RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 CAVIN4Q5BKX8 364 aa14.76□□□□□ -0.05
CLIP2-204ENST00000474962 NBPF12Q5TAG4 269 aaPredicted RBP14.76□□□□□ -0.05
CLIP2-204ENST00000474962 REM2Q8IYK8 340 aaPredicted RBP14.76□□□□□ -0.05
CLIP2-204ENST00000474962 TDRD3Q9H7E2 651 aaKnown RBP14.76□□□□□ -0.05
CLIP2-204ENST00000474962 SERPINA10Q9UK55 444 aa14.76□□□□□ -0.05
CLIP2-204ENST00000474962 HDAC5Q9UQL6 1122 aa14.76□□□□□ -0.05
CLIP2-204ENST00000474962 A0A1B0GUL6 1792 aa14.75□□□□□ -0.05
CLIP2-204ENST00000474962 PAPPA2Q9BXP8 1791 aa14.75□□□□□ -0.05
CLIP2-204ENST00000474962 EYA2O00167 538 aa14.75□□□□□ -0.05
CLIP2-204ENST00000474962 TBC1D8O95759 1140 aa14.75□□□□□ -0.05
CLIP2-204ENST00000474962 FGFR2P21802 821 aa14.75□□□□□ -0.05
CLIP2-204ENST00000474962 TM4SF4P48230 202 aa14.75□□□□□ -0.05
CLIP2-204ENST00000474962 ATG9AQ7Z3C6 839 aa14.75□□□□□ -0.05
CLIP2-204ENST00000474962 SLC10A4Q96EP9 437 aa14.75□□□□□ -0.05
CLIP2-204ENST00000474962 ZNF70Q9UC06 446 aaPredicted RBP14.75□□□□□ -0.05
CLIP2-204ENST00000474962 USP2O75604 605 aaPredicted RBP14.74□□□□□ -0.05
CLIP2-204ENST00000474962 UBTFL1P0CB47 393 aaPredicted RBP14.74□□□□□ -0.05
CLIP2-204ENST00000474962 CRKP46108 304 aa14.74□□□□□ -0.05
CLIP2-204ENST00000474962 SUPT20HL1Q3ZLR7 823 aa14.74□□□□□ -0.05
CLIP2-204ENST00000474962 SPRYD7Q5W111 196 aa14.74□□□□□ -0.05
CLIP2-204ENST00000474962 INTS3Q68E01 1043 aaKnown RBP14.74□□□□□ -0.05
CLIP2-204ENST00000474962 ITPRIPQ8IWB1 547 aa14.74□□□□□ -0.05
CLIP2-204ENST00000474962 CLMNQ96JQ2 1002 aa14.74□□□□□ -0.05
CLIP2-204ENST00000474962 SIL1Q9H173 461 aa14.74□□□□□ -0.05
CLIP2-204ENST00000474962 PPP1R12BO60237 982 aaPredicted RBP14.73□□□□□ -0.05
CLIP2-204ENST00000474962 PUM3Q15397 648 aaKnown RBP14.73□□□□□ -0.05
CLIP2-204ENST00000474962 MAP3K11Q16584 847 aa14.73□□□□□ -0.05
CLIP2-204ENST00000474962 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
CLIP2-204ENST00000474962 CDAN1Q8IWY9 1227 aa14.73□□□□□ -0.05
CLIP2-204ENST00000474962 PPP2R3BQ9Y5P8 575 aa14.73□□□□□ -0.05
CLIP2-204ENST00000474962 LRRFIP2Q9Y608 721 aaKnown RBP14.73□□□□□ -0.05
CLIP2-204ENST00000474962 TCP10L2B9ZVM9 353 aa14.72□□□□□ -0.05
CLIP2-204ENST00000474962 IFIT1P09914 478 aaKnown RBP14.72□□□□□ -0.05
CLIP2-204ENST00000474962 TMEM57Q8N5G2 664 aa14.72□□□□□ -0.05
CLIP2-204ENST00000474962 MEIS3Q99687 375 aa14.72□□□□□ -0.05
CLIP2-204ENST00000474962 R3HDMLQ9H3Y0 253 aa14.72□□□□□ -0.05
CLIP2-204ENST00000474962 CHMP4BQ9H444 224 aaKnown RBP14.72□□□□□ -0.05
CLIP2-204ENST00000474962 PA2G4Q9UQ80 394 aaKnown RBP14.72□□□□□ -0.05
CLIP2-204ENST00000474962 TNNQ9UQP3 1299 aa14.72□□□□□ -0.05
CLIP2-204ENST00000474962 AKAP11Q9UKA4 1901 aa14.71□□□□□ -0.05
CLIP2-204ENST00000474962 GNAI3P08754 354 aa14.71□□□□□ -0.05
CLIP2-204ENST00000474962 CACNB3P54284 484 aa14.71□□□□□ -0.05
CLIP2-204ENST00000474962 RRP1P56182 461 aaKnown RBP14.71□□□□□ -0.05
CLIP2-204ENST00000474962 PDE3AQ14432 1141 aa14.71□□□□□ -0.05
CLIP2-204ENST00000474962 PANK1Q8TE04 598 aa14.71□□□□□ -0.05
CLIP2-204ENST00000474962 TBC1D22AQ8WUA7 517 aa14.71□□□□□ -0.05
CLIP2-204ENST00000474962 LPIN2Q92539 896 aa14.71□□□□□ -0.05
CLIP2-204ENST00000474962 TEPSINQ96N21 525 aa14.71□□□□□ -0.05
CLIP2-204ENST00000474962 TMEM39BQ9GZU3 492 aa14.71□□□□□ -0.05
CLIP2-204ENST00000474962 PCDH10Q9P2E7 1040 aa14.71□□□□□ -0.05
CLIP2-204ENST00000474962 SUPT16HQ9Y5B9 1047 aaKnown RBP14.71□□□□□ -0.05
CLIP2-204ENST00000474962 SSC5DA1L4H1 1573 aa14.71□□□□□ -0.05
CLIP2-204ENST00000474962 SLC5A1P13866 664 aa14.7□□□□□ -0.06
CLIP2-204ENST00000474962 MRIQ9BWK5 157 aa14.7□□□□□ -0.06
CLIP2-204ENST00000474962 CEP126Q9P2H0 1117 aa14.7□□□□□ -0.06
CLIP2-204ENST00000474962 CIAO1O76071 339 aa14.69□□□□□ -0.06
CLIP2-204ENST00000474962 RLBP1P12271 317 aa14.69□□□□□ -0.06
CLIP2-204ENST00000474962 GJA5P36382 358 aa14.69□□□□□ -0.06
CLIP2-204ENST00000474962 IREB2P48200 963 aaKnown RBP14.69□□□□□ -0.06
CLIP2-204ENST00000474962 HDLBPQ00341 1268 aaKnown RBP14.69□□□□□ -0.06
CLIP2-204ENST00000474962 SREBF2Q12772 1141 aa14.69□□□□□ -0.06
CLIP2-204ENST00000474962 TNFAIP1Q13829 316 aa14.69□□□□□ -0.06
CLIP2-204ENST00000474962 APOBEC3HQ6NTF7 200 aaKnown RBP14.69□□□□□ -0.06
CLIP2-204ENST00000474962 ZNF296Q8WUU4 475 aaPredicted RBP14.69□□□□□ -0.06
CLIP2-204ENST00000474962 TEKT1Q969V4 418 aa14.69□□□□□ -0.06
CLIP2-204ENST00000474962 WNK4Q96J92 1243 aa14.69□□□□□ -0.06
CLIP2-204ENST00000474962 DDX19BQ9UMR2 479 aa14.69□□□□□ -0.06
CLIP2-204ENST00000474962 COG6Q9Y2V7 657 aa14.69□□□□□ -0.06
CLIP2-204ENST00000474962 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
CLIP2-204ENST00000474962 COL1A1P02452 1464 aaPredicted RBP14.69□□□□□ -0.06
CLIP2-204ENST00000474962 GPR25O00155 361 aa14.68□□□□□ -0.06
CLIP2-204ENST00000474962 TIMM10P62072 90 aa14.68□□□□□ -0.06
CLIP2-204ENST00000474962 ATP2B3Q16720 1220 aa14.68□□□□□ -0.06
CLIP2-204ENST00000474962 IFNL1Q8IU54 200 aa14.68□□□□□ -0.06
CLIP2-204ENST00000474962 ZDHHC15Q96MV8 337 aa14.68□□□□□ -0.06
CLIP2-204ENST00000474962 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
CLIP2-204ENST00000474962 TNRC18O15417 2968 aaPredicted RBP14.67□□□□□ -0.06
CLIP2-204ENST00000474962 UNCXA6NJT0 531 aa14.67□□□□□ -0.06
CLIP2-204ENST00000474962 ADORA1P30542 326 aa14.67□□□□□ -0.06
CLIP2-204ENST00000474962 IL15P40933 162 aaPredicted RBP14.67□□□□□ -0.06
CLIP2-204ENST00000474962 INHBEP58166 350 aa14.67□□□□□ -0.06
CLIP2-204ENST00000474962 MVPQ14764 893 aaKnown RBP14.67□□□□□ -0.06
CLIP2-204ENST00000474962 CTU1Q7Z7A3 348 aaKnown RBP14.67□□□□□ -0.06
CLIP2-204ENST00000474962 ANKRD13AQ8IZ07 590 aa14.67□□□□□ -0.06
CLIP2-204ENST00000474962 WDR66Q8TBY9 1149 aa14.67□□□□□ -0.06
CLIP2-204ENST00000474962 ELP3Q9H9T3 547 aa14.67□□□□□ -0.06
CLIP2-204ENST00000474962 COPRSQ9NQ92 184 aa14.67□□□□□ -0.06
CLIP2-204ENST00000474962 SUGT1Q9Y2Z0 365 aa14.67□□□□□ -0.06
CLIP2-204ENST00000474962 CENPFP49454 3210 aa14.67□□□□□ -0.06
CLIP2-204ENST00000474962 MANSC4A6NHS7 340 aaPredicted RBP14.66□□□□□ -0.06
CLIP2-204ENST00000474962 IGF2BP3O00425 579 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLIP2-204ENST00000474962 SRGAP3O43295 1099 aa14.66□□□□□ -0.06
CLIP2-204ENST00000474962 GNAI2P04899 355 aa14.66□□□□□ -0.06
CLIP2-204ENST00000474962 ZBTB48P10074 688 aaPredicted RBP14.66□□□□□ -0.06
CLIP2-204ENST00000474962 PHKA1P46020 1223 aa14.66□□□□□ -0.06
CLIP2-204ENST00000474962 TNNI2P48788 182 aa14.66□□□□□ -0.06
CLIP2-204ENST00000474962 RGS19P49795 217 aa14.66□□□□□ -0.06
CLIP2-204ENST00000474962 HHIPL2Q6UWX4 724 aa14.66□□□□□ -0.06
CLIP2-204ENST00000474962 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.66□□□□□ -0.06
CLIP2-204ENST00000474962 PTPN18Q99952 460 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms