RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 BCAR3O75815 825 aa11.78□□□□□ -0.52
PDPN-204ENST00000475043 PDE8BO95263 885 aa11.78□□□□□ -0.52
PDPN-204ENST00000475043 PDAP1Q13442 181 aaKnown RBP11.78□□□□□ -0.52
PDPN-204ENST00000475043 DLGAP5Q15398 846 aa11.78□□□□□ -0.52
PDPN-204ENST00000475043 CAVIN4Q5BKX8 364 aa11.78□□□□□ -0.52
PDPN-204ENST00000475043 ARHGAP45Q92619 1136 aa11.78□□□□□ -0.52
PDPN-204ENST00000475043 FAM84BQ96KN1 310 aaPredicted RBP11.78□□□□□ -0.52
PDPN-204ENST00000475043 FRAT2O75474 233 aaPredicted RBP11.77□□□□□ -0.53
PDPN-204ENST00000475043 MAP2K2P36507 400 aa11.77□□□□□ -0.53
PDPN-204ENST00000475043 CTCFP49711 727 aaPredicted RBP11.77□□□□□ -0.53
PDPN-204ENST00000475043 RBM5P52756 815 aaKnown RBP eCLIP11.77□□□□□ -0.53
PDPN-204ENST00000475043 PRAMEF18Q5VWM3 479 aa11.77□□□□□ -0.53
PDPN-204ENST00000475043 RGMBQ6NW40 437 aa11.77□□□□□ -0.53
PDPN-204ENST00000475043 TNS4Q8IZW8 715 aa11.77□□□□□ -0.53
PDPN-204ENST00000475043 TDRD7Q8NHU6 1098 aaKnown RBP11.77□□□□□ -0.53
PDPN-204ENST00000475043 MEIS3Q99687 375 aa11.77□□□□□ -0.53
PDPN-204ENST00000475043 SIL1Q9H173 461 aa11.77□□□□□ -0.53
PDPN-204ENST00000475043 IQSEC3Q9UPP2 1182 aaPredicted RBP11.77□□□□□ -0.53
PDPN-204ENST00000475043 LRRFIP2Q9Y608 721 aaKnown RBP11.77□□□□□ -0.53
PDPN-204ENST00000475043 ARAP2Q8WZ64 1704 aa11.77□□□□□ -0.53
PDPN-204ENST00000475043 MYH13Q9UKX3 1938 aa11.76□□□□□ -0.53
PDPN-204ENST00000475043 EYA2O00167 538 aa11.76□□□□□ -0.53
PDPN-204ENST00000475043 MYO1BO43795 1136 aa11.76□□□□□ -0.53
PDPN-204ENST00000475043 RFX5P48382 616 aaPredicted RBP11.76□□□□□ -0.53
PDPN-204ENST00000475043 ZNF157P51786 506 aaPredicted RBP11.76□□□□□ -0.53
PDPN-204ENST00000475043 FKBP1AP62942 108 aaKnown RBP11.76□□□□□ -0.53
PDPN-204ENST00000475043 PTPN12Q05209 780 aaKnown RBP11.76□□□□□ -0.53
PDPN-204ENST00000475043 CHAF1AQ13111 956 aaPredicted RBP11.76□□□□□ -0.53
PDPN-204ENST00000475043 TTLL12Q14166 644 aaPredicted RBP11.76□□□□□ -0.53
PDPN-204ENST00000475043 MFSD14BQ5SR56 506 aa11.76□□□□□ -0.53
PDPN-204ENST00000475043 INTS3Q68E01 1043 aaKnown RBP11.76□□□□□ -0.53
PDPN-204ENST00000475043 ATF7IPQ6VMQ6 1270 aa11.76□□□□□ -0.53
PDPN-204ENST00000475043 VGLL2Q8N8G2 317 aa11.76□□□□□ -0.53
PDPN-204ENST00000475043 CLUAP1Q96AJ1 413 aa11.76□□□□□ -0.53
PDPN-204ENST00000475043 PAPPA2Q9BXP8 1791 aa11.75□□□□□ -0.53
PDPN-204ENST00000475043 GNAI3P08754 354 aa11.75□□□□□ -0.53
PDPN-204ENST00000475043 IFIT1P09914 478 aaKnown RBP11.75□□□□□ -0.53
PDPN-204ENST00000475043 TRIM27P14373 513 aa11.75□□□□□ -0.53
PDPN-204ENST00000475043 NF2P35240 595 aa11.75□□□□□ -0.53
PDPN-204ENST00000475043 LBX1P52954 281 aa11.75□□□□□ -0.53
PDPN-204ENST00000475043 NOGQ13253 232 aa11.75□□□□□ -0.53
PDPN-204ENST00000475043 PUM3Q15397 648 aaKnown RBP11.75□□□□□ -0.53
PDPN-204ENST00000475043 CFAP100Q494V2 611 aa11.75□□□□□ -0.53
PDPN-204ENST00000475043 APOBEC3FQ8IUX4 373 aaKnown RBP11.75□□□□□ -0.53
PDPN-204ENST00000475043 CCDC102AQ96A19 550 aa11.75□□□□□ -0.53
PDPN-204ENST00000475043 TNNQ9UQP3 1299 aa11.75□□□□□ -0.53
PDPN-204ENST00000475043 PCDHAC2Q9Y5I4 1007 aa11.75□□□□□ -0.53
PDPN-204ENST00000475043 FAM205AQ6ZU69 1335 aa11.75□□□□□ -0.53
PDPN-204ENST00000475043 CLRN2A0PK11 232 aa11.74□□□□□ -0.53
PDPN-204ENST00000475043 POTEMA6NI47 508 aa11.74□□□□□ -0.53
PDPN-204ENST00000475043 SLC5A1P13866 664 aa11.74□□□□□ -0.53
PDPN-204ENST00000475043 BCAMP50895 628 aa11.74□□□□□ -0.53
PDPN-204ENST00000475043 MKRN3Q13064 507 aaKnown RBP11.74□□□□□ -0.53
PDPN-204ENST00000475043 MOB2Q70IA6 237 aa11.74□□□□□ -0.53
PDPN-204ENST00000475043 FBXO33Q7Z6M2 555 aa11.74□□□□□ -0.53
PDPN-204ENST00000475043 ZBED3Q96IU2 234 aaPredicted RBP11.74□□□□□ -0.53
PDPN-204ENST00000475043 TSKSQ9UJT2 592 aa11.74□□□□□ -0.53
PDPN-204ENST00000475043 TTF2Q9UNY4 1162 aaKnown RBP11.74□□□□□ -0.53
PDPN-204ENST00000475043 HSPA8P11142 646 aaKnown RBP11.73□□□□□ -0.53
PDPN-204ENST00000475043 FKBP1BP68106 108 aa11.73□□□□□ -0.53
PDPN-204ENST00000475043 PRKG1Q13976 671 aa11.73□□□□□ -0.53
PDPN-204ENST00000475043 ZKSCAN2Q63HK3 967 aa11.73□□□□□ -0.53
PDPN-204ENST00000475043 ZBED9Q6R2W3 1325 aa11.73□□□□□ -0.53
PDPN-204ENST00000475043 ATG9AQ7Z3C6 839 aa11.73□□□□□ -0.53
PDPN-204ENST00000475043 MTMR14Q8NCE2 650 aa11.73□□□□□ -0.53
PDPN-204ENST00000475043 LPIN2Q92539 896 aa11.73□□□□□ -0.53
PDPN-204ENST00000475043 PRMT6Q96LA8 375 aaPredicted RBP11.73□□□□□ -0.53
PDPN-204ENST00000475043 VEZTQ9HBM0 779 aa11.73□□□□□ -0.53
PDPN-204ENST00000475043 PRDM10Q9NQV6 1147 aa11.73□□□□□ -0.53
PDPN-204ENST00000475043 CEP126Q9P2H0 1117 aa11.73□□□□□ -0.53
PDPN-204ENST00000475043 PA2G4Q9UQ80 394 aaKnown RBP11.73□□□□□ -0.53
PDPN-204ENST00000475043 FAM155AB1AL88 458 aaPredicted RBP11.72□□□□□ -0.53
PDPN-204ENST00000475043 UBE2Q2LH0YL09 131 aa11.72□□□□□ -0.53
PDPN-204ENST00000475043 SRGAP3O43295 1099 aa11.72□□□□□ -0.53
PDPN-204ENST00000475043 CIAO1O76071 339 aa11.72□□□□□ -0.53
PDPN-204ENST00000475043 FGFR2P21802 821 aa11.72□□□□□ -0.53
PDPN-204ENST00000475043 IL15P40933 162 aaPredicted RBP11.72□□□□□ -0.53
PDPN-204ENST00000475043 ATP2B3Q16720 1220 aa11.72□□□□□ -0.53
PDPN-204ENST00000475043 LCE2DQ5TA82 110 aaPredicted RBP11.72□□□□□ -0.53
PDPN-204ENST00000475043 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
PDPN-204ENST00000475043 PDCD7Q8N8D1 485 aaKnown RBP11.72□□□□□ -0.53
PDPN-204ENST00000475043 ZIC5Q96T25 663 aa11.72□□□□□ -0.53
PDPN-204ENST00000475043 DEFB129Q9H1M3 183 aa11.72□□□□□ -0.53
PDPN-204ENST00000475043 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
PDPN-204ENST00000475043 COL1A1P02452 1464 aaPredicted RBP11.71□□□□□ -0.53
PDPN-204ENST00000475043 AKAP11Q9UKA4 1901 aa11.71□□□□□ -0.53
PDPN-204ENST00000475043 SLC10A3P09131 477 aa11.71□□□□□ -0.53
PDPN-204ENST00000475043 CRKP46108 304 aa11.71□□□□□ -0.53
PDPN-204ENST00000475043 KIF23Q02241 960 aaPredicted RBP11.71□□□□□ -0.53
PDPN-204ENST00000475043 FTSJ3Q8IY81 847 aaKnown RBP11.71□□□□□ -0.53
PDPN-204ENST00000475043 TMEM57Q8N5G2 664 aa11.71□□□□□ -0.53
PDPN-204ENST00000475043 SLAIN1Q8ND83 568 aa11.71□□□□□ -0.53
PDPN-204ENST00000475043 TBC1D22AQ8WUA7 517 aa11.71□□□□□ -0.53
PDPN-204ENST00000475043 FAM163AQ96GL9 167 aaPredicted RBP11.71□□□□□ -0.53
PDPN-204ENST00000475043 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.71□□□□□ -0.53
PDPN-204ENST00000475043 AOX1Q06278 1338 aa11.7□□□□□ -0.54
PDPN-204ENST00000475043 CA12O43570 354 aa11.7□□□□□ -0.54
PDPN-204ENST00000475043 GNAI2P04899 355 aa11.7□□□□□ -0.54
PDPN-204ENST00000475043 GRIK5Q16478 980 aa11.7□□□□□ -0.54
PDPN-204ENST00000475043 ARMC9Q7Z3E5 817 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms