RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 CD163Q86VB7 1156 aa6.66□□□□□ -1.34
MDM2-216ENST00000471946 KRTAP4-6Q9BYQ5 205 aa6.66□□□□□ -1.34
MDM2-216ENST00000471946 USP21Q9UK80 565 aa6.66□□□□□ -1.34
MDM2-216ENST00000471946 TTF2Q9UNY4 1162 aaKnown RBP6.66□□□□□ -1.34
MDM2-216ENST00000471946 C1QTNF9BB2RNN3 333 aa6.65□□□□□ -1.34
MDM2-216ENST00000471946 WISP1O95388 367 aa6.65□□□□□ -1.34
MDM2-216ENST00000471946 ECEL1O95672 775 aa6.65□□□□□ -1.34
MDM2-216ENST00000471946 CHRNA4P43681 627 aa6.65□□□□□ -1.34
MDM2-216ENST00000471946 PPP2R3AQ06190 1150 aa6.65□□□□□ -1.34
MDM2-216ENST00000471946 LDLRAD1Q5T700 205 aa6.65□□□□□ -1.34
MDM2-216ENST00000471946 TMEM130Q8N3G9 435 aa6.65□□□□□ -1.34
MDM2-216ENST00000471946 DDX54Q8TDD1 881 aaKnown RBP6.65□□□□□ -1.34
MDM2-216ENST00000471946 STK35Q8TDR2 534 aa6.65□□□□□ -1.34
MDM2-216ENST00000471946 UBASH3BQ8TF42 649 aa6.65□□□□□ -1.34
MDM2-216ENST00000471946 TRIM56Q9BRZ2 755 aaKnown RBP6.65□□□□□ -1.34
MDM2-216ENST00000471946 BACH2Q9BYV9 841 aa6.65□□□□□ -1.34
MDM2-216ENST00000471946 CEP44Q9C0F1 390 aa6.65□□□□□ -1.34
MDM2-216ENST00000471946 MRPL18Q9H0U6 180 aaKnown RBP6.65□□□□□ -1.34
MDM2-216ENST00000471946 PPM1HQ9ULR3 514 aa6.65□□□□□ -1.34
MDM2-216ENST00000471946 ENC1O14682 589 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 PAGE1O75459 146 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 DLGAP3O95886 979 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 CYP11A1P05108 521 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 CTSBP07858 339 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 BMP6P22004 513 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 MAOBP27338 520 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 POU4F3Q15319 338 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 PLA2G4EQ3MJ16 856 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 KIAA1211Q6ZU35 1233 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 DCAF11Q8TEB1 546 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 ANKRD24Q8TF21 1146 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 MRRFQ96E11 262 aaKnown RBP6.64□□□□□ -1.35
MDM2-216ENST00000471946 NACC1Q96RE7 527 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 USP26Q9BXU7 913 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 ZC3H12CQ9C0D7 883 aaKnown RBP6.64□□□□□ -1.35
MDM2-216ENST00000471946 NRSN2Q9GZP1 204 aa6.64□□□□□ -1.35
MDM2-216ENST00000471946 KIAA1522Q9P206 1035 aaPredicted RBP6.64□□□□□ -1.35
MDM2-216ENST00000471946 ARNTP27540 789 aa6.63□□□□□ -1.35
MDM2-216ENST00000471946 IREB2P48200 963 aaKnown RBP6.63□□□□□ -1.35
MDM2-216ENST00000471946 NRG1Q02297 640 aaPredicted RBP6.63□□□□□ -1.35
MDM2-216ENST00000471946 SV2BQ7L1I2 683 aa6.63□□□□□ -1.35
MDM2-216ENST00000471946 AGGF1Q8N302 714 aaeCLIP6.63□□□□□ -1.35
MDM2-216ENST00000471946 TMEM87AQ8NBN3 555 aa6.63□□□□□ -1.35
MDM2-216ENST00000471946 WFDC12Q8WWY7 111 aa6.63□□□□□ -1.35
MDM2-216ENST00000471946 BCL11AQ9H165 835 aa6.63□□□□□ -1.35
MDM2-216ENST00000471946 LOC100289279A0A1B0GTE1 492 aa6.62□□□□□ -1.35
MDM2-216ENST00000471946 F8W735 103 aaPredicted RBP6.62□□□□□ -1.35
MDM2-216ENST00000471946 CELA3AP09093 270 aa6.62□□□□□ -1.35
MDM2-216ENST00000471946 NME2P22392 152 aa6.62□□□□□ -1.35
MDM2-216ENST00000471946 ITGAEP38570 1179 aa6.62□□□□□ -1.35
MDM2-216ENST00000471946 RBM25P49756 843 aaKnown RBP6.62□□□□□ -1.35
MDM2-216ENST00000471946 ADGRE1Q14246 886 aa6.62□□□□□ -1.35
MDM2-216ENST00000471946 CCDC85BQ15834 202 aaPredicted RBP6.62□□□□□ -1.35
MDM2-216ENST00000471946 EXOSC6Q5RKV6 272 aaKnown RBP6.62□□□□□ -1.35
MDM2-216ENST00000471946 MPRIPQ6WCQ1 1025 aa6.62□□□□□ -1.35
MDM2-216ENST00000471946 ACAD11Q709F0 780 aa6.62□□□□□ -1.35
MDM2-216ENST00000471946 GRIN3AQ8TCU5 1115 aa6.62□□□□□ -1.35
MDM2-216ENST00000471946 CRELD1Q96HD1 420 aa6.62□□□□□ -1.35
MDM2-216ENST00000471946 CORO1BQ9BR76 489 aa6.62□□□□□ -1.35
MDM2-216ENST00000471946 AKTIPQ9H8T0 292 aa6.62□□□□□ -1.35
MDM2-216ENST00000471946 EIF4EBP3O60516 100 aaPredicted RBP6.61□□□□□ -1.35
MDM2-216ENST00000471946 NOS3P29474 1203 aa6.61□□□□□ -1.35
MDM2-216ENST00000471946 AP3B2Q13367 1082 aa6.61□□□□□ -1.35
MDM2-216ENST00000471946 MBTPS1Q14703 1052 aa6.61□□□□□ -1.35
MDM2-216ENST00000471946 MAP3K11Q16584 847 aa6.61□□□□□ -1.35
MDM2-216ENST00000471946 TSNAXIP1Q2TAA8 658 aa6.61□□□□□ -1.35
MDM2-216ENST00000471946 RASIP1Q5U651 963 aa6.61□□□□□ -1.35
MDM2-216ENST00000471946 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.61□□□□□ -1.35
MDM2-216ENST00000471946 PDZD3Q86UT5 571 aa6.61□□□□□ -1.35
MDM2-216ENST00000471946 SULF2Q8IWU5 870 aa6.61□□□□□ -1.35
MDM2-216ENST00000471946 RUSC1Q9BVN2 902 aa6.61□□□□□ -1.35
MDM2-216ENST00000471946 CBX8Q9HC52 389 aa6.61□□□□□ -1.35
MDM2-216ENST00000471946 MEGF11A6BM72 1044 aa6.6□□□□□ -1.35
MDM2-216ENST00000471946 ST13P50502 369 aaKnown RBP6.6□□□□□ -1.35
MDM2-216ENST00000471946 KCNB2Q92953 911 aa6.6□□□□□ -1.35
MDM2-216ENST00000471946 WDR89Q96FK6 387 aaPredicted RBP6.6□□□□□ -1.35
MDM2-216ENST00000471946 CCDC86Q9H6F5 360 aaKnown RBP6.6□□□□□ -1.35
MDM2-216ENST00000471946 GSTP1P09211 210 aaKnown RBP6.59□□□□□ -1.35
MDM2-216ENST00000471946 LIG1P18858 919 aa6.59□□□□□ -1.35
MDM2-216ENST00000471946 VAMP1P23763 118 aa6.59□□□□□ -1.35
MDM2-216ENST00000471946 GATA4P43694 442 aa6.59□□□□□ -1.35
MDM2-216ENST00000471946 PCNX4Q63HM2 1172 aa6.59□□□□□ -1.35
MDM2-216ENST00000471946 SPOCK3Q9BQ16 436 aa6.59□□□□□ -1.35
MDM2-216ENST00000471946 NOC4LQ9BVI4 516 aaKnown RBP6.59□□□□□ -1.35
MDM2-216ENST00000471946 EMILIN2Q9BXX0 1053 aa6.59□□□□□ -1.35
MDM2-216ENST00000471946 TMPRSS13Q9BYE2 586 aa6.59□□□□□ -1.35
MDM2-216ENST00000471946 SAMM50Q9Y512 469 aa6.59□□□□□ -1.35
MDM2-216ENST00000471946 F6X3S4 739 aa6.58□□□□□ -1.36
MDM2-216ENST00000471946 MSTNO14793 375 aa6.58□□□□□ -1.36
MDM2-216ENST00000471946 ZNF252P-AS1Q0IIN9 211 aa6.58□□□□□ -1.36
MDM2-216ENST00000471946 PDE3AQ14432 1141 aa6.58□□□□□ -1.36
MDM2-216ENST00000471946 NUTM2GQ5VZR2 741 aa6.58□□□□□ -1.36
MDM2-216ENST00000471946 MAP1SQ66K74 1059 aaPredicted RBP6.58□□□□□ -1.36
MDM2-216ENST00000471946 TTBK2Q6IQ55 1244 aa6.58□□□□□ -1.36
MDM2-216ENST00000471946 TXNRD3Q86VQ6 643 aa6.58□□□□□ -1.36
MDM2-216ENST00000471946 C12orf50Q8NA57 414 aaPredicted RBP6.58□□□□□ -1.36
MDM2-216ENST00000471946 UBL7Q96S82 380 aaPredicted RBP6.58□□□□□ -1.36
MDM2-216ENST00000471946 RNF208Q9H0X6 261 aa6.58□□□□□ -1.36
MDM2-216ENST00000471946 RAD18Q9NS91 495 aa6.58□□□□□ -1.36
MDM2-216ENST00000471946 CYP8B1Q9UNU6 501 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms