa8.61□□□□□ -1.03
LSAMP-204ENST00000475403 IL1R1P14778 569 aa8.61□□□□□ -1.03
LSAMP-204ENST00000475403 ELNP15502 786 aa8.61□□□□□ -1.03
LSAMP-204ENST00000475403 SYN1P17600 705 aa8.61□□□□□ -1.03
LSAMP-204ENST00000475403 MAGEA10P43363 369 aaPredicted RBP8.61□□□□□ -1.03
LSAMP-204ENST00000475403 DCAF15Q66K64 600 aa8.61□□□□□ -1.03
LSAMP-204ENST00000475403 ANKRD23Q86SG2 305 aa8.61□□□□□ -1.03
LSAMP-204ENST00000475403 CCDC146Q8IYE0 955 aa8.61□□□□□ -1.03
LSAMP-204ENST00000475403 DZIP1LQ8IYY4 767 aaKnown RBP8.61□□□□□ -1.03
LSAMP-204ENST00000475403 IL27Q8NEV9 243 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms