RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 MAST3O60307 1309 aa18.81■□□□□ 0.6
VARS-223ENST00000474643 CRKP46108 304 aa18.81■□□□□ 0.6
VARS-223ENST00000474643 BCAMP50895 628 aa18.81■□□□□ 0.6
VARS-223ENST00000474643 ATF7IPQ6VMQ6 1270 aa18.81■□□□□ 0.6
VARS-223ENST00000474643 CLUAP1Q96AJ1 413 aa18.81■□□□□ 0.6
VARS-223ENST00000474643 ZNF70Q9UC06 446 aaPredicted RBP18.81■□□□□ 0.6
VARS-223ENST00000474643 TCP10L2B9ZVM9 353 aa18.8■□□□□ 0.6
VARS-223ENST00000474643 TBC1D8O95759 1140 aa18.8■□□□□ 0.6
VARS-223ENST00000474643 SPDYE2Q495Y8 402 aa18.8■□□□□ 0.6
VARS-223ENST00000474643 NBPF12Q5TAG4 269 aaPredicted RBP18.8■□□□□ 0.6
VARS-223ENST00000474643 VGLL2Q8N8G2 317 aa18.8■□□□□ 0.6
VARS-223ENST00000474643 LPIN2Q92539 896 aa18.8■□□□□ 0.6
VARS-223ENST00000474643 GNL3LQ9NVN8 582 aaKnown RBP18.8■□□□□ 0.6
VARS-223ENST00000474643 CEP126Q9P2H0 1117 aa18.8■□□□□ 0.6
VARS-223ENST00000474643 ARAP2Q8WZ64 1704 aa18.8■□□□□ 0.6
VARS-223ENST00000474643 MANSC4A6NHS7 340 aaPredicted RBP18.79■□□□□ 0.6
VARS-223ENST00000474643 SPRYD7Q5W111 196 aa18.79■□□□□ 0.6
VARS-223ENST00000474643 CTU1Q7Z7A3 348 aaKnown RBP18.79■□□□□ 0.6
VARS-223ENST00000474643 FTSJ3Q8IY81 847 aaKnown RBP18.79■□□□□ 0.6
VARS-223ENST00000474643 LRRFIP2Q9Y608 721 aaKnown RBP18.79■□□□□ 0.6
VARS-223ENST00000474643 ALDH1A1P00352 501 aa18.78■□□□□ 0.6
VARS-223ENST00000474643 TRIM27P14373 513 aa18.78■□□□□ 0.6
VARS-223ENST00000474643 ATP2B3Q16720 1220 aa18.78■□□□□ 0.6
VARS-223ENST00000474643 LDLRAD1Q5T700 205 aa18.78■□□□□ 0.6
VARS-223ENST00000474643 ANKRD13AQ8IZ07 590 aa18.78■□□□□ 0.6
VARS-223ENST00000474643 ZBTB48P10074 688 aaPredicted RBP18.77■□□□□ 0.6
VARS-223ENST00000474643 TM4SF4P48230 202 aa18.77■□□□□ 0.6
VARS-223ENST00000474643 INHBEP58166 350 aa18.77■□□□□ 0.6
VARS-223ENST00000474643 WDR66Q8TBY9 1149 aa18.77■□□□□ 0.6
VARS-223ENST00000474643 CLMNQ96JQ2 1002 aa18.77■□□□□ 0.6
VARS-223ENST00000474643 FBXO3Q9UK99 471 aa18.77■□□□□ 0.6
VARS-223ENST00000474643 UNCXA6NJT0 531 aa18.76■□□□□ 0.59
VARS-223ENST00000474643 CIAO1O76071 339 aa18.76■□□□□ 0.59
VARS-223ENST00000474643 GNAI3P08754 354 aa18.76■□□□□ 0.59
VARS-223ENST00000474643 IL15P40933 162 aaPredicted RBP18.76■□□□□ 0.59
VARS-223ENST00000474643 HDLBPQ00341 1268 aaKnown RBP18.76■□□□□ 0.59
VARS-223ENST00000474643 MAP3K11Q16584 847 aa18.76■□□□□ 0.59
VARS-223ENST00000474643 INTS3Q68E01 1043 aaKnown RBP18.76■□□□□ 0.59
VARS-223ENST00000474643 OTUD7BQ6GQQ9 843 aa18.76■□□□□ 0.59
VARS-223ENST00000474643 HOOK2Q96ED9 719 aa18.76■□□□□ 0.59
VARS-223ENST00000474643 WNK4Q96J92 1243 aa18.76■□□□□ 0.59
VARS-223ENST00000474643 TNNQ9UQP3 1299 aa18.76■□□□□ 0.59
VARS-223ENST00000474643 SUGT1Q9Y2Z0 365 aa18.76■□□□□ 0.59
VARS-223ENST00000474643 CSADQ9Y600 493 aa18.76■□□□□ 0.59
VARS-223ENST00000474643 SSC5DA1L4H1 1573 aa18.76■□□□□ 0.59
VARS-223ENST00000474643 AOX1Q06278 1338 aa18.75■□□□□ 0.59
VARS-223ENST00000474643 FGFR2P21802 821 aa18.75■□□□□ 0.59
VARS-223ENST00000474643 MLLT1Q03111 559 aaPredicted RBP18.75■□□□□ 0.59
VARS-223ENST00000474643 ZNF296Q8WUU4 475 aaPredicted RBP18.75■□□□□ 0.59
VARS-223ENST00000474643 MEIS3Q99687 375 aa18.75■□□□□ 0.59
VARS-223ENST00000474643 TMEM39BQ9GZU3 492 aa18.75■□□□□ 0.59
VARS-223ENST00000474643 RCAN3Q9UKA8 241 aa18.75■□□□□ 0.59
VARS-223ENST00000474643 RFX5P48382 616 aaPredicted RBP18.74■□□□□ 0.59
VARS-223ENST00000474643 GRIK5Q16478 980 aa18.74■□□□□ 0.59
VARS-223ENST00000474643 ELP3Q9H9T3 547 aa18.74■□□□□ 0.59
VARS-223ENST00000474643 GPR25O00155 361 aa18.73■□□□□ 0.59
VARS-223ENST00000474643 SRGAP3O43295 1099 aa18.73■□□□□ 0.59
VARS-223ENST00000474643 FKTNO75072 461 aa18.73■□□□□ 0.59
VARS-223ENST00000474643 USP2O75604 605 aaPredicted RBP18.73■□□□□ 0.59
VARS-223ENST00000474643 CACNB3P54284 484 aa18.73■□□□□ 0.59
VARS-223ENST00000474643 PKN2Q16513 984 aaKnown RBP18.73■□□□□ 0.59
VARS-223ENST00000474643 ATG9AQ7Z3C6 839 aa18.73■□□□□ 0.59
VARS-223ENST00000474643 ZDHHC15Q96MV8 337 aa18.73■□□□□ 0.59
VARS-223ENST00000474643 PA2G4Q9UQ80 394 aaKnown RBP18.73■□□□□ 0.59
VARS-223ENST00000474643 MYH13Q9UKX3 1938 aa18.72■□□□□ 0.59
VARS-223ENST00000474643 LDHBP07195 334 aaKnown RBP18.72■□□□□ 0.59
VARS-223ENST00000474643 IFNL1Q8IU54 200 aa18.72■□□□□ 0.59
VARS-223ENST00000474643 ITPRIPQ8IWB1 547 aa18.72■□□□□ 0.59
VARS-223ENST00000474643 TMEM57Q8N5G2 664 aa18.72■□□□□ 0.59
VARS-223ENST00000474643 OPTNQ96CV9 577 aa18.72■□□□□ 0.59
VARS-223ENST00000474643 WDHD1O75717 1129 aaPredicted RBP18.71■□□□□ 0.59
VARS-223ENST00000474643 MS4A1P11836 297 aa18.71■□□□□ 0.59
VARS-223ENST00000474643 ZGPATQ8N5A5 531 aaKnown RBP18.71■□□□□ 0.59
VARS-223ENST00000474643 DENND2AQ9ULE3 1009 aa18.71■□□□□ 0.59
VARS-223ENST00000474643 MAP3K9P80192 1104 aa18.7■□□□□ 0.58
VARS-223ENST00000474643 GORABQ5T7V8 394 aa18.7■□□□□ 0.58
VARS-223ENST00000474643 DCAF15Q66K64 600 aa18.7■□□□□ 0.58
VARS-223ENST00000474643 HHIPL2Q6UWX4 724 aa18.7■□□□□ 0.58
VARS-223ENST00000474643 MRIQ9BWK5 157 aa18.7■□□□□ 0.58
VARS-223ENST00000474643 AKAP2Q9Y2D5 859 aa18.7■□□□□ 0.58
VARS-223ENST00000474643 SEMA3EO15041 775 aa18.69■□□□□ 0.58
VARS-223ENST00000474643 GNAI2P04899 355 aa18.69■□□□□ 0.58
VARS-223ENST00000474643 FAM83AQ86UY5 434 aa18.69■□□□□ 0.58
VARS-223ENST00000474643 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.69■□□□□ 0.58
VARS-223ENST00000474643 WRNIP1Q96S55 665 aa18.69■□□□□ 0.58
VARS-223ENST00000474643 COPRSQ9NQ92 184 aa18.69■□□□□ 0.58
VARS-223ENST00000474643 PHKA1P46020 1223 aa18.68■□□□□ 0.58
VARS-223ENST00000474643 SOX10P56693 466 aa18.68■□□□□ 0.58
VARS-223ENST00000474643 VGLL4Q14135 290 aa18.68■□□□□ 0.58
VARS-223ENST00000474643 NOM1Q5C9Z4 860 aaKnown RBP18.68■□□□□ 0.58
VARS-223ENST00000474643 FKBP1CQ5VVH2 108 aa18.68■□□□□ 0.58
VARS-223ENST00000474643 DZIP1Q86YF9 867 aaKnown RBP18.68■□□□□ 0.58
VARS-223ENST00000474643 CDAN1Q8IWY9 1227 aa18.68■□□□□ 0.58
VARS-223ENST00000474643 OTUD5Q96G74 571 aa18.68■□□□□ 0.58
VARS-223ENST00000474643 TEPSINQ96N21 525 aa18.68■□□□□ 0.58
VARS-223ENST00000474643 MVPQ14764 893 aaKnown RBP18.67■□□□□ 0.58
VARS-223ENST00000474643 DIXDC1Q155Q3 683 aa18.67■□□□□ 0.58
VARS-223ENST00000474643 APOBEC3HQ6NTF7 200 aaKnown RBP18.67■□□□□ 0.58
VARS-223ENST00000474643 SLF2Q8IX21 1173 aa18.67■□□□□ 0.58
VARS-223ENST00000474643 NEUROD6Q96NK8 337 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms