RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 AIDAQ96BJ3 306 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 CNTNAP3BQ96NU0 1288 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 NLRP3Q96P20 1036 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 CNTNAP3Q9BZ76 1288 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 ZIM2Q9NZV7 527 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 MCM8Q9UJA3 840 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 ROBO2Q9HCK4 1378 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 GSG1L2A8MUP6 293 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 UPK3BL1B0FP48 263 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 UPK3BL2E5RIL1 263 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 PLIN1O60240 522 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 KRT18P05783 430 aaKnown RBP8.02□□□□□ -1.13
NF1-208ENST00000471572 PABPC4Q13310 644 aaKnown RBP eCLIP8.02□□□□□ -1.13
NF1-208ENST00000471572 LONRF3Q496Y0 759 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 CT47A1Q5JQC4 288 aaPredicted RBP8.02□□□□□ -1.13
NF1-208ENST00000471572 PERM1Q5SV97 790 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 RBBP8NLQ8NC74 664 aaPredicted RBP8.02□□□□□ -1.13
NF1-208ENST00000471572 NECAB3Q96P71 396 aaPredicted RBP8.02□□□□□ -1.13
NF1-208ENST00000471572 ARPC5LQ9BPX5 153 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 LIN7BQ9HAP6 207 aa8.02□□□□□ -1.13
NF1-208ENST00000471572 MYO15BQ96JP2 1530 aa8.01□□□□□ -1.13
NF1-208ENST00000471572 AKAP10O43572 662 aa8.01□□□□□ -1.13
NF1-208ENST00000471572 ATF3P18847 181 aa8.01□□□□□ -1.13
NF1-208ENST00000471572 ATP4AP20648 1035 aa8.01□□□□□ -1.13
NF1-208ENST00000471572 GUCY2FP51841 1108 aa8.01□□□□□ -1.13
NF1-208ENST00000471572 AKAP4Q5JQC9 854 aa8.01□□□□□ -1.13
NF1-208ENST00000471572 REC114Q7Z4M0 266 aa8.01□□□□□ -1.13
NF1-208ENST00000471572 SAMD3Q8N6K7 520 aa8.01□□□□□ -1.13
NF1-208ENST00000471572 ENAMQ9NRM1 1142 aa8.01□□□□□ -1.13
NF1-208ENST00000471572 ZDHHC3Q9NYG2 299 aa8.01□□□□□ -1.13
NF1-208ENST00000471572 EDN3P14138 238 aa8□□□□□ -1.13
NF1-208ENST00000471572 ACPPP15309 386 aa8□□□□□ -1.13
NF1-208ENST00000471572 GRIA4P48058 902 aa8□□□□□ -1.13
NF1-208ENST00000471572 NLRP13Q86W25 1043 aa8□□□□□ -1.13
NF1-208ENST00000471572 CCNJLQ8IV13 435 aa8□□□□□ -1.13
NF1-208ENST00000471572 FAM178BQ8IXR5 827 aa8□□□□□ -1.13
NF1-208ENST00000471572 MYO1HQ8N1T3 1032 aa8□□□□□ -1.13
NF1-208ENST00000471572 TTC8Q8TAM2 541 aa8□□□□□ -1.13
NF1-208ENST00000471572 BSDC1Q9NW68 430 aaPredicted RBP8□□□□□ -1.13
NF1-208ENST00000471572 SOX5P35711 763 aa8□□□□□ -1.13
NF1-208ENST00000471572 ZNF165P49910 485 aa8□□□□□ -1.13
NF1-208ENST00000471572 TYRO3Q06418 890 aa8□□□□□ -1.13
NF1-208ENST00000471572 MPP2Q14168 576 aa8□□□□□ -1.13
NF1-208ENST00000471572 CWF19L2Q2TBE0 894 aaKnown RBP8□□□□□ -1.13
NF1-208ENST00000471572 NBPF1Q3BBV0 1214 aa8□□□□□ -1.13
NF1-208ENST00000471572 Q6ZVU0 165 aa8□□□□□ -1.13
NF1-208ENST00000471572 STRA8Q7Z7C7 330 aa8□□□□□ -1.13
NF1-208ENST00000471572 PMEPA1Q969W9 287 aa8□□□□□ -1.13
NF1-208ENST00000471572 ZNF395Q9H8N7 513 aaPredicted RBP8□□□□□ -1.13
NF1-208ENST00000471572 LAS1LQ9Y4W2 734 aaKnown RBP8□□□□□ -1.13
NF1-208ENST00000471572 A0A1W2PQH9 124 aa7.99□□□□□ -1.13
NF1-208ENST00000471572 RNF223E7ERA6 249 aa7.99□□□□□ -1.13
NF1-208ENST00000471572 IFRD1O00458 451 aaPredicted RBP7.99□□□□□ -1.13
NF1-208ENST00000471572 RASGRP1O95267 797 aa7.99□□□□□ -1.13
NF1-208ENST00000471572 BPNT1O95861 308 aa7.99□□□□□ -1.13
NF1-208ENST00000471572 EGFRP00533 1210 aa7.99□□□□□ -1.13
NF1-208ENST00000471572 MYL1P05976 194 aa7.99□□□□□ -1.13
NF1-208ENST00000471572 RPS26P62854 115 aaKnown RBP7.99□□□□□ -1.13
NF1-208ENST00000471572 SAFB2Q14151 953 aaKnown RBP eCLIP7.99□□□□□ -1.13
NF1-208ENST00000471572 CLEC4GQ6UXB4 293 aa7.99□□□□□ -1.13
NF1-208ENST00000471572 NYAP1Q6ZVC0 841 aa7.99□□□□□ -1.13
NF1-208ENST00000471572 REXO1Q8N1G1 1221 aaKnown RBP7.99□□□□□ -1.13
NF1-208ENST00000471572 GRIP2Q9C0E4 1043 aa7.99□□□□□ -1.13
NF1-208ENST00000471572 CEP44Q9C0F1 390 aa7.99□□□□□ -1.13
NF1-208ENST00000471572 SFMBT1Q9UHJ3 866 aa7.99□□□□□ -1.13
NF1-208ENST00000471572 METTL12A8MUP2 240 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 NEK2P51955 445 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 RELBQ01201 579 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 FAAP100Q0VG06 881 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 FOXD4Q12950 439 aaPredicted RBP7.98□□□□□ -1.13
NF1-208ENST00000471572 HDAC1Q13547 482 aaPredicted RBP7.98□□□□□ -1.13
NF1-208ENST00000471572 FOXB2Q5VYV0 432 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 LRRC69Q6ZNQ3 347 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 ANKRD13DQ6ZTN6 518 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 JARID2Q92833 1246 aaPredicted RBP7.98□□□□□ -1.13
NF1-208ENST00000471572 ZNF669Q96BR6 464 aaPredicted RBP7.98□□□□□ -1.13
NF1-208ENST00000471572 ZNF512BQ96KM6 892 aaPredicted RBP7.98□□□□□ -1.13
NF1-208ENST00000471572 HS3ST6Q96QI5 342 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 ZKSCAN3Q9BRR0 538 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 TARS2Q9BW92 718 aaKnown RBP7.98□□□□□ -1.13
NF1-208ENST00000471572 NACADO15069 1562 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 PRPF3O43395 683 aaKnown RBP7.98□□□□□ -1.13
NF1-208ENST00000471572 ST18O60284 1047 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 CILPO75339 1184 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 WDHD1O75717 1129 aaPredicted RBP7.98□□□□□ -1.13
NF1-208ENST00000471572 EYA4O95677 639 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 PHKA2P46019 1235 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 OS9Q13438 667 aaPredicted RBP7.98□□□□□ -1.13
NF1-208ENST00000471572 MTMR1Q13613 665 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 LHFPL2Q6ZUX7 228 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 RTFDC1Q9BY42 306 aaPredicted RBP7.98□□□□□ -1.13
NF1-208ENST00000471572 ANTXR1Q9H6X2 564 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 SEC31BQ9NQW1 1179 aa7.98□□□□□ -1.13
NF1-208ENST00000471572 TRPA1O75762 1119 aa7.97□□□□□ -1.13
NF1-208ENST00000471572 VPS72Q15906 364 aa7.97□□□□□ -1.13
NF1-208ENST00000471572 PPP4R4Q6NUP7 873 aa7.97□□□□□ -1.13
NF1-208ENST00000471572 TTC6Q86TZ1 520 aa7.97□□□□□ -1.13
NF1-208ENST00000471572 CCDC84Q86UT8 332 aaPredicted RBP7.97□□□□□ -1.13
NF1-208ENST00000471572 ATL2Q8NHH9 583 aa7.97□□□□□ -1.13
NF1-208ENST00000471572 PNISRQ8TF01 805 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms